Perca flavescens (yellow perch): 114560670
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Entry
114560670 CDS
T07494
Symbol
rag1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
114560670 (rag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflv04121
]
114560670 (rag1)
Enzymes [BR:
pflv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114560670 (rag1)
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114560670 (rag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_4
zf-RING_10
zf-C3HC4_3
zf-RING_2
U-box
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
114560670
NCBI-ProteinID:
XP_028442007
LinkDB
All DBs
Position
8:complement(16123380..16127539)
Genome browser
AA seq
1071 aa
AA seq
DB search
MAEESQETDGPRSSMPAELHHPHSEYSQWKFKLFRVKSMEKAPLPSETQPEKGALLEISH
HAAPNIELDNAVSPGSVMKLCLGGKSKENVEGPGWRVDMKLQEMDTHMNQLRCLCRLCGM
TLRKVKGPVHDVNGDLDEISRAALRKMGCKFTSWPEVILKVFKVDVTEDIESVQPLLFCH
RCWVVAIRGGGVCSFSRTKVPEWKPHSSPCHLCSPRKPSFQRTGRKRRKAIPKAQSLAKR
TRWDYSDSIAVGERRALRPFGDHHHAPVLRACRKTSIQREQWVRNITHCQKDHVNTKLIS
EKLPVDFLFSFTCLVCDHLLSDPVQSPCGHLFCRSCILKYNHVLGPHCPACNLSCAPDDL
SPPTKTFLSALHSLPLLCPRSGCGKQVRLDSFKAHCLGHELDGRDPKQQSSEIDNSLQAN
KGGRPRQHLLSLTRRAQKHRLREMKNQVRAFADKEEGGDLKSVCQALFLLALRSANEHRQ
ADELEAMMQGRGFGLHPAVCLAIRVNTFLSCSQYHKMYRTVKATSGRQIFQPLHSLRAAE
KELLPGFHEFEWQPALKNVSTSCSVGIINGVSGWASSVDDFPADTITRRFRYDVALVSAL
KDLEEDIMEGLSESGMEDSACTSGFSVMIKESCDGMGDVSEKHGGGPAVPEKAVRFSFTI
MSISVLADEEEKEVTIFTEPKPNSELSCKPLCLMFVDESDHETLTAVLGPIVAERNAMKE
SRLIVSMGGLPRSFRFHFRGTGYDEKMVREMEGLEASGSTYVCTLCDSTRAEASQNMVLH
SVTRSHEENLDRYEIWRTNPFSESVDELRDRVKGVSAKPFMETHLTLDALHCDIGNATEF
YKIFQDEIGEVYKKVNPSREERRSWRAALDKQLRKKLKLRPVMRMNGNYARRLMTQEAVE
VVCELVPSEERREALRELIRIYLQMKPVWRASCPAKECPDQLCRYSFNSQRFADILSSTF
KYRYDGKITNYLHKTLAHVPEIIERDGSIGAWASEGNESANKLFRRFRKMNARQSKAFEL
EDVLKHHWLYTSKLLQKFMQAHKDSAKALQATIDPVQSQDYEEMSLEIDDF
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagagccaggagacagatggccccagatcctccatgccggctgagctccac
catccccactctgagtactctcagtggaagtttaaactgtttcgggtgaagtccatggag
aaggcccctctgcccagtgaaacacagcctgagaaaggagctttgttagagatctcacat
catgcagctccaaatatagagttagataatgctgtgagtccagggagtgttatgaaattg
tgcctcgggggaaaaagcaaggaaaatgtggagggccctggctggagggtagatatgaag
ctacaggagatggacacccacatgaaccaactcaggtgcttgtgccgtctctgtggaatg
accctgagaaaagtcaaaggaccggtgcacgacgttaacggggatctggatgagatcagc
agagctgccctgcgtaaaatgggctgcaagtttacaagctggccagaggtcatcctcaaa
gtcttcaaagtggatgtgacagaagacatagagtctgtccaacctcttctcttctgccat
cgctgctgggtggttgccatacgcggcggcggagtctgcagcttctccagaaccaaagtc
ccggaatggaaaccccactcttccccctgccatctttgctcccccaggaaaccttcattc
cagcggactggaaggaagaggcgaaaagccattcccaaagcccagagcctggcaaaaagg
accaggtgggactacagcgacagcattgccgtgggtgagaggagggctctgagaccgttc
ggagaccatcatcatgctcctgtgctccgggcgtgtaggaaaaccagcatccagagagag
caatgggtgaggaacatcacccactgccagaaagaccatgtgaataccaagctgatctct
gagaagctccctgtggacttcctcttttctttcacctgcctggtgtgtgaccacctgctc
tctgatccagtccagtccccctgtggacacctcttctgccgcagctgtattttaaaatat
aaccacgttctgggacctcactgcccggcctgcaacttgtcctgcgcccctgatgatctc
agcccacccaccaaaaccttcttatcagccctacattccctacctctgctctgccctagg
agcggctgcggcaagcaagtaaggttagactcgttcaaagctcattgtctgggccatgag
ctggatggacgggacccaaagcagcagtcatcagaaatcgacaactccctgcaagccaat
aaagggggaagaccccgtcagcacctgctgtcgcttacccgtcgtgcccagaagcatcgg
ctgagggaaatgaagaaccaggtgagggcgtttgcagacaaagaggaaggtggcgacctg
aagtctgtgtgtcaggctctgtttctgcttgcactgaggtctgcgaatgaacaccggcaa
gcagatgagctagaggccatgatgcaaggcagaggctttgggttgcatcctgctgtgtgc
ctggccattcgggtcaacactttcctgagctgcagccagtatcacaagatgtaccggact
gtcaaagccaccagtggccgccagatctttcagcccctgcactccctgcgagctgcagag
aaggagcttctccctggctttcacgagtttgaatggcagcccgctctcaagaatgtgtct
acatcttgcagtgttggcattattaatggagtctctggatgggcttcctcggtggatgac
ttcccagctgacaccatcactcggcggtttcgctatgatgtggcactggtgtcagcatta
aaagatctggaggaggacatcatggaggggctgagcgagagtgggatggaagacagcgct
tgcacctcaggcttcagtgtcatgatcaaggaatcctgtgatggcatgggcgatgtcagc
gagaagcacggtggaggaccagctgttcctgagaaggctgtacgtttttctttcactatt
atgtctatctccgtcctggcagacgaggaggagaaagaggttaccatcttcactgagcca
aagccaaactcagaactgtcctgtaagcccctttgcctgatgtttgtggatgagtcagac
catgagacgctcacagccgtcctggggcctatagttgcagagcgtaatgcaatgaaagag
agcaggctcatcgtatccatgggtggactacctcgctcctttcgctttcacttcagaggc
acgggatatgatgagaagatggtgcgtgagatggagggcctcgaggcctcagggtccacc
tacgtgtgcactctttgtgactccactcgggcagaggcctctcaaaacatggtgctacat
tccgtcacccgcagtcatgaagagaacctagatcggtacgaaatatggagaaccaacccc
ttttctgagtctgtagatgagctgcgagacagagtcaagggggtctctgccaagcccttc
atggagacccatttaacgctggacgcattgcactgcgacatcggcaatgccactgagttc
tacaaaatcttccaggatgagatcggagaggtgtacaaaaaggtcaaccccagtcgggag
gaacggcgcagctggagggcggccctggataaacagctgaggaagaagttgaagctgaga
ccggtgatgaggatgaatgggaactatgcccggaggctaatgacccaagaggctgtggag
gtggtgtgtgagctggtgccttcagaggagaggagggaggccctgagggagcttataagg
atctacctccagatgaagcctgtgtggcgcgcctcctgccctgccaaggagtgccccgac
cagctgtgccgctacagctttaactcccagcgctttgctgacattctctcctctacattt
aaatataggtacgatggaaagataaccaattacctgcacaagaccctggcccacgtgcct
gaaatcatagagagagatggctccataggagcttgggccagcgaagggaacgagtcagca
aacaaactgttcaggcgtttccggaagatgaacgctcgtcagtcaaaggcctttgagcta
gaggatgtgttgaaacatcactggctctacacttccaagctcttgcagaagtttatgcaa
gctcacaaggactctgccaaagctctgcaagctaccattgacccagtccagagccaggat
tatgaggaaatgtctctggaaattgatgacttttga
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