Perca flavescens (yellow perch): 114561190
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Entry
114561190 CDS
T07494
Symbol
fxr1
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflv03019
]
114561190 (fxr1)
Messenger RNA biogenesis [BR:
pflv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
114561190 (fxr1)
Factors involved in mRNA localization
Other mRNA localization factors
114561190 (fxr1)
mRNA cycle factors
Stress granule specific factors
114561190 (fxr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
FXR_C1
KH_9
Tudor_FRX1
KH_1
Agenet
FXR_C3
KH-I_KHDC4-BBP
Tudor_2
Motif
Other DBs
NCBI-GeneID:
114561190
NCBI-ProteinID:
XP_028442794
LinkDB
All DBs
Position
9:complement(30557912..30571801)
Genome browser
AA seq
735 aa
AA seq
DB search
MEELVVEVRGSNGAYYKGVVKDIHDDSLTIAFENNWQPERQVPFNDVRMPPPADAKKEIG
EGEEVEILSRANDQEPCGWWLAKVRMMKGAFYVIEYAACDATYNEIVTFERLRPVNTNKA
ITKNSFHKCTVPVPQDLQEACQNENAHKDFKKAVGACRISYCPETSQLLIVSTNETTVKR
VSLLSDMHLRSIRTKLLLMSRNHEATKHLETSRQLVSSFQEEFMVRTDLMGLAIGSHGSN
IQQARKVQGVTAIDLDEETGTFRIYGETAEAVRKARNYLEFLEDSVQVPRALVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNDNKQPRQETQGMVPFTFVGTKESIGNVQVLLEYHISYL
NEMVELLAEGQQLEEELRQIVDYTQGSSLARFRISNTRHNGCDVDEVEQLRLERMQIDEQ
LRQITQGHRPGDREKGERGERGGGGYNTDNSANASSTSLHGSRSYNGRGRGRRGHGYSTG
YGTNSEQSNASETDSERREELSDWSLAVEDQEREREREKGSRPQRDGRRRPGPGRGRGGP
GGRGRGGRGGYNSSAGPRDHEDNHAYGAAETNTETDQTADTDASESNLPANRRRRSRRRR
TDEDTTLMDGMSESDNASMSENGIDDSEAKPQRRNRSRRRHIRLPEERQPVTVADYISRA
ESQSRQMTTTKDTKKNKDVGQVDAIAEDSPPSAPATTNGSNNDAAVSKGSDATGASAKIS
FKGDSNPQPVVNGLS
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggaggaactggtggtggaggtccgtggctccaacggggcttattacaagggcgttgtc
aaagatatccacgatgactctctcaccattgcctttgagaacaattggcagccagagcgc
caggtgcccttcaatgatgtcaggatgccaccgcccgctgatgccaagaaggagattgga
gagggcgaggaggtggagatcctctctagagccaatgaccaggagccttgtggatggtgg
ctggctaaagtccgcatgatgaagggagctttctatgtgattgagtatgcagcctgcgat
gccacctacaatgagatagtgacctttgagcgtctgcgtccagtcaacactaacaaggcc
atcaccaagaactcctttcacaagtgcactgtccctgttcctcaggatctacaagaagcg
tgccagaatgagaacgcccataaagactttaagaaagccgtgggagcctgtcgcatctca
tactgccccgagaccagccaactactgattgtgtctaccaatgagacgacagtgaagcgt
gtgtctttgctgagtgacatgcacctgcgcagcatcaggaccaagctgctgctaatgtca
cgcaaccatgaggccacaaaacacctggagacctccagacagctggtgtcgtccttccag
gaggagttcatggtgagaacagatctgatgggcctggccatcggcagccatggcagcaac
atccagcaagcacggaaagttcagggtgtcactgccattgacctcgatgaggagactggc
accttcaggatttatggagagacagcggaggcagtaaggaaggccaggaactacctggag
tttttggaggactctgtccaggtgcccagggctctcgttggcaaagtgattggtaagaac
ggtaaggtcatccaggagattgtggataagtccggtgtggtgagggtcaggatcgaagga
gacaacgacaacaagcagccccgacaggaaacacagggaatggtcccattcacctttgtc
ggtactaaggagagtattggcaatgttcaggtcttgctggagtaccacatctcttacctc
aatgagatggtggagcttcttgcggaaggccagcagctagaggaagagctgaggcagatt
gtggattatacacagggaagcagcctagcaagattcagaataagcaacacaaggcacaat
ggatgcgatgtagatgaggttgagcagcttcgtctggagaggatgcagattgatgaacag
ttacgtcagattacccagggtcaccgcccaggtgaccgagagaaaggcgagagaggggaa
agaggaggaggagggtataatacagataacagtgccaatgcctcctctacctctttacat
ggcagtcgctcctacaatggtcgagggcgtgggcgccgaggccacggctacagcactgga
tatggcaccaactccgagcagtccaacgcctctgagacagactcggagcgcagggaggag
ctcagtgactggtctcttgctgtagaggaccaggaaagggagagggagagggagaaaggc
tcacgaccacaaagagatggccgcaggaggcctggacccggcagaggtcgaggagggcct
ggaggacgggggagaggaggaagaggaggatacaacagctctgcagggccccgggaccat
gaggataaccatgcctacggagccgcggagacaaacaccgagacagaccagacagctgat
acagatgctagcgagtccaatttgccggcaaaccgccgcaggagatcgcgacggcgcaga
acagacgaggacaccacactgatggatggcatgagcgagtcagacaacgcctccatgagt
gaaaatggaatagatgactcagaagctaaacctcagcgacgtaaccgtagtcgacgccgc
cacatccgcctgcctgaggagaggcagccagtgaccgtggctgactacatatcccgggct
gaatctcagagcagacagatgacaaccaccaaggacaccaagaaaaacaaggatgtgggt
caggtggatgccattgccgaggacagcccaccgtctgccccggcaaccaccaatggttct
aacaacgatgccgccgtcagtaaaggcagcgatgccaccggagcttccgccaaaatctcc
ttcaaaggggactctaacccgcaacctgttgttaacggactctcctag
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