Perca flavescens (yellow perch): 114561532
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Entry
114561532 CDS
T07494
Symbol
atg4b
Name
(RefSeq) cysteine protease ATG4B isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04136
Autophagy - other
pflv04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114561532 (atg4b)
04136 Autophagy - other
114561532 (atg4b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pflv01002
]
114561532 (atg4b)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflv04131
]
114561532 (atg4b)
03029 Mitochondrial biogenesis [BR:
pflv03029
]
114561532 (atg4b)
Peptidases and inhibitors [BR:
pflv01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
114561532 (atg4b)
Membrane trafficking [BR:
pflv04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
114561532 (atg4b)
Mitochondrial biogenesis [BR:
pflv03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
114561532 (atg4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Dysbindin
Motif
Other DBs
NCBI-GeneID:
114561532
NCBI-ProteinID:
XP_028443389
LinkDB
All DBs
Position
9:11789524..11799648
Genome browser
AA seq
396 aa
AA seq
DB search
MDAATLTYDTLRFGEFEDFPETSEPVWILGKEYNALTERDEILSDVTSRLWFTYRKNFPP
IGGTGPTSDTGWGCMLRCGQMILGEALVCRHVGRDWRWARGQKQREEYISILNAFIDKKD
SYYSIHQIAQMGVGEGKPIGQWYGPNTVAQVLKKLAVFDTWSRLVVHVAMDNTVVIEEIK
RLCMPWLDAAGACGGEGELNGCLEGACALAEEETALWKPLVLLIPLRLGLSDINEAYIET
LKQCFMLPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVDPCEDGQVPDETYHCQ
HPPCRMHICELDPSIAAGFFCRTEDEFDDWCMRVRRLSCNRGGLPMFELVDSQPSHMVSV
DALNLTPDPYFADFSDSDRLERFFDSEDEEFEILSL
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagcaaccttgacatacgacacacttcgctttggagagtttgaagacttccct
gagacctcagagcctgtgtggatcttggggaaagaatacaatgcactcacagagagagat
gagattttatcagatgtcacttcacgactgtggttcacatacagaaaaaactttccacca
attggtgggacaggaccaacatcagatacaggatggggatgcatgttacggtgcggccag
atgatcctaggcgaggccttggtgtgtagacatgtaggcagagactggagatgggccaga
ggccagaaacaaagagaagagtacatcagcattctcaacgccttcattgacaaaaaagac
agctattattccatccatcaaattgcccaaatgggagttggagagggaaagcctataggc
cagtggtatggaccgaacacagttgcccaggttttaaagaagctggcagtgtttgacacg
tggagcagattagtcgtacacgtggcgatggacaacactgtggtcatcgaggagatcaag
cgtctctgtatgccctggctggacgctgcaggagcctgtggcggagagggcgagctcaac
ggctgcctggagggggcgtgtgccctggccgaggaggagacggctctctggaaacctctg
gtcctgctcatccccctcaggctgggcctgagtgatataaatgaggcctacatcgaaacc
ctcaagcaatgcttcatgctgcctcagtccctgggtgttattggggggaaacccaacagt
gcccattacttcattggttatgtcggagaggaactcatctatttagacccacacaccacg
cagcctgcagtggatccatgtgaagatggccaggtccctgatgagacgtaccattgtcag
cacccaccctgccgcatgcacatctgtgaattggacccatccatcgcagcgggtttcttc
tgcagaacagaggacgagtttgacgactggtgtatgcgcgtaagaaggctgtcgtgcaac
agagggggcctgcccatgtttgaactagtagacagtcagccctcacacatggtcagcgtg
gatgcccttaaccttactcctgacccttactttgcagatttctcagactcggacaggttg
gagcggttctttgattcggaagatgaagagtttgagatcctttccctctga
DBGET
integrated database retrieval system
