Perca flavescens (yellow perch): 114562031
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Entry
114562031 CDS
T07494
Symbol
polrmt
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pflv03029
]
114562031 (polrmt)
Enzymes [BR:
pflv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
114562031 (polrmt)
Mitochondrial biogenesis [BR:
pflv03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
114562031 (polrmt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
PPR_2
Motif
Other DBs
NCBI-GeneID:
114562031
NCBI-ProteinID:
XP_028444062
LinkDB
All DBs
Position
9:complement(13740331..13802811)
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AA seq
1339 aa
AA seq
DB search
MSLLRVCAFAKCLNRRSLFGECAVRVSLADRCQLCLCASIRGGAVRRISETPLLCQRRNV
SFVIPKREDAKKRVLEQSQLLDVLEARIQQLQSDIFLDVQHAKVQFVKNPSSGRGVLPAK
SPRSTPKEKSSISKSGKTVAKGASESHPSRWMEKLTQEKNNKLTKQQHLHQKIQKNVKEK
PTAKSKGSKSSSVLPGTSHKTISTTKKTTVPLIKNRKGRMKLSDEIRAAVSSPVASSSAA
AGTAAMAHKVSKGKQKGSKNPVPGKEGQKQTVADPQGMVKELAEVEELERRLSQQVSQWT
SSSNPERLQEYSEGAACGDIQLSIRSYLEACVFAGDVERAHRFLLSQHRVMSRRKHLNTG
VYNIIMRVWAKKGILNQIGRMFILLEEAGLKPNLGSYCTALECMGRNPNCSPKVIIRCLS
QMEEDGLSVDDLFSQCVFRQDERDMVLKAVHIVQPDYQPSLNTNANQCSSSLVKDFYTQK
SDHQYPKLDFTQEELQERFKRQLRIEQACTITIDSVEAAKPVTENMAKMRELLADQRAQW
QKILLQALRESKMILANTNTKDYRLNLYPYLCVLEDREYVDIMIQSVASLPPSGESLKIL
ASDLGNRVYTKYSVRQKHQNQMVEKLGNIYNGYTELLAKDTKEYDILPREHWCKLETDQS
TGPTLQGGETHWPYIVTLELGTYMVDMMVKNLKINSDILNPAFDRKLIPILYHMYTFRST
RQVGFIKPHPILTQMQQEAMETKLTFDSYVMPMQCPPVPWTSVKFGAYLLTPTKLMRTVE
GATQHDVLLEKCQDLHAVLDSLNQLGNCAWRINKPLLDIIISIFNDRGSDKLDIPPPLSE
APKIPHFNAQDPTYTASEKAHMKREVINAKKKCSEMHSLRMDALYKLSIANHMRDEIFWF
PHNMDFRGRTYPCPPYFNHLGSDVTRAVLVFAEGKPLGPKGLDWLKIHLVNLTGLKKRSS
LDGRLEYANTIMEDVLDSADNPLNGKKWWMNADEPWQALSCCMELANAVRSPDPTQFISH
FPVHQDGSCNGLQHYAALGRDVIGATSVNLMPCDVPQDVYSGVAQQVEEFRVRDAKSGLK
IAQVLEGFISRKVVKQTVMTVVYGVTRYGGRLQIEKRLKEIEEFPKEHVWDASHYLVRMV
FSGLKEMFTGTREIQDWLTESARLISKSGHTVEWVTPLGLPIIQPYHRTRNQVLKSTMQH
INLQISHDTKERPDTVKQKNAFPPNFIHSLDSTHMMLTALHCYSAGLTFVSVHDCFWTHA
LTVDTMNKVCREQFVALHSQPILQELSNFLLLKYCAGLPTEAKNKKYQEYRRLLLLLAKV
PKTGDFDLQRVKESTYFFS
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttctcagagtgtgtgcctttgctaaatgtctgaaccgtcgcagtttatttgga
gagtgtgctgttcgcgtgtcccttgctgaccgctgtcagctgtgtctgtgtgcgtcgata
agaggcggcgcagtcagacgtatatcagagacaccattgctgtgtcaaagaagaaatgtt
tcatttgtaatcccaaagagagaagatgcaaagaaacgtgtactggaacagtctcagttg
ttagacgtgcttgaggccaggatccagcaactccaatccgacatctttttagatgtccag
catgcaaaggtgcaatttgttaaaaacccctcttctggaagaggggttttacctgctaag
agtcccagaagcacacctaaggagaaaagtagcatttctaaatcaggaaagactgttgct
aaaggagcttctgaatctcatcccagccgctggatggaaaaattaactcaggagaagaac
aacaaactcacaaaacagcagcacctccatcagaaaatccagaagaatgtgaaggagaaa
cctacagccaaatctaaaggtagcaaaagcagctcagttctccccggtacatcacataaa
actatatctaccacaaaaaaaacgactgtgcccttgataaagaaccgaaaaggacgcatg
aaattgtccgatgagattcgtgctgcagtttcttcaccagttgcctcctcctccgcagca
gcaggaacagcagctatggcacataaagtatccaaagggaaacagaagggctctaaaaat
ccggttcccggtaaagagggccaaaagcagaccgttgcagatccccaaggcatggtcaaa
gagctggccgaggtggaggagctggagaggaggctcagtcaacaagtaagccagtggaca
tcttcaagtaacccggagcgcctacaggagtacagtgagggagccgcatgtggggacatc
cagctgagtatccgctcttacctggaggcgtgtgtgtttgccggggacgtcgagagggcg
caccgtttcctgctcagccagcacagagttatgagtcgacgtaaacatctgaacacaggc
gtctacaacataataatgagggtgtgggccaagaaaggcatattaaatcagatcggccgc
atgtttattctgttagaagaggctggtctgaagccaaatctgggatcctactgtactgcc
ctggagtgtatgggccgcaatcccaactgctccccaaaggtcatcataaggtgcctaagc
cagatggaggaagatggcctgtctgtggacgacctgttcagccagtgtgtgttccggcaa
gatgagagggacatggtgctaaaggcggtgcacattgtccagcccgactaccagcccagc
ctcaacacaaacgcaaaccagtgctcctcgtcgctagttaaggacttctacacacagaag
tcagaccaccagtaccccaaactggacttcactcaggaggagcttcaggagcgtttcaaa
cgtcagctccgcattgaacaggcctgcaccatcaccatcgactctgtggaggctgccaag
cccgtcactgaaaacatggccaaaatgagggagctgctggcggatcagcgggcacagtgg
cagaagatcctcctccaggccctgagggagagtaagatgatcctggccaacaccaacacc
aaggactacaggcttaacctttatccctacctctgtgtgctggaggatagggagtatgtt
gacatcatgatacagagtgttgccagcctgcctcccagtggagagtcattgaagatttta
gccagtgatctgggcaacagggtctacacaaagtactcggtgcggcagaagcaccagaat
cagatggtggaaaagttggggaacatttacaacggttacacagagctgctggccaaagat
acaaaggagtatgacatccttcccagggagcattggtgtaagctggagactgaccagagt
acggggcccacgctgcaaggaggagagacccactggccatacatagtaaccctggagctg
ggcacctacatggtggatatgatggtcaagaacctcaaaattaacagcgacatcctgaac
ccggctttcgacaggaagctcatccccatcctctaccacatgtacacctttcgtagcacg
cggcaggtcggcttcatcaaaccccaccccatcctgactcagatgcagcaggaggccatg
gagaccaagttgacctttgactcctatgtgatgccaatgcagtgccctcctgtgccctgg
acgtccgtcaagtttggagcctacctgttgactccgaccaagctgatgcgcacagtggaa
ggggccacacaacacgatgtgttgttggagaaatgccaggacctccatgctgtcctggac
tctctcaaccagctgggcaactgtgcctggagaatcaacaaacccttgttggatattatt
atctctatcttcaatgatcggggtagtgataagctagacatccctcctcctctgtcagag
gcccccaaaatacctcacttcaacgcccaagatcccacttataccgcttctgagaaagcc
cacatgaagcgggaggtgattaatgccaaaaagaaatgcagtgagatgcacagcctgcgt
atggacgctctgtataaactctccatcgccaaccacatgcgggatgagatcttctggttc
cctcacaacatggacttccggggacgtacctacccctgtcctccgtactttaatcaccta
ggaagtgatgtcacacgggctgtgcttgtgtttgcagaggggaagcccctcggtccgaag
ggactggactggctaaagatccacttagtcaatctgacaggactgaagaagaggagctca
ctagacggacgcctggagtacgccaacactatcatggaggacgtactggactctgcggac
aaccctctcaatggtaagaagtggtggatgaatgccgatgagccttggcaggctctgtcc
tgctgcatggagctagccaacgctgtgagatctcccgatccaacacagttcatctctcac
tttcctgttcaccaggacggctcctgtaatggtctccaacactacgctgctctaggcaga
gatgtgattggtgccacatcggtcaacctcatgccctgtgacgtgccccaggatgtgtac
agcggagtagcacagcaggtggaggagttccgagtgcgggatgcaaagagcggtttgaag
attgcccaggtcctggagggcttcatcagcaggaaggtggtcaaacagaccgtaatgact
gtggtgtacggggtcacgcgctacgggggacgcctccagatagagaaaagactgaaggag
attgaggaattccccaaggagcatgtatgggatgcatctcattacctggtgcgtatggtg
ttcagtggcttaaaggagatgttcacagggaccagagagatccaggattggctgacagag
agcgccaggctcatctccaagtctggccacactgtggagtgggtgacacccctgggttta
cccatcattcagccctaccaccgcacacgcaaccaagtgctgaagagtaccatgcaacat
atcaacctccagatcagccatgacaccaaagagaggccggacacagttaaacagaagaac
gccttcccgccaaacttcatccactctctggactccacacacatgatgctgactgctctc
cactgctatagtgccggcctgacgttcgtctccgttcacgactgtttctggacccacgcc
ctcactgtggacaccatgaacaaggtctgtcgggaacagtttgtcgccctgcacagccag
ccaatccttcaagagctgtccaacttcctgctactgaaatactgcgccgggctcccgact
gaggctaagaacaagaagtaccaggagtacaggaggctgttgctgctgctggccaaagtg
cccaagacaggtgattttgatctccagcgggtgaaagaatccacttatttcttcagctga
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