Perca flavescens (yellow perch): 114561119
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Entry
114561119 CDS
T07494
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv02010
ABC transporters
pflv04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
114561119
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
114561119
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pflv02000
]
114561119
Transporters [BR:
pflv02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
114561119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
Motif
Other DBs
NCBI-GeneID:
114561119
NCBI-ProteinID:
XP_028442644
LinkDB
All DBs
Position
9:24690964..24730459
Genome browser
AA seq
2375 aa
AA seq
DB search
MGVFRQLGLLLWKNITYRRRNKIQLIIELLWPLFLFVILISVRHSHPPYKQSQCHFPNKA
LPSAGTLPWIQGIICNINNPCFHSPTPGETLGQFGNFDNSILSRLFVDAQTVLSFSGNQR
FSGFQDLMESVRRLGERPGAWPNLPVEEYLRANETFSTFLLTNGSLSPVTVDQLLKARLN
FQVSVAGAQMQLKDLVCNASMLGEFLTVDGGEAAMKDLQTQLCNLPADVLREAERLFLSQ
LDFTKFFTRDRLMANAGDFRVISEAVTSVSQELAVLIDDLSSLSSFADMSAALRLLSPEN
RSALPRESFRAFSRIMCGHPEIGGERIPSLNWYEDNDIKSFLGTNGTEDTDMDHDNNTTP
FCKSLIRGLESNPLSRIVWRGIKPLFIGKLLYTPDTPAVQQVMKEVQRVNKTFEDLQVLQ
ELNEAWMEVGPQIKNYMESSVEIQLLQDLLRRPEVAVLVNLRLENTSWTASRIARFLSTP
SPDTPRKPGAAPTWLDVYNDLSHTITTLAQVTECFSLNKLEGLETEGQMIDRALELLEDR
QFWAGVVFLLPNSSSPNLPPHITYKIRMDIDDVTRTNKIKDRFWDPGPAADPFNDMRYIW
GGFVYVQDLVERAVSRILTGVQQTTGIYIQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIY
SVAMIIKGVVYEKEARLKETMRIMGLGSGTLWFSWFISSIIPFLVSAGLLIALLKWGDIL
PYSDPTVVFFFLTAFANATIMQCFLISTFFSKANLAAACGGLIYFGLYLPYVLCVAWRDR
LNTTYRVLASFLSPVAFGFGCEYFSQYEEQGVGIQWYNLHSSPVEGDSYRFTTSIVMLYV
DAFIYATAAWYIEAVFPGEYGIPRPWYFIFQMNYWGGVPLEAGLPIPPAPTEQDEDNIEP
EPVNLVLGVSVRNLVKIYKKGAKLAVNHLNLKFYEGQITSFLGHNGAGKTTTISVLTGLF
PPTSGTVYIKGMDIRYDMDIIRRTLGVCPQHNVLFDILTVEEHVWFYGCLKGLSEAEVKA
ELDTLLEDVGLLHKRHEQTKNLSGGMQRKLSVAIAFVGGSKVVVLDEPTAGVDPYSRRGI
WDLLLKYRKDRTIILSTHYMDEAELLGDRIAIISQGKLCCCGSPLFLKSRLGSGYYLTVV
KREGLDTSTPSSTSICTSTSISTNKLPPLKDSESSMSEDTGLGSEDSSSYLAALLSLAQH
HIPGARLVEDSGREAVVNLPQAAAKDSSLAVFLSELDQRLIEMGISSYGLSDSTLEEIFL
RVAEETGVDAEPELQAESPHRQQPSAGQRAQSQNAEEPETGRKRLRKQEPQETDLLSGEG
RGGIPLTGWWLTWQQLRALFIKRWLYARRSRRGFFAQIVLPAMFVLVALLFSLIVPPFGK
YPALQLQPWMYGEQYTFYSNDAPGNPAIENLLEALLDQPGFGTKCMEKEEEGNSTSPQCE
GVQGGLFRRPQMSYSTWQMFNRGNWSRDAPSPDCQCSTEDVRRMLPDCPQGAGGMPPPQI
KRLTGDILQNLTSYNISDYLVKTYSQILKKSLKTKKWVNEFRYGGFSLGGSATQTLSQVH
LVQDSIMAIRTRYRVPQNSSLDHLLNRLPDVLGGLNSQNNVKVWYNNKGWHAMVSFVNVM
NNGLLRASLPPGPERKKHGITAYNHPLNLTKEQLTEMAMMTTSVDVLVSICVIFAMSFVP
ASFVLFLIEERVSKAKHLQFVSGVKPILYWLANFTWDMLNYTVPATMVVLIFICFQQQSY
VSETNLPALVLLLLLYGWSITPLMYPASFVFTVPSTAYVVLTSINLFIGINGSIATFVLE
LFVDEHLNEVNRILKKVFLIFPHFCLGRGLIDMAKNQAMADAFQRLGTKQTLDPLQWDFV
GKNLFAMAAEGVIFFIFTILLQYKFFIRFRPWWAKPEMPPLGPEDEDVARERERVISGKA
QSDILTMIDLSKVYKSGRKPAVDRLCLGIPRGECFGLLGVNGAGKTSTFRMLTGDTAITY
GEALLNHHSVLTEMERVHQLMGYCPQFDAISDLLTGREHLELYARLRGVPEESVTKVAQW
GVKKLGLTQYAEREAGGYSGGNKRKLSTAISLIGAPPVIFLDEPTTGMDPKAKRFLWNCI
LSVTKEGRAVVLTSHSMEECEALCTRMAIMVNGRFQCLGSVQHLKNRFGNGYTIILRLVD
TNSNPDSCPISTYMKSSFPSIELKERHQSVLQYQLPSHACCLARVFEVLANNYEEMGVID
FSVSQTTLDQVFVNFAKEQTDDDFLTDVVISNLTTLHTRINTPTIQPQPPITPPHSSKIP
QQHGKSSDSKPKEGKSKKPKVSKGKANGEKSSSTAMTRIPQREAKARRTSRRGSSGSDSS
NDGVQGESSKHREDSSSKNPSALFIVDGNTQDSTL
NT seq
7128 nt
NT seq
+upstream
nt +downstream
nt
atgggggttttccgacagcttggcctcctgctctggaagaacattacataccgcaggagg
aacaagatccagctgattatcgagctcctctggccgctcttcctctttgtcatcctcatc
tctgttcgtcattcacaccctccctacaaacagagccaatgtcactttccaaacaaagcc
ttgccatcagcaggcaccttgccctggattcagggcattatctgcaacatcaacaacccc
tgcttccacagcccaacaccaggggagacactgggccaatttggcaactttgacaactcc
atactgtctcgtcttttcgtggacgcacagactgttctgtccttcagtggaaaccagaga
ttctcaggctttcaggacctgatggagagtgtccgaaggctgggagagagacctggagcc
tggccaaatctcccagtagaagaatacctgagagccaatgagacgttctccaccttcctc
ctgaccaatggcagcctgtcgcctgtgactgtggaccagctgctgaaggctcgtctcaat
tttcaggtttcagtggctggagctcagatgcagctgaaggacttggtgtgtaacgcgagc
atgttgggagagtttttgacagtggatggaggagaagccgccatgaaggatctccagact
cagctgtgtaacctgccagctgatgtcctgcgggaagccgaacgccttttcctctctcag
ctcgactttaccaagttcttcacaagagaccgtctgatggcaaatgccggagacttcagg
gtcatcagtgaggctgtcacctccgtttcccaggagctggctgtcctcatcgatgatttg
tcctctctctccagctttgcggacatgagcgcagcgcttcgtcttctgtctccagagaat
cgctcagcgttgcccagggagagttttcgtgctttttcaaggatcatgtgcggtcaccct
gagattggcggtgagcgcatcccatcgctcaactggtatgaggacaatgacatcaagtcc
ttcttagggacaaacggcactgaagacacagacatggaccatgacaacaacaccactcca
ttctgtaaaagtttgatccgaggtcttgagtccaaccctctgtctcgcattgtgtggcga
ggaataaaacctctgtttattggaaaactgctgtacacaccagacactcctgcagtacaa
caagtcatgaaagaggtacagagagtgaacaagacattcgaggacctgcaggtcctccag
gagctgaatgaagcctggatggaggtgggaccacaaatcaagaattacatggagagcagt
gtggagattcagctgctgcaggatttgttgaggcggccagaggtcgctgttctggtcaac
ctgcgtctggagaacacgtcctggacagcctcgcggatcgcacgtttcctgtcaacaccc
tcgccagacaccccaaggaagcccggagctgcgcctacctggctggacgtctacaacgac
ctcagccacaccatcaccacgctcgcacaagtcactgagtgtttctctctgaacaagctg
gaggggttggagactgagggtcagatgattgacagggctttggagctactggaagacagg
cagttttgggcaggtgtggttttcctgctgcccaactcctcatcccctaacctgccgccc
cacataacctacaaaatccgaatggacattgatgatgtgactcggactaacaagatcaag
gacaggttttgggatcctggtccagcagccgacccatttaatgacatgcgctacatttgg
ggcggcttcgtgtacgtccaggacctggtggagcgagctgtgagccgcatcctgactgga
gttcaacaaacaaccggcatctacatccagcagatgccctacccctgctatgtggatgat
gttttccttcgagtgctgaaccgctctctgccactcttcatgacactggcctggatctac
tcggtggccatgatcatcaaaggcgtggtgtacgagaaggaggcgaggctgaaggaaacc
atgaggattatgggtctgggatcaggaacgctgtggttcagctggttcatcagcagcatc
atccctttcctggtctctgcagggctccttattgctctgctcaagtggggggacatcctg
ccatacagcgatccaactgttgtgtttttctttctgacggcatttgccaacgccaccatc
atgcagtgtttcctcatcagtaccttcttctctaaagccaacttggctgctgcgtgtgga
gggctgatctacttcgggctttacctgccatacgtactgtgtgtagcctggagagaccgc
ctcaacaccacctacagagtccttgctagtttcctgtcccctgtggcctttggcttcggc
tgtgagtatttctctcagtatgaagagcaaggcgtgggcatccagtggtacaacctccac
tccagcccggtggaaggagactcataccgcttcaccacctctatagtcatgctttatgtg
gacgccttcatctacgccaccgcagcctggtacattgaggcagtgtttcctggtgaatat
gggatccccaggccctggtacttcatcttccagatgaactactggggtggagttcccctc
gaggcgggcttaccgatcccccccgcacccacagaacaggatgaagataacattgaacca
gaacctgttaacctggtcctgggtgtgagcgtcagaaacttggtgaaaatctacaagaag
ggagccaaactggccgtcaatcacctcaacctgaagttctacgaggggcagatcacctct
ttcctcggccacaacggagccggcaaaaccaccaccatatctgtcctgactggcctgttc
ccacccacctcgggcactgtgtacatcaaggggatggacatccgctatgacatggacatt
atccggaggacactgggagtttgtccacaacacaatgtcctgtttgacatactaacagtg
gaggagcatgtgtggttttatgggtgtctgaagggtttatctgaagcagaagtaaaagct
gagctggacactctgctggaagacgtcggcctgctgcacaaacgacatgaacagaccaaa
aacctctctggtggcatgcagaggaagctgtctgtggcgatcgcgtttgttggaggctct
aaagtggttgttctggatgaacccacagccggcgttgatccttactcccgcagagggatc
tgggatctactgcttaaataccgcaaagaccggaccatcatcctgtccacccactacatg
gacgaggcagagttgctcggtgaccggatcgctatcatctcacaggggaagctgtgctgc
tgtggctcaccgctcttcctcaaatcccgccttggatctggctattacctcactgtggtg
aagagggagggactggacaccagcactcccagcagtaccagtatctgcaccagtaccagc
atcagtaccaacaagctgcctcctctcaaggacagtgagtcgtccatgagtgaagacacc
ggcctgggaagcgaggatagcagttcatacctggcggcgttgctttccctggcacagcat
cacatcccgggtgcgaggctggtggaggactcagggcgcgaggcggtggtcaacctgccg
caagcggctgccaaggacagcagcctggccgtcttcctgtctgaactggatcagagactg
atcgaaatgggcatcagcagctatggcctgtcagacagcacactggaggagatctttttg
cgagtggcggaagaaaccggcgtggatgctgaaccagagctgcaggctgaatctccccac
aggcagcagccatcagctggacagagggctcagagtcaaaatgctgaagaaccagagaca
ggaaggaaaaggctccgtaagcaagaacctcaggagacagacctgctgagtggagaaggc
cgaggtgggatccccctgaccggctggtggctgacctggcagcagctgagagctctcttc
atcaaacgctggctttatgctcgaaggagccgcaggggcttcttcgctcagattgtcctg
cctgctatgttcgtgctggtcgctctgctcttcagcctcattgttcctccgtttgggaag
tatccagctctgcagctccagccctggatgtacggagaacaatacaccttctacagcaac
gacgcacctgggaacccagccattgagaacctgttggaggctctgctggaccagccaggt
tttggtaccaagtgcatggagaaagaggaagaaggcaacagcacgagtcctcagtgtgaa
ggcgtgcagggcggcctattcaggcggccacagatgtcctactccacctggcaaatgttc
aacagaggcaactggagccgagacgcaccgtctcctgactgtcagtgtagcacagaggat
gtccgccggatgctccccgactgcccgcagggtgccggtggaatgccgcctccacagatt
aagaggctgactggagacatcctacaaaatctgacaagttataacatctctgattacctg
gtgaaaacctactctcagatcctcaagaaaagcctaaaaaccaagaagtgggtgaatgaa
ttcagatacggaggtttctccctcgggggcagcgccactcagactttatcccaggtccac
cttgtccaagactcaatcatggcaatcaggactcgttatcgagttccgcagaacagttca
ctggatcatctgctaaacagacttccagatgttctaggaggactgaacagtcaaaacaat
gtcaaggtgtggtacaataacaaaggatggcatgccatggtgtcatttgtcaacgtgatg
aacaatggcctgctgagagcgagtctgccaccaggtccagagaggaaaaagcacggcatc
actgcctacaaccacccgctcaacctcaccaaggaacaactcacggaaatggccatgatg
accacatcagtggatgttctggtttctatctgtgtgatctttgccatgtcctttgtgccg
gcgagcttcgtcctttttctgattgaggagcgagtcagcaaagccaaacaccttcagttt
gtcagcggggtcaaaccgatcctctactggctggccaacttcacctgggacatgttgaac
tacacggtcccagccaccatggtggtgctgatcttcatctgtttccagcagcagtcgtac
gtctcagagaccaacctgcctgctctcgtcctgctcctcctcctctatgggtggtccatt
acccctctgatgtacccagcatcctttgtgttcaccgtccccagcacagcttatgtggtt
ctgacctccatcaacctcttcattggaatcaacggcagcattgccaccttcgtcctggag
ctgtttgttgacgagcatctgaacgaggtgaacaggatcctgaagaaggtgtttctcatc
ttccctcatttctgcctgggacgaggactcatcgacatggccaaaaaccaggccatggca
gacgccttccagagactgggcacaaagcagaccctggaccctcttcagtgggactttgta
gggaagaacctgtttgcgatggcagctgaaggtgttatattcttcatcttcaccatactg
ctgcagtacaagttcttcattcgcttcaggccgtggtgggccaagcctgagatgcctcct
cttggtccagaggacgaggacgtcgccagggagagagagagggtcataagtggcaaagcc
cagtcagacatcctcaccatgatcgacctgagcaaggtttataaatcaggcaggaagccg
gcagtggatcgtctctgcctcgggatccctcgtggtgagtgttttggcctgctgggggtg
aacggagcagggaagacctctacctttcgcatgctgaccggagacacggccatcacctat
ggagaggctttgcttaatcaccacagtgtgctgacagagatggagcgagtccaccagctg
atgggttactgtccacagtttgacgccatcagtgacctgctgacgggtcgggaacatctg
gagctgtacgcccgcctacggggagtgccagaggagtctgtcaccaaggtggcgcagtgg
ggcgtgaagaagctgggactgacccagtacgctgagcgggaggctggaggctacagcgga
ggcaacaagagaaaactctccactgccatctccctcatcggggctccgcctgttatattc
ctggatgagcccaccactggcatggaccctaaagccaaaaggtttctgtggaactgcatc
ctcagcgtcactaaagagggaagagctgtagttctgacctcccacagtatggaggaatgt
gaggctctctgcaccagaatggcaatcatggtgaacggcagattccagtgtctcggatct
gtacagcacctgaaaaacaggtttggtaatggctacaccatcatccttcgtttggtggat
actaactccaacccagactcgtgccccatcagcacctatatgaagagctcttttcccagc
atcgagctgaaggagcgccaccagagcgtgctgcagtaccagctgccctcacatgcctgc
tgcctggctcgtgtcttcgaagtgctggccaacaactatgaggagatgggcgtcattgac
ttctctgtttcacagactaccctggaccaggtgtttgtcaactttgccaaagagcagacg
gatgacgacttcctcacagatgtggtcatcagcaacctcactacactgcacaccaggatt
aacactcccaccatccaaccacagccgccaatcactccccctcattcaagcaagattcca
cagcagcatgggaaatcgtctgacagcaaaccaaaagagggtaaatcaaagaagccaaaa
gttagcaagggcaaagctaacggagagaaaagcagcagtacggcaatgaccagaatacct
cagagagaggcgaaggctcggagaacaagccggaggggcagcagtggatcagacagcagt
aacgatggagttcagggagaatccagtaaacacagagaagacagctccagtaaaaatcct
tctgcactctttatagtcgacggcaacacacaggacagcacactgtaa
DBGET
integrated database retrieval system
