Perca flavescens (yellow perch): 114561141
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Entry
114561141 CDS
T07494
Symbol
comp
Name
(RefSeq) cartilage oligomeric matrix protein
KO
K04659
thrombospondin 2/3/4/5
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04145
Phagosome
pflv04510
Focal adhesion
pflv04512
ECM-receptor interaction
pflv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114561141 (comp)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
114561141 (comp)
09144 Cellular community - eukaryotes
04510 Focal adhesion
114561141 (comp)
09142 Cell motility
04820 Cytoskeleton in muscle cells
114561141 (comp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflv04131
]
114561141 (comp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pflv04147
]
114561141 (comp)
00536 Glycosaminoglycan binding proteins [BR:
pflv00536
]
114561141 (comp)
Membrane trafficking [BR:
pflv04131
]
Endocytosis
Phagocytosis
Opsonins
114561141 (comp)
Exosome [BR:
pflv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
114561141 (comp)
Exosomal proteins of colorectal cancer cells
114561141 (comp)
Exosomal proteins of bladder cancer cells
114561141 (comp)
Glycosaminoglycan binding proteins [BR:
pflv00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114561141 (comp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
COMP
EGF_3
EGF
cEGF
Peptidase_M50B
Motif
Other DBs
NCBI-GeneID:
114561141
NCBI-ProteinID:
XP_028442696
LinkDB
All DBs
Position
9:complement(24575627..24589064)
Genome browser
AA seq
748 aa
AA seq
DB search
MLWFLMLNCVLCMGGHTAAGQRDGEIISQIKMTNLALAEIKELLKQQIKEIVFLKNTVME
CEACGMGGMQPRPSCMPNPCHPGVKCKETPQGTKCGPCPDGMEGNGTHCTDVDECTVMPC
HMGVRCINTSPGFRCGTCPAGYTGPQVQGVGLAYATANKQVCKDINECEGLNNGGCVENS
VCMNTPGSFRCGPCKTGYVGDQRRGCKPERACGNGQPNPCHASAECIVHREGKIECQCGV
GWAGNGYLCGADIDIDGFPDEKLACPEMNCNKDNCVTVPNSGQEDADLDGIGDACDEDAD
GDGILNMQDNCVLVPNVDQRNVDEDDFGDACDNCRAVKNNDQKDTDVDKFGDECDEDIDG
DGILNHLDNCKRVPNADQKDRDGDKVGDACDSCPYVPNPEQTDVDNDLIGDPCDTNKDSD
GDGHQDSRDNCPAVINSSQLDTDKDGMGDECDDDDDNDGIPDLLPPGPDNCRLIPNPLQE
DSNGDGVGNICEKDFDNDTIVDTIDVCPENAEVTLTDFREYQTVVLDPEGDAQIDPNWVV
LNQGREIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNTVTDDDYAGFIFGYQDSSSFYVVM
WKQVEQIYWQANPFRAVAEPGIQLKAVKSNTGPGENLRNALWHTGDTSDQVKLLWKDARN
VGWKDKTSYRWFLQHRPADGYIRVRFFEGPQMVADTGVIIDTTMRGGRLGVFCFSQENII
WANLRYRCNDTLPEDFDTYRAEQVRLVA
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggtttctgatgctgaactgtgtgctctgcatgggaggacacactgcagcggga
cagagagatggagaaattatcagtcagattaaaatgacgaaccttgcactggctgagatt
aaagagcttctgaaacaacagataaaagaaatagtcttcctgaagaacacagtgatggag
tgtgaagcctgtgggatgggaggaatgcagcctcgtccctcctgcatgcccaacccctgc
cacccaggggtgaagtgtaaggagacacctcagggtacaaagtgtggaccctgtcctgac
ggtatggagggcaacggtacccactgcactgatgtggacgagtgtactgtgatgccgtgt
cacatgggcgtgcgctgcataaacacgtccccgggtttccggtgcggtacctgtcctgct
ggatacaccggcccccaagtccagggcgtcggccttgcctacgccaccgccaacaaacag
gtgtgcaaagatatcaatgagtgtgaaggcctcaacaatggaggctgtgtggagaactct
gtctgtatgaacacccctggctcgttcaggtgtggtccctgtaagacgggctacgttggg
gaccagcggcgtggctgtaagccggagagagcctgtggaaacggccaacccaacccctgt
cacgccagcgctgagtgcattgtccatcgagagggtaaaatcgagtgtcagtgcggagtg
ggatgggctggcaatggctacctctgcggggccgacattgacatcgatggtttccctgat
gagaagctggcctgtcctgagatgaactgcaacaaggataattgtgttactgttcccaac
tctggtcaagaagatgctgaccttgatggaattggagacgcctgtgatgaggatgcagat
ggggatgggatcctcaacatgcaggataactgcgtgttggtgcctaacgtggaccagagg
aacgttgatgaagacgactttggcgacgcctgcgacaactgtcgcgccgtcaaaaacaac
gaccaaaaagacacagatgtggacaaatttggtgatgagtgtgatgaagacatagatggg
gatggaatcctcaatcacctggataactgcaaaagggttcccaacgctgaccagaaagat
cgcgatggagacaaagtgggagacgcctgcgacagctgtccttatgttccaaaccctgag
cagacggatgtggacaacgacttgattggagacccctgtgacaccaacaaggacagtgat
ggagacggtcaccaagactcccgggacaactgtccagccgtcatcaacagctcccagctg
gacaccgacaaggacggcatgggagacgagtgtgatgatgacgatgataacgacggcatc
ccagacctgctgccacctggtccggataactgccgtctgatccccaaccctctgcaggag
gactctaacggtgacggtgtgggcaacatatgcgagaaggattttgacaacgacacgatc
gtcgacaccatcgatgtttgtccagaaaacgctgaggtcaccctcaccgacttcagggag
taccagaccgtcgttttagacccggagggagacgcacagatcgaccccaactgggtggtg
ctcaaccagggaagagagatcgtccagactatgaacagtgatcctgggttggctgttggt
tacacggctttcagcggtgtggattttgaagggacgtttcatgttaacacagtaacggac
gatgactacgcaggatttatcttcgggtaccaggacagctccagtttctacgtggtgatg
tggaagcaggtggaacagatctactggcaggcaaacccgttcagagccgttgcagaacca
ggcatccaactgaaggctgtcaagtcaaacacgggtcctggtgaaaacctgaggaatgcc
ctgtggcacaccggtgacaccagtgaccaggtcaaactcctgtggaaagatgctcgcaat
gtgggctggaaggacaagacttcttaccgctggttcctccaacaccgacccgcagacggc
tacatcagagttcgtttctttgagggtcctcagatggtggcagacacaggcgtcatcata
gacaccacaatgaggggaggtcgactgggagtcttctgcttctcccaggagaacatcatc
tgggccaacctgcgttatcgctgcaacgacactcttcctgaggactttgacacctacaga
gccgagcaggtccggctggtggcctga
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