KEGG   Perca flavescens (yellow perch): 114560443
Entry
114560443         CDS       T07494                                 
Symbol
usb1
Name
(RefSeq) U6 snRNA phosphodiesterase isoform X1
  KO
K23093  U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
pflv  Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:pflv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pflv03041]
    114560443 (usb1)
Spliceosome [BR:pflv03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    114560443 (usb1)
SSDB
Motif
Pfam: HVSL
Other DBs
NCBI-GeneID: 114560443
NCBI-ProteinID: XP_028441619
LinkDB
Position
8:complement(8416896..8421127)
AA seq 302 aa
MKVELIRGGAVFHWDLNEHYNRMLVGYSSSSEEESESSAAAATDRNKSSSRKCQEEDDAN
NGSPARKKHKIEEQVPKTRLPLPGCLLAMFPDEVGSQTEDSSLHGGRVRSFKHERGNWAT
YVYLPYHPEEEFRELLEELLSLAGDHGVALTPQEEFHLSLSKTVVLRHHWIQTFTQSLRA
GLMHCKRFVCSAGTLRVYCNAERTRTFLGMEVCTGHAQLLDLSQVLDRTMTEFHLDTFYK
DPSFHVSLAWCVGDLTGQMKECIQEMQRLIDDHEEGPFLLRLDCVELRCRTGNKTFRFPL
EP
NT seq 909 nt   +upstreamnt  +downstreamnt
atgaaagtggaactgattcgaggtggtgctgtgtttcactgggacctaaatgagcattac
aacaggatgttggttggctacagcagcagctcggaggaggaaagcgagtcgtcggcggca
gcagcgactgatcgaaacaaaagttcttctcgaaagtgtcaagaggaagatgatgctaac
aatggcagcccagcgagaaagaaacacaaaattgaggaacaggttcctaaaacgaggcta
cctcttcctggttgcctgttggccatgtttccagatgaagtgggttcacagactgaagac
agctctctccatggtggacgcgtgcgctcttttaaacacgagagaggcaactgggctacc
tatgtttatttgccataccatcctgaggaggagttcagggagttgttggaggagctgctc
tcactagccggggaccatggtgtggctttgaccccgcaggaggagttccacctcagcttg
tctaagacggtggtgctcagacaccactggatccaaaccttcacccagagcctcagggca
ggcctgatgcactgcaagaggtttgtgtgctcagcagggacactgagggtctattgtaac
gctgagaggacgaggacgtttctggggatggaagtgtgtactgggcatgctcaattgttg
gacctgagccaagtactggacagaacaatgacagagtttcacctggacactttctataag
gatccatctttccacgtaagtctggcctggtgtgttggagacttgacaggacagatgaag
gagtgcattcaggagatgcagagactgattgatgaccacgaagaaggaccatttctgctg
aggctggactgcgtggagctgcgctgcaggacgggaaacaagaccttccgcttccctctg
gagccctaa

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