Perca flavescens (yellow perch): 114561026
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Entry
114561026 CDS
T07494
Symbol
neo1
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04350
TGF-beta signaling pathway
pflv04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
114561026 (neo1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
114561026 (neo1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pflv04515
]
114561026 (neo1)
Cell adhesion molecules [BR:
pflv04515
]
Immunoglobulin superfamily
DCC/UNC5 family
114561026 (neo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
NDNF
fn3_2
Fn3_VIN3
SusE
Sp38
EphA2_TM
DUF4834
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
114561026
NCBI-ProteinID:
XP_028442511
LinkDB
All DBs
Position
1:complement(13934971..14121522)
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AA seq
1472 aa
AA seq
DB search
MAERGALSLLSLLCLTFLYTETAAAKHVDKGSAAQPFSPFWFTVEPQDTLAIRGSSALLN
CSAHSDAATPARIEWKKDGTFMSLVSDERRNILPDGSLFFIHVVHSKHNKPDEGTYQCVA
TIDNLGSISSQTARLSVAGMPRFVSQPSPTTVHLGNNQVMACEVNSDLVPFTRWEKDRLP
LDLSTRLVQLPSGALAISNASEADAGLYRCLVENVGSSKSSDEAQLQILPETGEESKLEF
LVQPVSVNKAVGASVLLPCLVTGYPVPHIRWMFGDKLLEESEGRVEVLGGGSVQISNLTE
EDAGIYTCMAENTNGTIEAQAQLTIQVPPQFVKRPDNIYAYESMDIVFECEVSGSPAPTV
KWVKNGDAVIPSDYFKIIKEHNLQVLGLVKSDEGFYQCLAENDAGNIQSSAQLIILDHDV
ALPSFPPPSLTPNTTDHVTPGSGGVASPAGPSPSAPRDVVASLVSTRFIKLTWRPPAEPH
GDDITYSVFYSQEGTSRERVVNTSRPGEMQVTIQNLMPDTKYRFRVVAHNRNGQGESSAA
LKVATQAEVQVPGPAPNLQAVSNTPTSVSLSWDKPLTGNGDMLTYKLYYTDKSFGNEQDV
DVDSQSHTMTGLKKNTEYSFRVVANNKHGPGVSTDDVVVRTLSDVPSAAPQNLTLEVQNS
KGIMLRWQPPPLNGQNGEITGYKIRYRKGSRRSEAAETTGGTQLLKLIDGLERGTEYSFR
VSAMTVNGTGPATEWTTAETFESDLDESRVPDQPSSLHVRPLVNSIVVSWTPPDNQDIVV
RGYSIGYGIGSPHAQTIKVDYKQRYYTIEKLNPSSHYVITLKAYNNVGEGIPVYESAITR
PQSDPIDPDVDTYEIYPAPFTPVPDPSPMMPPVGVQASVLSHDTIKVTWADNSLPKNQKI
TDNRFYTVRWKTNIPANTKVKMANTTSLNHMVTGLKPNTLYEFSVMVTKGRRASTWSMTA
QGTTFETIPSSSPKDVTVVSKENKPRTIIVNWQPPSEANGKITGYIIYYSTDVNAEVHDW
VIEPVVGNRLTHQIQDLTLDTTYYFKIQARNSKGMGPMSEAVHFRTPKTSNVPPKQPSGN
QPLPEPGTVGVGGNSEGHILVIVIIISVGAFTIIVVVVGAFLCTRRTTSHQKKKRAASKS
SNGSHKYKGNSKDLKPPDLWIHHERLELKPMDKSPDPNPVMTETPIPRTSQDITPADSGL
DSNPHLQQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDAQPPQPVISAHPIHSLDNHH
HHYHMGSLASPTRSYLYHQGSGHPRPHACATPISHLDRVDSTESVRNTPSSEPLPPAAAS
SQASCPSEIMADPEGSYHGSTTTEEEPSYSSNLPPHRSAHPHAHAHPLKSFGVPAIPGTS
HPSYESPALPSTPLLAQTGPPTHPHVVKTACIGTLGRTRTPMVVTVPNAPDVPETSKMLE
DVDSSYEPDELTEEMAHLEGLMKDLNAITTAP
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcggggagctctgtcgctcctctctctcctctgtctcacctttctctacacg
gagaccgccgcggcaaagcatgtcgacaaaggttcagcagcgcagcccttcagccccttc
tggttcactgtggagccccaggacacactggccattcggggcagctctgcactgctcaac
tgctcggcccacagcgacgcagccacgccggctcgcatagagtggaagaaagatggcacc
ttcatgagcctggtttcggacgagagacgaaacatacttcccgacggctcgctgttcttc
atccacgtggtccactctaagcacaataaaccggacgagggcacctatcagtgcgttgcc
accatcgacaacctaggatccatttccagccagacggcccgtctctcagtagcagggatg
cccaggtttgtcagccagccatcgccgaccaccgtgcacctagggaacaaccaggtgatg
gcatgcgaggtcaactccgatctggtgcccttcaccaggtgggagaaagaccgcctgccg
ctggatcttagcaccagactggtccagctgcccagcggagccctggcgatcagcaacgcc
tcggaggcagacgccggcctataccgctgtctcgtggaaaatgtagggtcgtccaagtcc
agcgacgaagcccagctccaaattctgccagaaactggagaagagagtaagctggagttc
ctggtgcagcctgtgtctgtgaataaggcggtgggcgcaagcgtgctgctgccgtgcctg
gtcactggttaccctgtaccacacattcgttggatgtttggagacaagctgctggaagaa
agtgagggccgtgtggaggtgctgggaggaggcagtgtccagatatctaatctcacagag
gaggatgccggcatctacacctgcatggccgaaaataccaatggaaccattgaagcccag
gcccaactcaccatacaagttcctccccagtttgtcaagcggccagacaacatttatgcc
tatgagtccatggacatcgtctttgagtgtgaggtttctgggtcaccagctcccactgtc
aaatgggtcaagaatggagatgctgtcatccccagtgactacttcaaaataattaaggag
cacaacctgcaggttctgggtctggtcaagtccgacgagggtttctatcagtgcctggca
gaaaacgacgcaggcaacatccagtccagcgcccaactcatcatcttagatcacgatgta
gccctgccctctttccctcccccctcactgactcctaacactactgaccatgtaacgcca
ggctccggaggcgtagccagtccagcagggccctccccctctgccccccgagacgttgta
gcttcgttggtctccacccgcttcatcaagctgacctggcgcccgccagccgaaccccac
ggagacgacataacctactccgttttctacagccaagagggcaccagcagggagcgagta
gtgaataccagccgtccaggggagatgcaggtcaccatccagaacctcatgccagacacc
aaatatcgcttcagggttgtggcccacaaccgcaacggccagggagagagctctgcggcg
ctcaaagtggccacccaggcagaagtccaagtgcccggtcctgctcctaacctgcaggcg
gtgtccaacactccgacctctgtctctctcagctgggacaagcccctcactggcaacgga
gacatgctcacctacaagttgtactacacagacaaaagctttggcaacgaacaggacgtt
gacgtagatagtcagtcccacaccatgaccgggctgaagaagaacacggagtacagtttc
cgcgtggtggccaacaacaagcacggcccaggcgtctccaccgacgacgtcgtcgttcgc
acgttgtctgacgtaccaagtgctgctcctcaaaacctcactctggaggttcagaactca
aagggcatcatgcttcggtggcagcccccgccccttaacggccagaatggggagatcacc
ggctacaagatcagatacaggaaaggatcccggaggagtgaagcagccgagaccaccgga
ggcacccagcttttgaagctcatcgatggtctagagcgtgggacagaatactccttccgg
gtgtcggccatgactgtgaacggcacgggacctgccacggagtggaccacagcagagacg
tttgagagcgacctggatgaatcccgtgtgccagaccagcccagctctcttcatgtccgg
ccgctggtcaacagcatcgtggtgagctggacgccgccagacaaccaggacattgtggtg
cgcggttacagcatcggctatggcatcggcagtccccatgctcagaccatcaaagtggac
tacaagcagcgctactacactatagagaagctcaaccccagctcccactatgtgatcaca
ctgaaggcctacaataatgtgggtgaggggattcctgtgtatgagagtgccataaccaga
ccacagtcagaccccatagaccccgatgttgacacgtacgaaatctatcctgctccattc
accccagtaccagatccctctcccatgatgccacccgtgggtgttcaggcctccgtgctg
agccacgacaccatcaaggtgacctgggctgacaactcgctgcccaagaaccaaaagatc
acagataaccgcttctacacagtgcgctggaagaccaacatccctgccaacactaaagtg
aagatggctaacaccactagcctgaaccacatggtgacgggtctgaagcccaacacgctg
tacgagttctccgtcatggtcaccaaagggcgccgcgcaagcacgtggagcatgactgca
cagggcaccacctttgagaccattcccagctcctccccgaaagacgtgaccgtggtgagc
aaagagaacaaacctcgcactatcattgtcaactggcagcctccctctgaggccaatgga
aagatcactggctatatcatctactacagtacagatgtgaacgctgaggtccatgactgg
gttattgaaccagtggtgggcaaccgcctgacccaccagatccaggatctgacgctggac
accacctactacttcaagatccaggcccggaactcaaagggcatgggccccatgtctgag
gccgtacatttccgcactccaaagacctcaaatgttccaccgaagcagccatcaggcaac
caacccctaccggagcctgggactgttggggttggaggcaacagtgaaggtcacatcctg
gtcattgtcatcatcatctcagtgggagccttcaccatcatcgtagtggtggtgggggcc
ttcctgtgcacgcggcgaaccacgtcccaccagaaaaaaaagcgggctgcctcaaagtcc
tcaaacggctctcacaaatacaagggaaactccaaagacctgaagccacctgatctttgg
attcaccatgagaggctggagcttaaacccatggacaagtcgccagatcccaacccggtc
atgaccgaaacgcccatcccccgcacctcgcaggacatcacgccggctgatagcggcctg
gatagcaacccccacctgcagcagcggcgcaattcctaccgtggccacgaatcagaggac
agcatgtctacactagcaggccgacgagggatgaggcctaaaatgatgatgccttttgat
gcacagccgcctcagcctgtgattagtgctcaccccatccattcccttgataaccatcac
caccattatcacatgggaagcctggcgtcgccaacacgcagctacctctaccaccagggc
agcgggcacccgcgcccgcacgcctgtgccacccccatctcccatctagacagggtggac
tctacagaatcggtgaggaatacccccagttcagagcccctccctccagccgctgcctct
tcccaggcctcctgcccctctgagatcatggccgaccctgagggcagctaccacggctcc
accaccacagaggaggagcccagctactccagcaacctgcccccccaccgctcggcccac
ccgcacgcccacgcccacccgctcaagagcttcggcgtacctgcaatcccaggcaccagc
catccatcatacgagtcgcctgccctgcccagcactcccctgctcgcacagaccgggcct
cctactcacccccatgttgttaaaacagcctgtattggaacactaggaaggacacgaaca
ccgatggtcgtcactgtgcccaacgcccccgatgtgccggagaccagcaagatgctggaa
gatgtagacagcagctacgagcccgacgagctgaccgaggagatggcccacctcgagggc
ctcatgaaggacctgaacgccatcaccacagcgccatga
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