Perca flavescens (yellow perch): 114561713
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Entry
114561713 CDS
T07494
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03030
DNA replication
pflv03410
Base excision repair
pflv03420
Nucleotide excision repair
pflv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114561713 (rfc4)
03410 Base excision repair
114561713 (rfc4)
03420 Nucleotide excision repair
114561713 (rfc4)
03430 Mismatch repair
114561713 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pflv03032
]
114561713 (rfc4)
03036 Chromosome and associated proteins [BR:
pflv03036
]
114561713 (rfc4)
03400 DNA repair and recombination proteins [BR:
pflv03400
]
114561713 (rfc4)
DNA replication proteins [BR:
pflv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
114561713 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
114561713 (rfc4)
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
114561713 (rfc4)
DNA repair and recombination proteins [BR:
pflv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
114561713 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
114561713 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_assoc_2
AAA_16
AAA_22
AAA_11
AAA_30
DUF815
AAA_24
Mg_chelatase
SLFN-g3_helicase
Gp44_lid
AAA_14
AAA_19
RuvB_N
AAA_5
KH_DUF2096_C
DNAX_ATPase_lid
ResIII
Kinesin
Cdc6_lid
AAA_7
AAA_3
AAA_28
Motif
Other DBs
NCBI-GeneID:
114561713
NCBI-ProteinID:
XP_028443587
LinkDB
All DBs
Position
9:9413481..9458808
Genome browser
AA seq
409 aa
AA seq
DB search
MGKVFLGQRGAVPPLAAKPMVTLRHGAVPGGLNRLEPTRHPEHLIGSHGGVMQAFLKGAT
VQTTRSQKDKAAAGLSTEKKAKAIPWVEKYRPKCVDEVAFQDEVVAVLKKSLEGADLPNL
LFYGPPGTGKTSTILAAARELYGPQLYRQRVLELNASDERGIQVVREKVKNFAQLTVAGT
RPDGKLCPPFKIIILDEADSMTAPAQAALRRTMEKESRTTRFCLICNYISRIIEPLTSRC
SKFRFKPLANQIQEERLLEICEKENLKYTKESIAELVRVSEGDLRKAITFLQSAARLNVD
KEITERAVLEIAGVVPPKMIDHLLQICFTGTFEKLEVAVRNMVDEGYAATQILSQLHESI
IEQDLSDKQKSAITEKMAVVSKCLSDGADEYLQMLSLCSVIMQHASQNN
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagtctttctgggccaaaggggtgcagttccaccgttggccgctaagcccatg
gttactttaagacatggcgctgttcctgggggcttgaaccggcttgaaccaactcggcat
ccagagcatctgatcggaagccacggtggagtcatgcaggcctttttgaaaggagcaact
gttcagactaccagatctcagaaagacaaggcagcagcagggctaagtacagagaagaaa
gccaaggctattccttgggtagaaaaatacaggccaaagtgtgttgatgaggtggccttt
caggacgaggtagtagcagtgctgaagaagtctctggaaggagctgatcttcccaacctg
ctcttctatggccctcctggaacagggaagacctcaactatcttagctgctgccagagaa
ctttatggtccacaactgtacagacagagggtgttggagctcaatgcctctgatgaacga
ggcatccaggttgtccgagagaaggtcaagaactttgctcagctcaccgtggccgggact
cgtccagatgggaagctttgtcctccttttaagatcatcatcctggatgaggcggactcc
atgactgcaccggctcaggccgctctaaggcggaccatggagaaggagtctcgtaccacc
cgtttctgcctcatctgtaattacatcagcagaattattgagcctctgacctccagatgt
tccaagtttcgcttcaaacctctagccaatcagatccaagaagagcgcctgctggagatc
tgtgagaaggagaacctcaagtacaccaaagagagtattgcagaattggtgagggtgtct
gagggagacttgcggaaagccataaccttcctccagagtgctgcgcgtctcaacgtcgac
aaggagatcacagagcgagctgtccttgaaatagctggggtcgtccctcccaaaatgatt
gaccacttgctccagatatgcttcacaggaacatttgagaagctagaggttgctgtcagg
aacatggtggatgaaggctatgcagccacacagatcctgagtcagctccatgagtctatc
atagagcaggacctgagtgacaagcagaagtcggccattacagagaagatggcggttgtc
agtaagtgcctgtcagatggtgcagatgagtacttgcagatgttgagtctgtgttcagtc
atcatgcagcatgcctcccagaacaactaa
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