Perca flavescens (yellow perch): 114560326
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Entry
114560326 CDS
T07494
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03022
Basal transcription factors
pflv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114560326 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
114560326 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pflv03021
]
114560326 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
pflv03400
]
114560326 (gtf2h1)
Transcription machinery [BR:
pflv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
114560326 (gtf2h1)
DNA repair and recombination proteins [BR:
pflv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
114560326 (gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
114560326
NCBI-ProteinID:
XP_028441422
LinkDB
All DBs
Position
8:21385745..21395277
Genome browser
AA seq
550 aa
AA seq
DB search
MSSLSEEVLLVVKKVRQRKQDGTLYLMAERIAWGPEGKDRFTVSHLYADIRCQKISPDGK
AKIQLQLVLHTGESTTFHFSNESSALKDRDAAKELLQQLLPKFKKKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISADEFWANRLGDINNADPTLSNNKQEVGISGAFLADIRPQTDG
CNGLRYNLTADIIESIFRTYPAVKEKYSENVPHNLTEKEFWTRFFQSHYFHRDRINTGTQ
DIFSECAKQDEKGLKSMVVQGVKNPLVDLLSLEDKTLDEGYGFCKTFPSTSNSNRTVKES
SNSAIIKRFNHHSAMVLAAGSRKGETPADHICETSSTDGNSRDSDFFQPPVKKVKLQEVI
EYEDLQRENRPKTIALNLKKSDRYAHGPVPLQSQHYTTSQDIINSVNYIRHEMLNYKPNL
TQVLSSTTASSAIAALSPGGVLMKAATQQAINQMVPTEVQGELKHLYVAAGELLRHFWSC
FPVNTPFLEEKVMKMKSNLERFQMTKLCPFQEKIQRQYLSTNLTGHLEEMLQTAYRKFHV
WQTRRMLRKT
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcactatcagaggaggtgctgctggtggtgaaaaaggttcgccagaggaagcag
gatggcacactttatctgatggctgaacgtatagcctggggtccagagggcaaagaccgc
ttcacagtcagccacttatatgcagatattcgctgtcagaagatcagcccagatggtaaa
gccaaaattcagctccagctggtgcttcacactggcgagagtaccacattccacttttcc
aatgagagcagtgcactcaaagacagagatgctgccaaggagctgctgcagcagctgctg
cccaagttcaagaagaaagccaacaaggaactggaggagaaaaacaggatgcttcaagaa
gatccagtgctttttcagttgtataaggatcttgtggtgagccaggtgatcagtgcagat
gaattctgggccaaccggttaggagacataaacaacgcagaccccactttatccaacaat
aaacaggaagtcggtatatctggagcctttctggcagacattagacctcagacagatggc
tgcaatggcttgagatataatctgacagctgatattattgaatccatcttcagaacatac
cctgcagtgaaggagaagtatagtgaaaatgtgcctcataatctgacggagaaggagttc
tggacccgctttttccagtcccattattttcacagagaccgcatcaacacaggaacacag
gatatcttctcagagtgtgccaagcaggatgaaaaggggttaaaatctatggtggttcaa
ggagtgaagaatcctttagtcgacctcctgtcgttagaggataaaacattagacgagggt
tatggattttgcaaaacatttccatcaacttccaattcgaacaggacagtgaaagagagc
agcaactctgccattataaagcggttcaaccatcacagtgccatggtgctggcagcaggc
tcacgcaagggggaaacaccagctgaccacatttgtgagacaagcagtacagatggaaac
tcaagggattctgacttcttccagcctcctgtaaagaaggttaaattacaagaagtcata
gaatatgaagatctgcaaagggaaaacagaccaaaaacaattgcattaaacctcaagaag
tctgacaggtatgctcatggtcctgtgccacttcagtcccaacactatacaacaagtcag
gatatcatcaactctgtcaactacatccggcatgagatgcttaattacaaacccaacctc
actcaggtgttgtccagcacgacagccagttctgccattgcagcactttctccaggtggt
gtcctcatgaaggcagcaacacagcaagccataaatcaaatggtacctactgaggttcaa
ggagagttgaagcatctttatgtagctgctggagagttgttgagacacttctggtcctgt
tttcctgtaaacacgccatttttagaggagaaggtgatgaaaatgaagtcaaacctcgag
agatttcagatgaccaagctttgtccttttcaggagaagattcagcgtcagtacttaagt
acaaacctcactgggcatttggaggaaatgttgcagacagcctatcgcaagttccacgtc
tggcaaacccgccgcatgttgaggaaaacctga
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