Perca flavescens (yellow perch): 114560516
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Entry
114560516 CDS
T07494
Name
(RefSeq) contactin-1a-like
KO
K06759
contactin 1
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
114560516
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pflv04515
]
114560516
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pflv00537
]
114560516
Cell adhesion molecules [BR:
pflv04515
]
Immunoglobulin superfamily
Contactins
114560516
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pflv00537
]
Others
114560516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
C2-set_2
Ig_4
Pur_ac_phosph_N
DP-EP
K319L-like_PKD
Motif
Other DBs
NCBI-GeneID:
114560516
NCBI-ProteinID:
XP_028441749
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All DBs
Position
8:complement(18689314..18752502)
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AA seq
1019 aa
AA seq
DB search
MLHLTLLLHVLVLSLSPADASMHGEVPDFYEDEATGYGPVFEEQPVDIIYPEESPEAKIT
MSCRARANPPATYKWIMEDMEIDLNAQGSHYSLVGGNLVISNPIKTKHVGQYFCLATNKY
GTVISREASVQFGYLDLFSSEERESVHVKEGQGAVLLCASPPHYPAELSFRWILNEFPTF
IPLDKRRFVSQITGNLYISKVDSSDSGNYSCIASSQSISKSVFSNYIPLVPIAERPIRKY
PADLKVKFPDTTALVGQNITLECFALGNPVPEIRWKKLDGQLPPNHEVRMAGAHLHLYNV
QFEDGGSYQCEAVNSKGKDYHAARVSVEAFPEWVEHISSTEKDLSSDYTMSCIASGKPEP
RIRWLKNGEPSDRKEMRFSSLTFDDSGMYQCIAENHHGVIYANAELRVYACAPTFEHNPV
KRVLAPKNGRVVIQCRPKAAPKPTFSWSKDTELLYNSTRVFIWEDGSLEILNVTSADEGR
YTCFAENDRGKANSTGSLLVTESTKITMAPSNADVKVGENTRMQCAASHDPSLDITFIWS
LDGRVIDLHKDSQHYERILNGSSNGELLIKSLQLKHAGRYTCTAQTPIDNVTASAHLVVR
GPPGAPGGVRVMNKTDKNVTLQWSRGADNHNPISKYTIQYRDSFSKEVWKNATTSPTDVE
GNTEMATVVDLFPWIEYEFRVIATSALGTGEPSSPSPKDKTLEAIPVVAPSDVGGGGGSS
RELTITWTPVQPQYYYGPNFGYIVAFKPQDGHEWSKVTVADPQAKRYVHKDPSIPPSTEF
QVKVKAFNSKGEGPFSLTAIIYSAQDAPSEAPVSVDGRALSATEAIVWWLPLSQSNIDGY
QVKYWRNQEDSEGRAQRVVVPGSENHTRLEGMKPDSHYLIEVRGYNSAGYGPASEHLQIH
TKKAPPSRPPRIAGKKLKGRKVNIVWEHVEPLANEAPVDGYKVLCRQQGHSTGTLYTTSK
QSIDLLLPTDGNYVVEVRAHTEGGDGAVAQVNITGGSVISAPSLSVLSLLLVALLCLNL
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacctcaccctgctcctccatgtcctggtcctctctctctcccctgcagatgca
tcaatgcatggcgaagtacctgacttttatgaagacgaagccacaggttacgggccggtg
tttgaggagcagccggtggatatcatctaccccgaggagtcacccgaggcaaaaattacc
atgagctgccgggctcgggccaatccacctgccacatacaagtggattatggaggacatg
gaaattgacttgaatgcacaaggaagccactacagtttagtaggaggcaacttggtcatc
agcaaccccattaaaaccaaacatgtaggacagtacttctgtttggctaccaacaagtac
ggcacggtcatcagccgagaggcctcagtccagtttggatatctcgatcttttctcatct
gaggagagggagtcggtgcacgtcaaagagggacagggggcagtgctgctctgcgcttct
ccacctcactatccagccgagctgtcattccgatggatcctcaatgaattccctaccttc
atcccactggacaagaggcgttttgtctcccagataacgggtaacctctacatctccaag
gtggactcctccgacagcggcaactactcttgcattgcgtccagccaatccatttccaag
agcgttttctccaactacatccccctcgtacctattgctgaacgtcccatccggaaatac
cctgctgacctcaaagtcaagttcccagacaccactgctctggtggggcagaatatcacc
ttggaatgcttcgctttgggaaaccccgtccctgagatccgctggaagaagttagacgga
cagctgccacccaatcacgaggtgcggatggcgggggctcatctgcacctgtacaatgtg
cagtttgaagacggaggcagctatcaatgtgaggcagtgaactcgaaaggaaaggactac
catgctgcacgtgtgtctgtagaagctttccctgagtgggtagagcacatcagcagcaca
gagaaagacctcagtagtgattacactatgtcctgcatagccagtggcaaaccagaacca
cgcatccgctggctgaaaaatggagaaccgtctgataggaaagagatgaggttcagcagc
ttgacgtttgacgattcagggatgtaccagtgcattgcagagaatcaccacggagtcata
tatgccaatgcagaactgcgtgtttatgcctgtgctcccacatttgaacacaacccagtg
aagagagtcctggcacctaaaaacggccgggtggtgatccaatgtcgacccaaagcggct
ccaaagcccaccttctcttggagcaaagacaccgagctactttacaactccaccagggtg
tttatctgggaggatgggagcctggagatcctcaacgtgaccagcgctgatgaaggcagg
tacacctgcttcgccgagaatgaccggggcaaggccaacagcacgggctctctgttggtt
acagagtccacaaagatcaccatggcaccgtccaatgctgacgttaaagtgggtgagaac
accaggatgcagtgtgctgcgtcccatgacccctcactggacatcaccttcatttggtcc
ctggatggccgggtcattgacctgcacaaggacagtcaacattatgaacgcattctgaat
ggaagttcaaacggcgagctactgattaagagcctccagttgaagcatgccggacgctac
acctgcactgcacagacccccattgacaatgtcaccgcctctgcccaccttgttgtcagg
ggtccccccggtgccccaggtggggtgcgagtgatgaacaaaactgacaagaatgtaaca
ttgcagtggagccgtggagcagacaaccacaaccccatctccaaatataccatccagtac
agggactccttctcaaaagaagtctggaagaatgccactacatctcctacagatgtagag
gggaatacagagatggccacagtggtggatttgttcccctggatagaatatgagttcaga
gtgattgccactagcgctctggggacaggagagccgagcagcccgtcacctaaagacaaa
accctggaagcaattcctgtggtggcgccctcagacgtcggcggcggtggagggagtagc
agagaactgaccatcacgtggacgcctgtacagccacagtactactatgggcctaatttt
ggctacattgtggccttcaaaccacaagatggacacgagtggagtaaggtgacggttgct
gacccgcaagccaagcgctatgtccacaaagacccctccatccctccatcgacagagttt
caagtcaaagtcaaagccttcaacagcaaaggagagggacccttcagcctaacagctatc
atttattctgcacaggacgctccatctgaagctcctgtaagtgttgacggcagagctctc
tctgccacagaagccatagtgtggtggctgcctctctcacagagcaatatcgatggatac
caggtgaagtactggaggaatcaggaagacagtgaggggcgggcccagagggtggtggta
cctggcagtgagaaccacaccaggctggagggtatgaagcctgactcccactaccttatt
gaggttcggggctacaactctgcaggatatgggccggccagcgagcacctccagatccac
accaagaaagcccctccaagtcgacctcccagaatagctggtaaaaaattaaagggccgg
aaagtaaatattgtctgggaacatgtggaaccacttgctaacgaggcaccggtggatggt
tacaaagtgctgtgcaggcagcagggccactccacaggcactctgtacacaaccagtaag
cagagcatagaccttctcctgcccacagacgggaactacgtggtggaggtccgggcgcac
acagaggggggagatggggccgtggcacaagtcaacatcacaggtggaagtgtcatatcc
gccccgtctctcagcgtactctccctgctcctggtggctctcctctgcctgaacctctga
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