Perca flavescens (yellow perch): 114561471
Help
Entry
114561471 CDS
T07494
Symbol
cth
Name
(RefSeq) cystathionine gamma-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv00260
Glycine, serine and threonine metabolism
pflv00270
Cysteine and methionine metabolism
pflv00450
Selenocompound metabolism
pflv00670
One carbon pool by folate
pflv01100
Metabolic pathways
pflv01230
Biosynthesis of amino acids
Module
pflv_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
114561471 (cth)
00270 Cysteine and methionine metabolism
114561471 (cth)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
114561471 (cth)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
114561471 (cth)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pflv04147
]
114561471 (cth)
Enzymes [BR:
pflv01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
114561471 (cth)
Exosome [BR:
pflv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
114561471 (cth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
DegT_DnrJ_EryC1
Met_gamma_lyase
Beta_elim_lyase
GDC-P
Motif
Other DBs
NCBI-GeneID:
114561471
NCBI-ProteinID:
XP_028443304
LinkDB
All DBs
Position
9:complement(21107011..21124323)
Genome browser
AA seq
409 aa
AA seq
DB search
MDQNHKQDEQSDLFAGFSSAYKSFATEAIHVGQEPEQWKSMAVVPPISLSTTFKQLGPGN
HAGFEYSRSGNPTRNCLEKAVAALDGAKYCIAVASGLAATVTITHLLKAGDGIVCMDDVY
GGTNRYFQRIAVELGLKVSFVDCTKPELLEAALKANTKLVWIETPTNPTMKVVDIKACSE
VAHKYNKDIVVVVDNTFMSAFFQRPLALGADICMYSATKYMNGHSDVVMGLASMNRDDLY
ERLKFLQNALGCVPSPFDCFLCNRGLKTLHLRMERHFRNAMAAAKFLEADPRVEQVIFPG
LPSHPQHDVMKRQCTGCPGMITFYIKGKLEHASTFLSNLKLFAIAESLGGYESLAEHPAI
MTHASVPENERRVLGISDTLIRLSVGLEDEADIIEDLEQALAAAHPKKK
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaaatcacaaacaagacgagcagagcgacttgttcgccggctttagttcggcg
tataaatcgttcgccacagaggcaattcacgttggccaagagccggagcaatggaaatca
atggctgtagtgccgccgatttccctttctacaacgttcaagcagctcggaccaggaaac
cacgccgggtttgaatacagccggagtggaaaccctacaagaaactgtcttgagaaggca
gtggctgctttggatggagcaaagtattgcattgctgttgcctcgggcctggcagccaca
gtgaccatcactcacttgcttaaggcaggtgatggaatcgtctgcatggatgacgtgtac
ggaggcacaaaccgctacttccaaagaattgccgttgaacttggtctgaaggtgtctttt
gttgactgtacaaaaccagagctgctggaggctgctctgaaggccaacactaaactggtg
tggattgagacacccaccaaccccacaatgaaggttgttgacatcaaggcctgttctgag
gtggcccataaatacaacaaagacatagtggtggtcgtggacaataccttcatgtctgcc
ttctttcagcgccccttggctttgggagctgatatctgcatgtattcagctaccaaatac
atgaacggtcacagtgatgtggtaatgggtctggcctcaatgaaccgggatgatctgtat
gagcgactgaagtttctgcaaaatgcactgggttgtgtaccatctcccttcgactgcttc
ctgtgtaaccgaggactgaagaccctacacctgcgaatggagcggcactttaggaatgcc
atggctgccgccaagtttctggaggcagatcccagggtggagcaggtcatcttcccaggc
ctgccctctcacccccagcatgacgtgatgaagagacaatgcaccggatgtccggggatg
attaccttctacattaagggaaaactggagcatgccagcaccttcctcagtaacctcaaa
ttgtttgcgatagctgagagccttggtggttatgaaagtttagcagaacatccggcaatt
atgacccatgcatcagtgccagaaaacgagaggagagtcctggggatcagtgacacactc
atccgactctccgtgggcctggaagatgaggctgacatcatcgaagaccttgagcaagct
cttgctgctgctcatccaaagaagaagtga
DBGET
integrated database retrieval system