Perca flavescens (yellow perch): 114560229
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Entry
114560229 CDS
T07494
Symbol
lrrc29
Name
(RefSeq) leucine-rich repeat-containing protein 29 isoform X1
KO
K10275
F-box and leucine-rich repeat protein 9
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflv04121
]
114560229 (lrrc29)
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
114560229 (lrrc29)
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Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_6
F-box-like
F-box
F-box_5
SAM_Ste50p
LRR_8
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
114560229
NCBI-ProteinID:
XP_028441260
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All DBs
Position
8:complement(4964204..4977028)
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AA seq
655 aa
AA seq
DB search
MEDCNWEDIIETPELPLEIIVYILSFLHASDRKEASLVCRSWYYASQDSQRKITFCFPAS
ASSLELIRGLSRKSRCGLIISQLDGFSMSRSLLLEVGLCLGSKLESLALPGSSVTEASLL
ALLPRLTSLRSLNLRGLNSLFMSGAFLSREEHRQQVRSALSGLEELDLSDIRYLSDLTFN
RLTGCTPRLRRLSLAGCHIAFEFDPYGGCPVGAVRDSSALLSLRNLRRFLTEQKSTLVSL
DLSRTSITPESLRTVAQVQDLVLEELCLHGCKELTDYSMEVLVKHQTSLQRLGISACTEL
TSRSVEAIAQGLKSLTHLSLSRDWRITEKGLADLLSVSSLRSLDLSECLHVSGTEIVNGL
TESSAARAQLETLNLKSCTYIRDLAVFSLTQLLGDTLRELDLTSCVNVTDLSVRAIATYL
QRLVVLRLGWCKEVTDWGLLGMVETARCEPDQETGDKGPRFTRTFGNMGFFKPPRLPFEE
RPKLVTQNDLHQFRQQAGASLLALSRLQELDLSACPKLTDSSITQVVHYPDLRRLSLSML
PEITDASLASVAWHCRSLTSLALSHCPGISDRGVAQAAPYLRRLQHLYLSCCNNITDRSL
LLLAQHCNRLKTLDISRCKNISVTAVDLLQSQLPFLENVHFKCIGGFDLTLTLND
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggaagactgtaattgggaggacattatagaaacacctgagctgcctctggagatcata
gtttacatcctgagctttctccacgcttcagacaggaaggaagcctcgctggtctgccgc
agctggtactatgccagtcaggactctcagaggaagatcaccttctgcttcccggcttca
gcctcgtccctggagctgatcaggggtctgagcagaaagtcccgctgcggtctgattatc
agccagctcgatggcttcagtatgtccagatcactgcttctggaggtgggtctgtgcttg
ggctctaagttggagagcttggccctgcctggtagcagtgtaacagaggcctctctgctg
gccctcctccctcgcctcacctccctccgcagcctcaacctccggggcctgaacagcctc
ttcatgtctggggctttcctctccagggaggaacacagacagcaggtcaggtcagctctg
tctggtctggaggagctggacctgtccgacatacgctacctctccgacctcaccttcaac
cggctcactggctgcaccccgcgcctccgccgcctctcgctggccggctgccatatcgcc
ttcgagttcgacccgtatggaggctgcccggtgggagctgttagggattcctcagcattg
ctgtcactgaggaacttgcggaggtttttaacggagcagaaatccacccttgtatcgctg
gacctcagcagaacctcgatcacccctgagtcactacgcacggtcgcacaggttcaggat
ttggtcttagaggaactgtgtctgcacggctgtaaggagctgaccgactactccatggag
gttctggtgaagcaccagacgagcctccagagactgggcatcagtgcctgcaccgagctg
accagcaggtctgtagaggccatagcacagggcctcaagtccctgacacacctctccttg
tcccgcgattggaggatcaccgaaaaaggcctggccgaccttctgtccgtgtcgtccctg
aggagtctggatctgtccgagtgtctgcacgtcagcgggacagagatagtgaacggcttg
acggaatccagtgctgccagagcacagctggagacactcaacctcaagagctgcacctac
attagggatcttgccgttttctctctcacccagcttcttggggatactctgcgtgagctg
gacttgacatcgtgcgtcaatgtgaccgacctgtcggtgcgcgccatagccacgtacctg
cagaggctggtggttctgcggctcggctggtgcaaagaagtcacagactggggtctgctg
gggatggtggaaacggccagatgtgagccggaccaggagacgggagacaagggtcccagg
ttcacccggaccttcggcaacatgggcttcttcaagcctccccgtctgccgttcgaggag
cgacccaagctggtgacccagaacgacctgcatcagttcagacagcaggctggagcttcg
ctcttagccctcagccggctgcaggagctggacctctcggcctgccccaaactcactgac
agcagcatcacacaggtggtgcattacccagacctccgccgcctgtctctctccatgctg
ccggagatcaccgacgccagcttggcgtcggtcgcctggcactgccgcagcctcaccagc
ctggcgctcagccactgcccggggatcagtgaccgcggagtggcccaggctgccccgtac
ctacgccggctgcagcatctctacctctcctgttgtaataacatcactgacaggtccttg
ttactgctggcgcagcactgtaaccgcctgaaaacactcgacatctcaaggtgcaaaaac
atctccgtgacagctgtggacctgcttcagtcacagctgcccttcttggaaaatgtccac
ttcaaatgcataggtgggtttgatctgacccttacactgaatgactga
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