Perca flavescens (yellow perch): 114560699
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Entry
114560699 CDS
T07494
Symbol
chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pflv03036
]
114560699 (chd2)
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
114560699 (chd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
114560699
NCBI-ProteinID:
XP_028442048
LinkDB
All DBs
Position
8:24085360..24117133
Genome browser
AA seq
1845 aa
AA seq
DB search
MIVHASSNFLTVNTRTKDHPITDFQDTIMMKNKTKKQEDEGSTQSNASSNSASEESNRSA
SESGSQSESEHGSEQRRSHNSESNSSSESESHSESESGSAGSKSQQTTAEVKDKPVKKKE
RLADVKKMWDEHPDVYGVRRSNRSRQEPARLNIGAGGSSDSESESPKRKTSRAKKKENIW
KDDDSNDEEEEEEASNSTDSEQEEKKVRSRRLPARRPQTKSSTAKKQLSQKSRKSRNQDS
TAEEDDEDDEDDDDEDDDEDTPKRQTRKRGATKVKSYKEDQHDFETDSDDLIEMTGDAGE
EQQDDDSETIEKVMDTRTGKKGATGASTTGYAVQENGDPNEGFDPENDEGETHYLIKWKG
WSYIHNTWESMDSLIQQKVKGLKKLDNYKKKHDELSSWLKRASPEDVEFHNCQQELISDL
NKQFQIIERIIATKTGKTPGTAEFPSHSHKMPSSNEPEYLCKWMGLPYSECSWEDGALIG
KKFQHCIDSFINRNSSKTVPSKDCKVLKQRPRFVPLKKQPSYIGDDILQLRDYQLDGLNW
LAHSWCRCNSVILADEMGLGKTIQTISFLSYMFHQHQLYGPFIVVVPLSTLTSWQREFET
WAPDMNVVVYLGDVMSRKSIRDYEWVNHQTKRIRFNALLTTYEILLKDKGVLGNINWAFL
GVDEAHRLKNDDSLLYKTLMEFRSNHRLLITGTPLQNSLKELWSLLHFLMPDKFASWEDF
EDEHGKGTDNGYHSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVDMTAQQKQFYKWILT
RNYRALFKGTRGSSSGFLNIVMELKKCCNHSFLIKQPEDPETETQQEHLQSLVRGSGKLV
LLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLAKKRYTFQRLDGSIKGEIRKQALDHFN
AEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYR
LVTKGTVEEDIIERAKKKMVLDHLVIQRMDTTGRTVLDSNSGNTNSNPFNKEELTAILKF
GAEELFKEAEGEESEPQEMDIDEILRLAETRESDQGSSATDELLSQFKVANFSSMEESTP
EFADKSIREWDDIIPEEQRRKIEEEEKQREMEDIFMLPRSRSSNKRAQANDSDSDVGSKL
KHRSSGSESETDDSDDDKRPKKRGRPRARKNNVEGFTDAEIRRFIKAYKKFGSPLERLEA
IARDSELVDKSIADLKRLGELIHTSCVTAVQEHEEHLKENPVEAKGPGKRRGINIKISGV
QVNAKSIIQHEEEFEPLHKVVPSNPAERNKFNLTCRVKVAHFDVDWDLQDDIQLLLGTYE
HGFGNWDLIKTDPDLKLADKILPDDPSKKPQAKQLQARAEYLLKLLKKEQDSTDGTKTGE
EVKVRKRKPRVKKEKNLKDEQGNDISSPRLSDNPSEEGEVKDDGTEKSPAKKRQKKKDNK
ENKEKQGTPKKEKDGDKEKKGPKPRKEKAKGAKGKKTQGPVHITAGSDPIPIEGKEDDEL
DQETFSICKERMRPVKKALKQLDKPDEGLSDQEQLQHTRTCLLKIGDRISECLKAYSDPE
HVKIWRRNLWIFVSKFTEFGARKLHKLYKMAQKKRSHEEEKEQKKKDDSGGRVKNFRPES
CGSSRDSTGTSSSKPGSHSTQPGPHGHHRESYNSANKRHFSNDDSTCFIADRGDWQRDRK
YNYPSNSNQSWQGDRHHQYDRYKDHYGDRRPHGDSYRSSGSYRNNSSPRKRPYEQYSNDR
DHRGHRPYYDRHSDPKRRRPDEFRPNYHQGREGPLQDFRRMPEHRPAGPAGPEHYSRPFH
PDKPPPPQDPRSPQAQKSPQDSRSPPERPAEPNAVADPNWNNRKT
NT seq
5538 nt
NT seq
+upstream
nt +downstream
nt
atgatagttcacgcttcctctaactttttgaccgtaaataccaggacaaaagaccatcct
attacagattttcaggatactatcatgatgaagaataaaactaaaaaacaagaggatgaa
ggatcgactcaaagcaacgcatcaagcaattcagcctcagaggaatccaacagatctgcg
tcagagtctgggagtcagtcagagagcgagcatggcagtgagcagaggagatcccacaat
tctgagtcaaacagctcctcagagtcagagagtcactcagagtcggagagtggctctgca
gggtccaaatcacagcaaaccacagccgaagtgaaagacaaaccagttaaaaagaaggag
cgtctggctgatgtgaagaagatgtgggacgaacatccagatgtgtatggggtcaggagg
tcaaatcgcagtagacaggagccggctcgtttaaacattggagctgggggtagcagtgac
tctgagagtgaaagtcccaaaagaaaaacatcccgagctaagaagaaagaaaatatctgg
aaagatgatgactcaaatgatgaagaggaggaggaggaggcttccaacagtacagacagt
gagcaggaagagaaaaaagttagatccagacgacttcctgctagaagacctcagaccaaa
tcatcaacagccaaaaaacagctgtctcaaaaaagcaggaagtctagaaatcaggactca
actgctgaagaagatgacgaggacgacgaagacgatgatgacgaggacgacgacgaagac
actccaaagagacagactcgaaaaaggggtgcaacaaaagtcaaaagttataaagaggac
caacatgactttgaaacggactctgatgacctgattgaaatgacgggggacgcaggcgag
gagcagcaggatgatgacagtgagaccattgagaaggttatggacaccaggacaggcaaa
aaaggagccactggggcttccaccactgggtatgctgtgcaggaaaatggggacccaaat
gaaggctttgaccccgagaatgatgaaggggagactcactatctgatcaagtggaagggc
tggtcctacatccacaacacatgggagagcatggattctctgattcagcaaaaggtcaag
ggactaaagaaactggacaactacaaaaagaagcacgatgagctcagttcatggttgaag
agggcgtcccctgaggatgtagaatttcataactgccaacaggagctcatatctgactta
aacaagcagtttcagattattgagcggattatcgcaacaaaaacgggaaagacaccagga
actgctgaattcccctctcatagtcacaagatgccctcctccaatgagccagagtatcta
tgtaagtggatgggattgccctattcagagtgcagctgggaagatggagctttgattgga
aagaagtttcagcactgtatcgacagcttcataaaccgaaactccagtaaaaccgtcccc
tctaaagactgcaaggtgttaaagcaaagacccaggtttgttcctctgaagaaacagcca
tcatatattggagatgacatccttcagctgagagattatcagctggatgggttgaactgg
ttggctcactcctggtgcaggtgtaacagtgttatcctcgctgatgagatggggctcgga
aagaccatccagaccatctccttcctgtcgtacatgtttcaccaacatcagctgtatgga
ccctttatagtggtggtgcccctgtccactctcacctcctggcagagggagtttgaaacc
tgggccccggacatgaacgtggtggtctacctcggggatgtcatgagcaggaaatcgatc
cgtgactacgagtgggtgaaccatcaaacgaaaagaatacgtttcaatgcactattaacc
acttatgaaattctacttaaagacaagggggttcttgggaacatcaactgggcgtttctg
ggtgtggatgaagctcataggctgaagaatgacgactccctgctgtacaaaacattaatg
gagttcaggtccaaccacaggctcctcattactggcactccgctgcagaactccctcaaa
gagctctggtcactgttgcacttcctcatgcctgacaagtttgcttcctgggaggatttt
gaggatgaacacgggaaaggaacggataacggttatcatagtcttcacaaagtcctcgag
cccttccttctgcgacgtgtcaagaaagatgtggaaaaatctctccctgccaaggtggaa
cagatcctccgtgtagacatgacggcacagcagaaacaattctacaagtggattttaacg
aggaattacagagctcttttcaaaggcacccgaggcagctcctctggcttcctgaacata
gttatggagcttaagaagtgctgcaaccacagtttcctcattaaacagcctgaggatcca
gaaactgaaacccaacaggaacacctgcagagtctagtgaggggcagcgggaagctggtg
ctgctggacaagctgctgaccagactccgagaaagaggcaacagagtcctgatcttctcc
cagatggtcaggatgttggacattctggctgaatacctcgccaagaagcgctacacattc
cagcggctggacggttccataaagggagaaatccgaaagcaagcacttgaccactttaat
gcagaaggctcagaggacttctgcttcctgttgtcgaccagagctggaggtttaggaata
aacttggcctcagcagacaccgtagtcatctttgactctgactggaaccctcaaaacgac
ctgcaagcacaagccagggctcacaggatcggccagaagaaacaggtaaatatttatcga
ctggtcaccaaagggacagtggaggaggacattattgaaagggcaaagaagaagatggtt
ttggaccatcttgtcattcagagaatggacaccactggtcgaactgtactggacagcaac
tcgggaaacacaaattcaaacccgttcaataaagaagaactgactgctatcctcaagttt
ggtgcagaggagcttttcaaagaggcagaaggagaggagtctgaaccacaggagatggat
attgatgagatcttgaggctggctgaaacaagagaaagtgaccagggctcaagtgctacg
gatgaacttctatctcagtttaaggtggccaatttctccagcatggaagagagcacgcca
gagtttgcggataaatccatacgggaatgggatgatatcatccctgaagagcagcgacgc
aaaatagaggaggaggagaagcagcgggagatggaagacatcttcatgctgcccagaagc
aggagctctaacaagagggctcaggccaacgatagtgacagcgacgtgggctccaagctg
aaacaccgctcctcaggctctgaaagtgagactgacgatagcgatgacgacaagaggccg
aagaagagaggcagacccagagctcgcaaaaacaatgtggagggcttcactgatgcggag
atccgcaggttcattaaggcatacaagaaatttggatctccactcgaaaggttggaggcc
atcgcccgagattctgagctggttgataaatccatagcagacctgaagagacttggtgaa
ctgatccatactagttgtgtgactgcagtgcaggagcacgaggaacaccttaaggagaac
ccagttgaggccaaaggtcctgggaaacgccgaggaattaacatcaagatctcaggagtg
caggtcaacgccaagtccatcatccagcatgaggaagagtttgagcccctgcacaaagtt
gtgccctccaatcctgctgagagaaataagttcaatctgacatgcagggtcaaggtagcc
cactttgatgtagactgggatctgcaggatgacattcagctcttgcttggtacctatgag
cacggctttggcaactgggatctgatcaagacggaccctgaccttaaactcgctgataag
attctcccagacgatccaagcaagaagccccaggccaagcagttgcaggcgagagcggag
tatcttctgaagctgctgaagaaagaacaggacagtacagacgggactaaaacaggggag
gaggtcaaagtgaggaagaggaagcctcgggtaaaaaaggagaagaatctcaaggatgag
cagggcaacgacatctcctccccccgcctgtccgacaacccgtcggaggagggcgaggtc
aaggatgatggaacagagaagtctcccgccaagaaaagacaaaagaaaaaggataacaaa
gagaacaaagaaaaacagggaactcctaaaaaggagaaggatggagacaaagaaaaaaag
ggtcccaagcccagaaaagaaaaggctaaaggagccaaagggaagaagactcaaggtcca
gttcacattacggctgggtctgaccccattcccattgaaggaaaggaggatgatgaactc
gaccaggagactttcagtatttgtaaggagcgcatgaggccggtgaaaaaggccctgaag
cagctggacaaaccagatgagggtctgtcggaccaggagcagctccagcacactcgcaca
tgcctactaaagattggagaccgaatctcagagtgccttaaagcctacagtgaccctgaa
catgtcaaaatatggcggagaaacctctggatttttgtgtccaagtttacagagtttggt
gcaaggaagcttcacaagctttacaaaatggcacagaagaagcgatcacacgaggaagag
aaggagcaaaagaagaaggatgattctggagggagggtgaaaaacttcagaccagagtcc
tgtggttccagtcgagactccacgggtacgtcgtcctccaaacctggctctcactcgact
cagccaggccctcacggacaccacagagagtcgtacaactcggctaataagcggcacttt
agcaatgatgattctacatgtttcattgcagatagaggagactggcagagggaccgtaaa
tacaattacccaagtaacagcaaccagtcatggcagggagaccgacatcatcagtatgac
cgctataaggatcactatggggatcgacgtccacatggagactcgtaccgcagctcaggc
agttaccgcaacaacagctcccctcgaaaaaggccatatgagcagtacagcaacgaccgg
gaccacaggggtcatagaccatattatgacaggcattcggaccccaagagaagacgtccg
gatgaattccgtcccaactaccaccagggaagagaaggccctcttcaggacttcaggagg
atgccagagcacaggccggccggtccagccgggcccgagcactacagcaggcccttccac
cctgacaaacctcctccgccgcaggaccctcgctccccacaggctcagaagtctccccag
gactcccgctctccgccagagcggcctgcagagccaaacgcagtggcagatcctaactgg
aacaacaggaaaacataa
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integrated database retrieval system
