Perca flavescens (yellow perch): 114562141
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Entry
114562141 CDS
T07494
Symbol
ddx10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pflv03009
]
114562141 (ddx10)
Enzymes [BR:
pflv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114562141 (ddx10)
Ribosome biogenesis [BR:
pflv03009
]
Eukaryotic type
90S particles
Helicases
114562141 (ddx10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
SecA_DEAD
PAS_11
Motif
Other DBs
NCBI-GeneID:
114562141
NCBI-ProteinID:
XP_028444231
LinkDB
All DBs
Position
9:complement(5883721..5889320)
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AA seq
851 aa
AA seq
DB search
MEKKGTNPVGKKRKPVKMKDGTDPVKNFEKWKKKYNKTKAQVKRERPQKKPEWQVEREYI
DRLVSRYGDINSSEAVKFSDFPISKKTLLGLQGAQYRQPTEIQRQTIGFALLGKDVLGAA
KTGSGKTLAFLIPVLECLYRQQWTSMDGLGALIISPTRELAYQTFEVLRKVGKNHEFSAG
LIIGGKDLKSESEKIHRTNIVICTPGRLLQHMDETAAFHASDLHMLVLDEADRILDMGFA
DTLNAIVENLPKSRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKFSTPATLEQSYV
VCELHQKVNMLYSFIRSHLKKKIIVFFACCKEVQYLFRVMCRLRPGMPILALHGKQQQMK
RVEVYNDFLRKQNAVLFATDIAARGLDFPAVNWVLQFDCPEDADTYIHRVGRTARYKEGG
EALLLLLPSEEKGMVGQLQEKKVPITKIQVNPDKLQSVQQKLQAFLAQEKEQKERAQRCF
VSYLRSVYLMKNKEVFDVFKLQIQEYAASLGLAVAPRVRFLSKAQAQRAEKDGQREEEEQ
QSEEEEELRSFKARLKGNVPPEESPSSESEDSGSDEESGDEAEVDRARSRLLGADEDDED
EDDLRDLDLLTVKRKDVFSLTAGEESAEEPAEDSRKKSEKETKFTEAKKALKRNFQVNTK
VAFSEEGEAVQLWPPVQRAAAAHDEEEEEEGVSGINMEKARERLQREDQEFDKHEYSRKV
KAKHREKRLKAKAARREASKQHGRKSDSEEEEEEDEVVAYLANHSEDEFDPSSLPDPDKV
HSEEEEEEAEITAAKRQHSSSSDSSDEDEKQLPVGKRKRVRQQNDAPAALDTGLSLAEDE
ELVLHLLGGRS
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaaaggcacaaaccctgtcgggaagaagcgtaaacccgtaaagatgaaggac
ggcaccgaccccgtcaaaaacttcgagaaatggaagaaaaaatacaacaagacgaaagca
caggtgaagagagagcgaccgcagaagaagcccgagtggcaggtcgaacgggagtacatc
gacagactcgtcagcaggtatggtgacatcaactccagcgaggccgtcaagttctcagac
ttccccatttcaaagaaaaccttgttaggtttgcagggggctcagtacagacagcccacg
gagatccagagacagactatcggcttcgctttgctcggtaaagatgtcctcggcgcggct
aagactggctccgggaagacgttagccttcctcatcccggtgctggagtgcctgtatcgc
cagcagtggacctccatggacggccttggcgctctcatcatatcccccaccagagagctc
gcctaccagaccttcgaagtcctccgcaaggtgggcaagaaccacgagttctccgcgggg
ctcatcatcggcgggaaggacctcaagagcgagtcggagaagatccaccgcaccaacatc
gtcatctgcacgccgggccggctgctccagcacatggacgagacggccgccttccacgcc
tccgacctccacatgctggtcctggacgaggcggaccgcatcctggacatgggcttcgcc
gacacgctcaacgccattgtggagaacctgcccaagtcgcggcagacgctgctgttctcc
gccacgcagaccaagtcggtcaaagacctggcccggctcagcctcaaagacccggagtac
gtgtgggttcacgagaaggccaagttcagcacgccggccaccctggagcagagctacgtg
gtgtgtgagctccaccagaaggtcaacatgctgtactcgttcatcaggagccacctgaag
aagaagatcatagtcttcttcgcttgctgcaaggaggtgcagtacctgttccgggttatg
tgccgcctccgaccgggcatgcccatcctggctctgcatggcaagcagcagcagatgaag
agagtggaggtctacaatgacttcctcagaaagcagaacgctgtgctctttgccaccgac
atagccgccagaggcctggacttccccgccgtcaactgggtgctgcagtttgactgtccg
gaggacgcggacacctacatccacagggtgggccggacggcccggtacaaggagggggga
gaggccttactgctgctgcttccctcggaggagaagggcatggtcggccagctgcaagag
aagaaagttccaatcacgaagatccaggtgaacccagacaaactgcagagcgttcagcag
aagctgcaggccttcctggcccaggagaaggagcagaaggagagagcccagcgctgtttt
gtctcctacctgcgctccgtctacctgatgaagaacaaagaggtgtttgacgtcttcaaa
ctccagattcaggagtacgcggcctccctgggcctcgccgtggcaccaagggtgcgcttc
ctcagcaaagcccaggcacagagggctgagaaagatggccagagagaggaggaggagcag
cagtctgaagaagaggaagagctgaggagctttaaggcccggctgaaaggaaacgttccc
cccgaggaaagtccgagctccgagtcggaagattcgggcagcgatgaggaaagcggtgac
gaagcggaggtggatcgagccaggagccgtctcctgggtgcagatgaggacgacgaggat
gaggacgatctgagagacttggacctgctgacggtcaaaagaaaggacgtcttcagtctg
acggcgggcgaggagagtgccgaagaacccgccgaggactccagaaagaaatcggagaag
gagacaaagttcacggaggccaaaaaggccctcaagaggaacttccaggtcaacaccaaa
gtggctttcagcgaagaaggcgaggccgtgcagctgtggcctccggtccagcgggcagcg
gcggctcacgacgaggaggaagaagaggagggggtttcgggcatcaacatggagaaggcc
cgggagaggctgcagcgcgaggaccaggagtttgacaagcacgagtacagccgcaaggtg
aaagccaagcaccgggagaagaggctgaaggcgaaggcggccaggagggaggccagcaag
caacatggccgcaagtccgactcggaggaggaggaggaggaggacgaggtggtggcgtac
ctggccaatcacagcgaagatgagttcgaccccagcagcctgccggaccctgacaaagtg
cactctgaggaggaggaggaggaggcggagataacggcagccaaacggcagcacagcagc
agcagcgacagcagcgacgaggatgagaagcagctcccggtggggaagaggaagagagtg
aggcaacagaacgatgcgcccgcagccctggacaccggtctctccctggccgaagacgag
gagctggtcttacatctgctaggggggcgcagttag
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