Perca flavescens (yellow perch): 114561159
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Entry
114561159 CDS
T07494
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114561159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pflv03021
]
114561159
03036 Chromosome and associated proteins [BR:
pflv03036
]
114561159
Transcription machinery [BR:
pflv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
114561159
Coactivators
SAGA/TFTC/STAGA complex
114561159
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
114561159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
114561159
NCBI-ProteinID:
XP_028442738
LinkDB
All DBs
Position
1:35474428..35563657
Genome browser
AA seq
1032 aa
AA seq
DB search
MAGASDPLEDMLFSEVDEKAVSDLVGSLESQLADQSSPAGKTDENGGAGSVAPANHHLGK
TLPAPVGTTTLEQQQQGRRYKPEMRQEIKSKDVSLDKTVTSPSLGCTPSFGEPPTTSAAC
VNATSSGSQSHGASITTLTASGVSTLAPTPASISTTSNRGSKVSPGTGETSTEGNPPRKR
ITTPRRSASARIKSLNGAAVTTRRNSNTAVADNVNVSSVDTSATNVTPNSTSPGTSSINT
STFTLSNANLPVGQSAIALDRGTPTIALHRLPSHIVASIAQNGNGTNVSALVQQVARIGP
ITSSTSQGGHSKTVTETGASKTDDCQSKIVMSSQSGNVNSVISTVPSAPSVVTPTTTTAA
AATTTTTVTQPLSSATAAACVTGVTASSVCGTGQTTSVTTTISMVRPTAPSPTPAVATSA
QSQPRPGLTAPQRIVAPQLIVRPPQQQTTIQLPSGFTIPPGMVLVRTELGQLVMVPQQAL
AQAQAQAQAQAQNNISPRPATPTTGPSFRVTTPQKGPVAPAVAVTAPQQTPVVMAPQAPA
PAQAASQPVQPPQTGITANPGGPVVSQEMQENVKKCKNFLATLIKLASHNSPSPETSKNV
KSLVQDLLDAKIEPEEFTSRLQTELKSSPQPYLVPFLKKSLPALRLSLLNSQQSPTPLPQ
QGVKPAPGGPPPAIVAGPAVRIRHPNSVSITTGASALPAGTLGHAAGMGIKAAGAVSGQV
RMPVVITQSVRAQGTMGKGGIVQAGKSPVGLSVHYSGNQKNKLNDPGGGSFRDDDDINDV
ASMAGVNLNEESARILATNSELVGTHIRSCKDEAFLHPGLLHRRILETAKKFGVTEVPME
AVTFISHATQSRLRTVVEKVSTIAQHRLDSCKDDECYEQSADVRSQLRFFEQLERMEKQR
KDEQEREILLKAAKSRSRQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKK
RKMDSPGNTPSGTEVSGSTAGSLASSTSTPSTSSRQYTRQRITRVNLRDLIFYMEQERET
AHSLLLYRALLK
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccccctggaagatatgctcttttcggaggtggatgaaaaagct
gtgagcgacctagtgggctcgttggagtcacagcttgctgaccaaagcagcccagcaggt
aaaacagacgaaaacggaggcgctggctcagtggcccccgctaaccatcacttaggaaaa
acgctgccagctccagtgggcaccacaacactagaacaacaacaacaaggacggcgttat
aaacccgaaatgcgccaggagatcaagtctaaagacgttagcctggataaaactgtcaca
tctccttctctgggctgtaccccttcttttggcgagcctcccaccacttcggctgcttgt
gtgaacgccaccagcagcggttcgcaatcacatggagcatccatcacaacactgaccgca
tctggtgtgtcaactttggcaccgacgccagccagcatcagcaccacatccaaccggggg
tctaaggttagccccggcacaggtgagacgtcgacagaaggtaacccaccgagaaaacgc
ataaccacgccacggaggagcgcttcggctcggataaagagtttgaacggcgcagctgta
acgactagaaggaacagcaacacagcggtggctgacaacgttaacgttagctctgtggat
accagtgcaactaacgtcacaccaaactccacttcaccggggacatcctctattaacact
tcgactttcaccctgtcaaacgctaacctccccgtagggcagtcggctattgctttggac
cgggggactccaaccattgctttgcatagacttccgagtcatattgtagcgagtatagcc
caaaacggcaacgggaccaatgtttcggccttggtccagcaggtcgctcgcatcggaccc
atcacctcctcaacttcacaggggggccacagcaaaacggtcacagaaactggggcttcc
aaaacagacgattgtcagtccaaaattgtaatgtcaagccagtctggtaatgtcaactct
gtaataagcactgttccctctgcgccttctgttgtcacaccaacaacaactacagcagca
gcagctacaacaaccacaacagtaacccagcctttgagctctgctacagctgctgcctgt
gttacaggggtgacagcaagttctgtatgtggaactggtcaaactacatcagtgactacc
actattagcatggtcaggcccacagccccctccccaacacctgctgtggccacctccgca
cagtctcagccccgtcctggacttaccgcacctcaaaggatcgtagccccccagctgatt
gtcagaccacctcagcagcagacgaccattcagctgccctctgggtttaccatcccaccg
gggatggtgttggtacgcacggagttgggccagctagtgatggttcctcagcaagctttg
gctcaagctcaggctcaggctcaggctcaggcccagaacaacatctctccacgaccggcc
acccccacaacaggaccatccttcagagtaacaactcctcagaagggccccgtggcaccg
gccgtggctgtgacggctccgcagcagacccccgtggttatggccccccaggccccggcc
ccggcccaggctgcctcccagccagtgcagcctccgcagacgggcatcaccgcgaacccc
ggaggtcctgtcgtgtcccaggaaatgcaagagaatgtcaagaagtgtaagaatttcctg
gccacacttatcaagctggcatctcacaactctccttcacctgagacttccaagaacgtc
aaatctctggttcaggacctgctggatgcgaagattgaaccggaggagttcaccagccgg
ctgcagactgagctcaaatcgtctccacagccttacctggtgccttttctcaagaagagc
ctcccggccctgaggctatctttgctgaatagtcagcagtccccgacaccgctcccgcag
cagggagtcaaaccagcacccggcggcccccctcctgccattgtggctgggccagctgtc
cgcatacgccaccctaacagtgtcagcatcactacgggtgccagcgctctgcccgctggg
acgctcggacatgcagctggcatgggtatcaaggcagcaggcgctgtcagtggccaggtt
cggatgcccgtggtgatcacacagtctgtcagagcgcaaggcacgatggggaagggaggc
atcgtccaagcaggcaaaagtcccgtgggcctttctgttcactactctgggaatcagaaa
aacaagctcaacgaccccggaggaggttctttcagggatgatgatgacatcaatgacgta
gcttccatggccggggtgaacctgaatgaggagagcgcaagaatactcgccaccaattcc
gaactagtgggaacacacatccgctcatgtaaagacgaggcctttctccacccgggactt
ctccatcgacgaattctggaaacagctaagaagtttggcgtcacagaggtccctatggag
gcggttacattcatctcacatgccacacagtcacgacttcgaactgttgtagaaaaggtt
tctaccatcgcacagcaccgactggactcttgtaaggatgacgagtgctacgagcagtcg
gcagacgttcgctctcagcttcgatttttcgagcagctggagagaatggagaagcagagg
aaggacgagcaggagagagagatcctgttaaaagccgctaaaagtcgctccaggcaagag
gacccagagcaagctcgactgaaacagaaagctaaggagatgcaacaacaggaactggca
cagatgaggcagcgagatgccaaccttacagcactagccgccatcggaccccgcaaaaaa
cgtaaaatggattcaccagggaacaccccatcagggaccgaggtttcaggcagcacggcg
ggctccctggccagctccacctccaccccgtccacctcatcacgccagtacacacggcaa
cgcatcactcgcgtcaacctcagggacttaattttctacatggagcaggagagagagaca
gcccactcgctcctcctttaccgcgccctgctcaagtag
DBGET
integrated database retrieval system
