Perca flavescens (yellow perch): 114560461
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Entry
114560461 CDS
T07494
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pflv03036
]
114560461 (chd9)
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
114560461 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
HTH_Hrp3
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
114560461
NCBI-ProteinID:
XP_028441652
LinkDB
All DBs
Position
1:34447762..34529609
Genome browser
AA seq
2993 aa
AA seq
DB search
MDFFNDPNLFVGGLEGLDEDGFPSAPSLVDELNLTADFEPLQVEPLDPGKHQDMIPPVTT
QQAIPAYSQQIGHYIGIKAHNPMGQTFSGPGGTGGGGGNLIADQHGQYHNAAMSQVPQSN
GLFCNSSSPMWGNQDQNGNMYHPLSQQQQQLCQQQLHNQQLHVRQQQTQQQQHHPCHQQQ
EQQHRMQQQQQLQQQQSHHQQQLINQHQQINTQTMSLQQQQRHNFSFQQGGQSQRQQQVH
HTQQQVQHQLTVEGPRFHSRAMPSKSYLGSQSASLSGTCLQPQQQQGSYQLTRGRLEDPN
LPFPMHSSSMVHSLSTCSVSSATAYQAAQYPAYPGEPEIPSLSHQSLSMPTTTTAPLTST
VPELSGTVCQFPSTAVMRTPVSQAEECPFRALRCSGETQGNCKSSEMFGASMNCYPSMSS
QLPSEQPQSCRAINTNGYQALGDTLLPSEAQDGDLEGLEPPDLLPDLLPQLEAALSQHDE
SNCSWVDSSRETGHEHRKPPPVDYKEEKPRKNANGPGSQVRVLSPPIKSSSSSSSSSSSS
SPSSSSSSEKRTPRRTHHQMESPTQDKQEKANRIISEAIAKARQRGEKNIPRVMSPESFP
SSSSQYKHRKREHKGNGKARPKEKNCRKACIVPSSKPKQKAKIGKIVIKFGKKKKRKPES
SEESDDDPPTRHTSKDDDSKRRSGRQVKRKKYAEELEARLSDDEVKVIVKAKKTNTAASK
QPAVQLFVENPSEEDAAVVDKIMSSRIVKKEVVSPGVVVEGEEFFVKYKNYSYLHCEWAT
EQQLVKDKRIQQKIKRFKMKQAQRALFFADMEEDPFNPDYVEVDRVLEVSYCEDKDTGEE
VVYYLVKWCSLPYEDSTWELKDDVDQSKIEEFEQLQAVKPDSRRMERPPANLWKKREHSR
EYRNGNSLRDYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQSITFLEEIYRVGIKGPFL
IIAPLSTIANWEREFRTWTHLNVIVYHGSMVSRQMLQQYEMYFRDAQGRVMRGTYRFQAV
ITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGFKLMNLEHKVLLTGTPLQNT
VEELFSLLHFLEPARFPSEITFMQEFGDLKTEEQVQKLQGILKPMMLRRLKEDVEKKLAP
KEETIIEVELTNIQKKYYRAILEKNFSFLAKGAGQANMPNLVNTMMELRKCCNHPYLIKG
AEEKILEDFREVYSPTAIDFHLQAMVQSAGKLVLIDKLLPKMKAGGHRVLIFSQMVRCLD
ILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSERFVFLLCTRAGGLGINLTAADT
CIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQ
SMSGRDNSLGGGAGGAAVQQQQLSKKEIEDLLRRGAYGAIMDEEDEGAKFCEEDIDQILQ
RRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWDKWAKKADIDMEMANGRNSLV
IDTPRVRKQTKPFSATKDELAELSEGNSDSDDTKPKLRRNHDRLNSYGRTECFRVEKNLL
VYGWGRWKDILNHGRFKKQLTERDVESICRALLSYCLVHYRGDDKIKSFMWDLIAPTEDG
RTKELQNHLGLSAPVPRGRKGKKMKIQSSSFDIHKAEWLRKHNPEHMLQDDGYKKHLKHH
CNKVLLRVRMLYYLKQEVIGSQAQRVLDGVDFSEIKIWVPDPDHSELPALWWDTISDKCL
LLGVYKHGYEKYNTVRADPTLCFLERVGRPDEKAIAAEQRGNDFMDGDVDDPEYKPAPAL
LKDDMEDDASSPGDLVVTDNAGDAVPVTEGETSYWPSPSVLTARLRRLITASQRYTKSRQ
ILQIHQTQTPSPSSMILSAPLCPLPPTLNDTLNPKMVAKIERQQRWTRREEADFYRVVST
FGVVFDPNLGRFDWTKFRAMARLHKKTDESLQKYLCAFTAMCRRVCRLPPKEGDSAVDPS
LTIQPITEERASRTLYRVELLRQVREQVIRHQLLYERLPLCQMSSDLPVWWEAGTHDHDL
LIGAAKHGVSRTDYHILRDPELSFMAAQRNYSQTKAAQQQSHTSTLLLHPQCQASSSVLT
GSPLPPPAPRDAEPSGVVPKVELASEGEDGREKQGESWSPPQAPATPTGLEEKPVSEMRD
KERQMVAARTKPLTPNSSERKPKKASKRSRREARRGSESDSDGSSSSSSSRSSSSSSSSS
SSSSHSGSSSSSSSSSCSSGSSSSSSSSSSSSEDSESEGGEGKKKVPAATTVKGFDEDSV
ASLSTTLDETQDTHATENGITNNSSHPFQGGGYMLAASYWPKDRVIINRLDSICQAVLKG
KWSGTRRVYEPGGAVASFYTTKLLDNANSLCEDPSSSPQGSKVTKHVAENKEFSVKLNDH
EGGLKLTFQKQGLPLKRPLDSEEGPQAQQQYLARLHELQSASDTGLADITKPQCSFQTVP
PGLTGQMRLNGVLDGQPVVKRRRGRRKNVEGMDLLFMNRGKVPAVPDQVPPGWGGIGQVG
MAVAPVPGFSQSSSQVPSDTDTRVPVINLKDGTRLAGDDAPRRKDLEQWLMEHPGFVADT
GAFIPGVNKMQMQFHFQDGRPKQKRHRCRNPNKIDVNSLTGEERVQIINRRNARKVGGAF
APPLKDLCRFLQENPEYGVPPEWADVVKQSGYLPESMFDRILTGPIVPEEVSRRGRRPKN
PLAKAAAAAAAAAPNPAASALGLNPLLANGLLSGMDLSSLQAFQQNLQSLQSLQLTAGLM
GLPSDASNLAASNLAAMFPMMLSGMAGLPNLLGMSSLLGKPAQEGTAGSEEKTKGTSSAV
TGELSASKAPSHTSDTKGERTEGSNSTPSSTSSSASSATAPQSASAASAASGHPLSLNPL
LLSSMLYPGMLLTPGLNLPVSATQPQSSNSDPTLPPARPPPPAVSQSSPQEIARRAAERD
GGEDDEALEDEEEEEDDSAEQKENSGPEGLGKAESSSSESGSSSSSDDSDSSD
NT seq
8982 nt
NT seq
+upstream
nt +downstream
nt
atggacttctttaatgaccccaacctctttgttggaggtttggaagggctggacgaggat
ggcttcccctcagcaccatcactcgtggatgagcttaacctcactgctgactttgagccc
ctccaagtggagcctctagacccagggaagcaccaagacatgatcccaccagttactacc
caacaagccatacctgcttacagtcagcagataggtcactacattggcattaaggcacat
aatcctatggggcagacattttctggtcctgggggcacaggtggtggaggtggtaacttg
attgcagaccaacatggccagtaccataatgctgccatgagccaagtacctcaatccaat
gggctgttctgtaacagtagcagtccaatgtggggcaaccaagaccagaatgggaatatg
taccatccattatctcaacagcaacaacagctttgtcagcagcaactgcacaaccagcaa
cttcatgtccgacaacaacaaacacagcagcaacagcaccacccgtgtcatcaacaacag
gagcagcagcacagaatgcagcagcagcagcagctgcaacaacagcaaagtcatcatcag
caacagctgataaaccagcaccaacaaattaatacacagactatgtccctgcagcaacag
caacgtcacaatttctcctttcaacagggaggtcaatctcagcgccaacagcaagttcac
catactcaacagcaggttcagcaccaactaactgtagaaggaccaaggttccattcaagg
gcaatgccaagtaagtcttatttgggtagtcaaagtgcttctctgagtgggacttgcctg
caaccacagcagcagcagggtagctaccagttgacgaggggacgactggaagaccctaac
ctgcccttccccatgcattcttcatctatggttcactccctgtccacatgctcagtcagt
tctgccactgcttaccaagctgctcagtaccctgcctaccccggagagccagaaataccc
agtctcagtcatcagtcgttgtctatgcccaccaccaccacggcacccctcacttctaca
gtgcctgagctctcagggacagtatgtcagtttccatccacagcagttatgaggacccca
gttagccaggcggaggaatgtcctttccgggcccttcgttgctctggagaaactcaggga
aactgcaagtcttctgagatgtttggcgcgtctatgaactgctaccccagcatgtccagc
cagctgccctctgagcagcctcagagctgcagggccatcaacactaatggataccaagca
ttgggagacactctcctgccatcagaggctcaggatggagacttggagggcctggagcct
cctgacctcctgccggacctcctgccccagctggaggctgcactcagccaacatgatgaa
tccaactgttcctgggtcgattccagccgggagacgggacatgagcacaggaaacctcca
cctgttgactacaaggaagaaaagcctcgaaagaacgctaatggtcctggtagccaggta
cgggtcctcagtcccccaataaagagcagctcatcgtcctcctcctcgtcctcatcgtcg
tcaccctcatccagttcgtcatcggagaagaggacgccacgcaggacgcatcatcaaatg
gagtcacctacacaggacaagcaggagaaggccaataggataatatcagaggcaattgct
aaggcccggcagcgtggggagaagaacatcccaagagttatgagccctgagagcttcccc
agctcttcctcgcagtacaagcaccgtaaacgcgagcacaaaggaaacggcaaggcacgg
cctaaagagaagaactgtaggaaggcctgtattgtaccctcctccaagcccaagcagaag
gccaagattgggaaaattgttatcaagtttgggaagaagaaaaagcgaaagcctgagtct
tcagaggagtcggatgatgaccctcccacacgacacacttctaaagatgacgactctaag
aggcgatcaggtcggcaggtgaaaagaaagaaatacgctgaagagctggaggccaggttg
tcagatgatgaggtcaaagttattgtcaaagccaagaaaaccaatactgcagcatccaag
cagcctgctgttcaactctttgtagagaatcccagtgaagaggacgctgctgttgttgac
aaaatcatgtcttctcgtatcgtcaagaaggaggtagtctctccaggagtggtggtcgaa
ggggaggagttttttgtaaaatacaaaaactactcctacctacactgtgagtgggccaca
gagcagcagctggtgaaggacaagaggattcagcagaagatcaaacgtttcaagatgaaa
caagcacagagggcactcttctttgcagatatggaagaggacccctttaaccctgactat
gtagaggtagacagagtgctggaggtatcgtattgtgaggataaagacacaggagaggag
gtggtgtactacctggtgaagtggtgctctctgccttatgaggacagcacctgggagctg
aaggacgacgtagatcagagcaagattgaagagtttgagcagctgcaggcagtgaagcca
gactcgcggaggatggagcggcctccagcaaatctgtggaagaagagggaacattcgaga
gaatacaggaatggcaacagcctcagggactaccaactagagggggtcaactggctcctc
ttcaactggtacaacagacgaaactgcatcctggcagacgagatgggcctgggaaagacc
atccagtccatcacattcctagaggagatctatcgtgtgggcattaaagggccattcctc
atcattgcgccgctctccaccattgctaactgggagcgcgagttccgtacttggacccat
ctcaatgtcattgtctaccatggaagcatggtcagcaggcagatgctccaacagtatgag
atgtatttcagggatgcacagggccgtgtgatgcgaggtacctacaggttccaagccgtt
atcacaacgtttgagatgatcctgggaggctgtcccgaactcaacgccatagagtggcgc
tgtgttatcatcgatgaggcccaccgcctcaagaacaagaactgcaaactgctagagggc
tttaagctcatgaatctggagcacaaggtcctgctgacaggtactcctcttcagaacaca
gtggaggagctcttcagcctgctccacttcctggagccggcacgcttcccctcagaaatc
accttcatgcaggagtttggagacctcaagactgaggagcaggtacagaagcttcagggg
atcctgaagcccatgatgctgcgtcggttaaaggaggacgtggagaagaagttggctcct
aaagaggaaaccatcatcgaggttgagctcacaaacattcaaaagaaatactaccgtgcc
atcctagagaagaacttctctttcctggctaaaggagctggccaggcaaatatgcccaac
ctggtcaacaccatgatggagctaagaaagtgctgcaaccacccctacctcatcaaaggg
gcagaagagaagatcctagaggacttcagggaggtgtatagccccactgccatcgatttt
cacctgcaggctatggtacagtctgccgggaagctggtccttattgacaaactgctgccc
aagatgaaggccggggggcacagggtgcttatcttctcccaaatggtgcgctgcctggac
atcttggaagactacctcattcagagaaggtacttgtatgagcgaatagatggacgtgtt
cgtgggaacctgcggcaggcagctatcgaccgcttcagtaagcctgactcggaacgcttc
gttttccttctgtgcacaagagctggtggcctgggaatcaacctcacagcagcagacaca
tgcatcatctttgactcggactggaacccgcagaacgacctgcaggcccaggctcgctgc
catcggatcggtcagaacaaggcagtgaaggtgtaccgactgatcaccaggaactcatac
gagcgagagatgtttgatcgcgccagcctcaagctgggcctggacaaagcagtgctgcag
agcatgagtggccgagataacagcctgggaggaggagccgggggagcggcagtgcagcaa
cagcagctgtctaagaaggagattgaagatctgttgcgacgtggtgcatacggggccatc
atggatgaggaggatgaaggggccaaattctgtgaggaggatatcgatcagatcctccag
cgcaggacaaagaccatcaccattgagtctgagggacgaggatccacctttgctaaggcc
agttttgtggcgtccggaaaccgcacagacatctctctggatgaccccaacttttgggat
aaatgggccaaaaaagctgacattgatatggagatggccaacggcagaaacagcttggtg
atcgacactcctcgcgtcagaaagcagacaaagccgttcagtgccaccaaggatgagttg
gcagagctttcagagggcaacagcgacagtgacgacaccaaacctaagctcaggcgaaac
cacgaccgcctcaacagctatggacgcacagagtgcttcagagtagagaagaacctgctt
gtttatgggtggggtcgttggaaggatattctcaaccatgggcgttttaagaagcaactg
acagagagggatgtggagtccatctgcagggccctgctgtcttactgcctggtccattac
cgtggagatgacaaaattaaaagcttcatgtgggacctgatcgcccctactgaagacgga
cgcaccaaggagctgcagaatcacctgggtctgtctgctccagtccctcggggcagaaag
ggtaagaaaatgaagatccagtccagctcttttgacatccacaaagctgagtggcttagg
aagcacaacccagagcacatgcttcaggacgatggctacaagaaacacctcaaacaccac
tgcaacaaggtgctgctcagggtcagaatgctctactacctgaaacaagaggtcatagga
agccaggcccagagggtgttagacggcgtggacttcagtgagataaagatctgggtgcca
gaccctgatcattcggagctgccagccttgtggtgggataccatttctgacaagtgtctg
ctgctgggtgtctataagcatggttatgagaagtacaacactgttcgtgcagatcctacc
ctgtgcttcctagagcgtgtgggacgaccagatgagaaggccattgctgctgaacagaga
ggcaacgattttatggatggggatgtggatgacccagagtacaagcctgctccagccctg
ctgaaggacgatatggaggatgacgcctcttctcctggagacttggttgtcactgacaac
gctggagatgcagtcccagtgacagaaggcgaaacgtcctactggccctcaccctcggtg
ctgacagccagactaaggcgactaatcacagcctctcaacgctacaccaagagccggcag
atcctccagatccaccagacccagactccctctccgtcgtccatgatactgtcggctcca
ctctgcccgctgccccctacactcaacgacacgctcaaccccaagatggttgctaagatt
gaacggcaacaaaggtggaccaggcgagaagaggctgacttctaccgtgtggtctctact
ttcggtgttgttttcgacccaaaccttggccggtttgactggaccaagttcagggccatg
gctcggctgcacaagaagactgacgagagcctgcagaaatacctgtgtgcttttaccgcc
atgtgccggagggtgtgtcgcctgccacccaaagagggagactctgcagtggacccgtct
ctgaccatccagcccatcacagaggagcgagcatctcgtacactgtacagagtagagttg
cttcgccaggtgagggaacaagtaatccgccatcagttactctatgagcgcctgccgctg
tgccagatgagctctgacttgcccgtctggtgggaggctggtacccatgaccatgacctg
ctaattggagctgccaagcatggcgtcagccgcacagattaccacattctgagagaccct
gagctcagcttcatggctgcccaacgcaactacagccaaacaaaagctgcacagcagcaa
tcgcacacatccaccctgcttctacaccctcagtgccaggcctctagctcggtgttgaca
ggctctccactgcctccacccgcgccgagagatgcagagcccagtggggttgtacctaaa
gtggaactagcctcagagggggaggacggccgggagaagcagggggagagttggagccct
cctcaagcaccagctactcccacaggcctggaggagaagccggtgtctgagatgagggat
aaagagaggcagatggtggcggcgcgaaccaaacccctgacacccaactcctctgagagg
aaacctaagaaggccagcaagaggagccgcagggaggctaggcgtggctctgagtctgac
tcagatggctcttcctcaagctcttcatcacgctcctcttcctcctcctcctcatcctct
tcttcctcgtcacattccgggtccagctcatcctcctcatcatcatcttgctcctctggc
tcttcgtcatcctcgtcctcctcctcatcctcttccgaggacagtgaaagtgagggaggg
gaagggaagaagaaagtgccagcagcaacaactgtaaagggctttgatgaggacagtgtg
gcgtctctgagcactacactggatgaaacccaagacacccatgcgaccgagaacggcatc
actaacaactcctcgcatcctttccagggaggaggatacatgctcgctgcatcctactgg
ccaaaggatcgtgtgatcatcaaccgcctggacagcatctgccaggcagtgctgaagggc
aagtggtcaggaacacgtcgggtctacgagcctggaggtgcagtggcctccttctacacc
accaagctgctggacaacgccaacagcctgtgcgaggacccctcttcctcaccacagggg
tcaaaggtgaccaagcatgttgcagaaaacaaggagttctcagtaaaactcaacgatcat
gagggaggtctgaagttgaccttccagaaacaaggtctacctctgaagaggcccctggat
tcggaagagggcccccaggcccagcagcagtacctggcacggcttcatgagctgcagagt
gcctcggacacaggcctggcagacatcaccaagcctcagtgcagcttccagactgtgcct
ccaggtcttactggtcagatgaggctcaacggagtactggatggccaaccagtggttaag
aggcggagggggaggaggaagaacgtggaggggatggacctgctcttcatgaacaggggt
aaagtccctgctgttcctgatcaggtgcctccagggtggggtggtattggccaggtgggc
atggctgtggcccctgtgccgggcttcagccagagctccagtcaggtcccatcggacact
gacaccagggtccctgtcatcaacctcaaagatggcacccggctcgctggggacgacgct
cccaggaggaaagatctagaacagtggctaatggagcaccctggctttgtggcagacaca
ggagcctttatccctggggtaaataagatgcaaatgcagttccacttccaggacggtagg
ccgaagcagaagaggcaccgctgcaggaaccccaacaagattgatgtgaacagcctgacg
ggagaggaaagggtccagatcatcaacaggagaaatgcacgcaaggttggtggagccttc
gctcctcctctgaaggatctgtgccggtttcttcaggagaaccctgagtatggagtccca
cctgaatgggctgatgttgtcaaacagtcgggttacctcccagagagcatgtttgacagg
atcctgacgggacccatcgttcctgaggaggtgagccggcgtggacgccgacctaagaat
cctctggctaaggcggcggcggcggcggccgctgctgcacccaacccagcagcctccgcc
ctgggtctgaaccccctactggccaacggcctcctctctggaatggacctgagcagcctg
caggccttccagcaaaacctccagagcttacagtccctgcagctcaccgcaggcctgatg
gggctgccgtccgacgctagcaacctggctgcaagtaacttagctgccatgtttcccatg
atgctgtctggtatggctggattgccaaacctgcttggcatgagcagcttgctcgggaag
cctgctcaggaaggcacagcaggctctgaggagaagacaaagggaaccagcagcgctgtg
acaggagagctgtctgcctctaaagccccctctcacacctcagacaccaaaggagaaagg
acagagggctcaaactcgactccttcctccacttccagctccgcttcctctgctaccgcc
ccacaaagtgcttcagctgcctctgcagcctccggtcacccactgtctcttaaccccttg
ttactctccagtatgctttacccagggatgcttctcactccaggccttaaccttcctgtg
tctgccacacagccgcagagctcaaacagtgaccccaccctacctcctgctcgtcctcct
ccacctgcagtctcccagtcatcgccacaggagatagctcggcgagcggcagaaagggac
ggaggcgaggatgacgaggcattagaagacgaagaagaagaagaagacgactctgcagaa
caaaaggaaaacagtggtcctgagggtttggggaaagctgagtcatcttcatcagagtct
gggagctcttcttcatcagatgattcagactccagtgattag
DBGET
integrated database retrieval system
