Perca flavescens (yellow perch): 114561903
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Entry
114561903 CDS
T07494
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114561903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pflv03021
]
114561903
03036 Chromosome and associated proteins [BR:
pflv03036
]
114561903
Transcription machinery [BR:
pflv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
114561903
Coactivators
SAGA/TFTC/STAGA complex
114561903
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
114561903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
DUF3106
Motif
Other DBs
NCBI-GeneID:
114561903
NCBI-ProteinID:
XP_028443860
LinkDB
All DBs
Position
9:complement(5839169..5861582)
Genome browser
AA seq
728 aa
AA seq
DB search
MQQLVQDEFRHHAAAKSSTTEIIMATNKVVIEAPKLESSGAAGAGDTSNKVQILQVPAKC
GPIAAVQSPATAAGGSKGDCVSAPPPKVLPTGHGPQSPSCTVAVRQTSSPSVMVVSKVVT
PGRVTATSQPQITKAALSQVAPMNQTPTPGRTVVITVPRAAGAQTVTVAPRLPHAASPQL
PANIQIPAGMMLIRSDSGQLMLVSQQALAQAQQGLRGVGGQGPRILVPQGSAASGNKSNE
KVTVIRMAAPPSFQPAPVQKTAVVKVIGVAHKPAVVPPLSATSEQGSQHRIQAVVTETKK
EPATAISQATLESVKKCKNFLVTLIKLASSDSRSANMANNVRGLVRSLLEGKLEAEEFTE
QLYRELKSTPQPCLVPFLKKSLPAVRRLTSDPQLFIQQASARNLNTPSSTVKQSSADTGQ
NLNTNQQVSYQQPRGVTVRATSAHSTNYTYKSSRPPPKPTVVPSGTHFTGTFSMKQPFTQ
EPPRSTKFAFSSGSYREDDDINDVASMAGVNLREENAQILTSVVGSVVQSCHDQPFLSPN
PVLSRILRTGQALGVTDVAPEVVALVSHATQECLRGLLEKLSVMAEHRKPTLKEDPWHAK
VSDVRSQLRFLEEVESLKKKRKDEEERESLLRLARSRSHTEDPQQQQLKQRAKEFQQIEA
AQLQQREANLTALAAIGPRKKRPLEQSGSQVSLLPRQRVTRVMLRDLLLCMEQDHFLSHS
LTLYKAML
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaactggtccaggatgagttcaggcaccacgctgccgcaaaatcatcgacaaca
gaaataattatggccacaaataaagtggttattgaagccccaaagctggagtccagcggg
gcagcaggggctggagacacctctaataaagtccagatattgcaggtcccagccaaatgt
ggacccatcgctgccgtgcaatccccagccactgctgcaggaggttcaaagggtgactgt
gtctctgcccccccacctaaagtcctccccactggccatggcccccaatctccctcctgt
acagttgcagtgcgtcagacttcctccccttctgtcatggtggtatcaaaggtggtcacc
ccaggacgagtgaccgctacaagccaaccacagataacaaaagcagctttgagccaggtg
gcccccatgaaccagacccccaccccaggacggacagtggtgataactgtacccagggca
gcaggtgcacagacagtcactgtggcccctcggctgccccatgctgcttccccacagctc
ccagccaatatccaaataccagcaggtatgatgttgatccgcagcgacagtggtcagctg
atgctggtatcccagcaggctttggcacaggctcagcagggactgagaggcgttggtggt
caagggcctagaatactggtcccgcagggatctgcagcatctgggaataaaagtaacgag
aaggtgacagtgatcaggatggcagcccctcccagtttccagcctgcaccagtccagaag
accgctgtggtaaaggtgattggtgtggctcacaaaccagctgtagtcccgcccctcagt
gctacgtctgaacaggggagccagcatcgcattcaggcggtcgtcacggaaaccaaaaag
gaacccgcaaccgcgattagtcaggcgaccctggaaagtgtgaagaagtgcaagaacttc
ctggtgactctgatcaagctggcctccagtgactccaggtccgccaacatggccaacaac
gtccgaggactggtccggagtctgctggaagggaagctagaagcggaggagttcacagaa
cagctgtatcgtgagttgaagtcaactccacagccctgcttggtgcctttcctcaagaaa
agtcttcctgcagtgcgccgccttacttcagacccccagttatttatccaacaggcttca
gcccgcaacctcaacactccgtcttccaccgtgaagcagtccagcgctgacacaggacaa
aacctcaataccaaccagcaggttagctaccagcagcctcgaggagtgactgtgagagcg
acatcagcccactcaacaaactacacgtataagagcagcagacccccacccaaacccaca
gtggtcccgtcaggaacacacttcaccggaactttttcaatgaaacagccttttactcag
gagccaccgcgttctaccaaatttgcattcagttcaggatcttacagagaagatgatgac
attaacgatgtcgcctccatggctggagtcaacctgagggaggagaatgcccagatcttg
accagcgtggttggctctgtggtgcagtcatgtcacgaccagcccttcctctcccctaac
ccggtgctcagccgaatcctccgtacaggacaggcattgggagtaaccgatgtcgctcca
gaggtggtagctctggtttctcatgccacgcaggagtgtctccgtgggctgctggagaag
ctcagtgtgatggcagaacaccgcaagccaaccctgaaggaggacccgtggcatgccaaa
gtgagtgatgtacgctcccagcttcgcttcctggaggaagtggagagtttgaaaaagaag
aggaaagatgaagaggagagagagagtctgctgcgtctggccagaagtcgctcccacact
gaggatccgcagcagcagcagctcaagcaaagagccaaagagttccaacaaatagaagca
gctcagctgcagcagagagaggccaacctcacggctctggctgccatcgggcctcgcaag
aagagacccctggagcagagtggaagccaggtgagtctgctgcccagacagagagtgact
cgggtcatgctgagggatctgctgctgtgtatggagcaagaccacttcctgtcccactct
ctcactctttacaaagccatgctctga
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