Perca flavescens (yellow perch): 114562207
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Entry
114562207 CDS
T07494
Name
(RefSeq) FRAS1-related extracellular matrix protein 1-like
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114562207
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pflv04091
]
114562207
Lectins [BR:
pflv04091
]
C-Type lectins
Lecticans
114562207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Calx-beta
Big_9
Motif
Other DBs
NCBI-GeneID:
114562207
NCBI-ProteinID:
XP_028444343
LinkDB
All DBs
Position
9:complement(36545088..36698375)
Genome browser
AA seq
2158 aa
AA seq
DB search
MAAVSAVLLLLLAGACSGSLVVVNSGVEVTRGRSVFVTEKELKISVDATADCKVEVVMNE
PVTQRVGRLTPQVFDCSFLEDEVKYVHDGSPLLDEDAVMLRVYRFRSRDTLVETLVLPVR
VVDSVSGVVRLGSAPLVVPEFYGLSNAIDGSVLDIRAAPELVCSVRLMTGDIIVPALGQL
VREEDAMQRKGRETAALCPGNRPCLHSTREVRFLKTSCQDFLSSGLKYQHLQPPSPEIDY
IPLRVELRQRGSRALLHSESVWLPVLIHGALPNQPPAASFMTSLILEVDQFILTPVTTAT
LDATDAETPREELVFNVTVPPAAGYITHLDDHAKPVSSFTWRDLHGMKVAYQPPSSSQSQ
RSNYQVEFQAIDGSYMTSPPISVHISIRAAETNAPRVSWNMGLDLLEGQSRPITWEELQI
VDNDNINAVYLVAVDGPLHGRLTVRGGKAFMFRVQDLRDGVVVYHHSDSDTTRDHIVFRI
SDGRHSIRHKFPVNILPKDDSPPFLINNVALEVQEGTAVRLEDFTLLAADLDSSDDYILY
QLTSGPRAGQLVRKTSAHETGEQVDSFLQRDLIQGQIYYQHSGEEQFEDSFDFTLSDSHQ
PPNLSQTYTVVVHVFPVKDQLPVEVSGSVRSLTVKETEVVYITQSHLHFTDTEHPDTDLT
YVITEPCFSPLHPGLMDAGRLFYTDSTNAMKRDHTVPVLKSFTQHAVNHLKVAFMPPVED
IGPEPLGVRFVFSVSDNHGGTVSGLLFNISVTPVDDQAPQAFTNLLRVEEGGAALVTEEH
LLVRDRDSPEEALGAELQRTARHGRLELQGRTLLLGDAFTLQDLRGLRLRYIHDDSETTE
DEVHLKVTDGLNAADVVLAIQVLPMNDEPPQLDGGLRGELSCEEGGQVQVTVDYLSATDR
DSEDSRLTYMLARSPGRGAVQRAGLTVDKFSQQDLLQGHVYYVHTGGEIGAEPVFDTVTL
IISDGEAGGTDGCCHGDASPPPVPLHGTLPVYDLNITILPVNDKVPTVTLGESLLVVDEG
SWACLCGGVLGASDPDSPPDQLTFHLETPPLHGFLENTLPAPGSEKSSAGVPLESFSLIH
LTSGFINYVQSESKGAEPTVDQLSVSVSDGLHRSAPIPFYIIINPTNDEAPTMLLANFTV
KEGGLRELTPSVLNGFDLDAPPDVLTFTLVRPPAHGRLINGVYGTETSRYTEMGAELLQR
SLSVTSFTLQELRQGLKIVYMHDDTETLKDSVALLLTDGVHTVQGTAQVTVLPVNDQKPR
LLKNAGLEVDSGQRRVISSVALHAEDLDSPADQLFYFLNAAPRFGKLQLKTGSGWTELSP
GQNFTQDAVEMNCVWYAHTATDGFKGHDSFRFTLSDLDNETPAQSFFISVHTVQKGDLLL
RTETVRLAEGRRVVLTTDVLLARDASGRPEELLYAVSVPPRHGLVHAVRRPGVPLSSFTQ
LDVAAHRVCYTHDNSRHAEADAFSFVVTNGDSSRSGVLRFAIEHGDRIPPTLHHNAGLRL
QDGATKTVTGAELQLTDPDTAAANLSFVVTQPPRHGRLLLGGVPLTPPLAFTQADVDEMK
LAYRHDRASPADIDRFYFLPTDGNNRGYLEFGQLRDEPAVFNIQVDRVDRTPPSLTTRRS
PSTVVDLGAGRYGILITSKHLQAFDPDSPAEQLEFSISRPPNFGYLENALTGAYIKGRFT
QRDVDQRAVVFVLPADMEVTADSFQFRLTDPAGNTMLPEILELSWSRVELSATCYRTCET
SGTLQIQIQRSGKSVDPAYVAIQVEEGSAKLGRDFTHSTAGLIQFDPGVSMKTWNIYLID
DGLEENHETFTVTLKKPQNAVLGQRTSASVEIIDPRGGRCDPDDLRVDDDSKRLPPLPLP
LPRLPDTPRPEEDPVTDIEAELLWENQPHPPRGDVPNRRPYLDYGEGEPQDQPAPGSSSH
VFHHSRQPLGGATGSTGSTGSTGSTGHSVRNGGLKVHLSGERRSEEKVWTFHSLTPLRVE
ELRPSDAGWSLLQDPPQMDHPEPRRHPDLRQRKTGKSVSSSCPDGWTHYRRRCYIVGSSV
ASWGSAERSCSLLFNSSLTGVRSRRDLAWLWKFAGRKPFWIGLSGGSGRWIWADGGSVSF
SRLRGAPPGHGESHGKSHGESHGDSDCVLVENPRSWISTSCSPETQHTFICSSVAHTH
NT seq
6477 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgtcagcgcggtgttgctgctgctgctggcgggcgcctgcagcggtagtctg
gtcgtggtgaactcgggcgtggaggtgacgaggggccggtctgtgttcgtcacggagaag
gagctgaagatcagcgtggatgcgaccgcagactgtaaggtggaggtggtgatgaacgaa
cctgtcacccagcgagtcgggaggctgactccgcaggtgtttgactgcagcttcctggag
gacgaagtgaaatacgtccacgacggaagtcctctgctggacgaggacgcggtcatgcta
agagtctacaggttcaggtcccgggacacgcttgtggagacgctggtcctgccggtgcgg
gtggtggactcggtctccggcgtggtgcggctcggcagcgcgccgctggtggtgcccgag
ttctacggtttatccaacgccatcgacggctcggtgctggacatccgggccgcgccggag
ctggtctgcagcgtgcggctgatgaccggtgacattatcgtccccgcgctgggacagctg
gtgagggaggaggacgccatgcagaggaaaggccgagagacggcagcgctgtgtcccggg
aacagaccgtgtctccacagcaccagggaggtgcgtttcctgaaaaccagctgccaggac
ttcctgtcctcgggtctgaagtaccagcacctccagccgccctcgccggagatcgactac
atcccgctgcgggtggagctgaggcagcgcggctccagggcgctgctgcattcagagtcg
gtgtggttgccggttctgatccacggtgcgttgcctaaccagcctcctgctgcgtccttc
atgacgtctctgatcctggaggtggaccagttcatcctgacgccggttaccacggcgacg
ctggacgccaccgacgccgagacgccacgggaggagctcgtcttcaacgtgaccgtgccg
ccggcggccggctacatcacgcacctggacgaccacgccaagcccgtctcgtccttcacc
tggcgagacctgcacggcatgaaggtggcctaccagccgcccagcagcagccaatcacag
cgcagcaactaccaggtggagtttcaggcgatagacggttcctacatgaccagcccgccc
atctcggtccacatctccatccgggcggccgaaacgaacgcaccccgagtctcctggaac
atgggtctggatttgctggagggtcagtcccgaccaatcacgtgggaggagctgcagatc
gtcgacaacgacaacatcaacgcggtttacctggttgccgtggacgggccgctccacggg
cgcctcaccgtcagaggcgggaaggcgttcatgttccgcgtgcaggacctgcgtgacggc
gtggtcgtctaccaccactccgacagcgacaccacgcgcgaccacatcgtctttcgcatc
agcgacgggcgccacagcatccgccacaagttccccgtcaacatcctgcccaaagacgac
tcgccgccgttcctcatcaacaatgtggcgctggaggtgcaggagggcacagccgtgcgg
ctggaggacttcacgctactcgccgctgacctggactccagcgatgactacatcctgtac
cagctgacctccggcccccgggcggggcagctggtccggaagacctcagcccacgagaca
ggagagcaagtggacagtttcttgcagcgggatctgatccagggtcagatctactaccag
cactcaggagaggagcagtttgaggactcgttcgacttcacgctgtctgacagccaccag
ccgcccaacctctcccagacatacacggtggtggtccatgttttcccggtgaaggaccag
ctgccggtggaagtctccggcagcgtgcgttcgctgacggtgaaggagacggaggtggtg
tacatcactcagtctcacctccacttcaccgacacagagcatccggacacagacctgacc
tacgtcatcacagagccctgcttcagcccactgcatcctgggctgatggacgcagggcgc
ctgttctacaccgacagcaccaacgccatgaagagagaccacacggtgccggtgttgaag
tccttcacacagcatgctgtgaaccacctgaaagtggccttcatgcctccggtggaggac
atcgggcccgagcccctgggggtccggttcgtgttctcggtgagcgataaccacggcggc
accgtctcgggcctcctcttcaacatcagcgtgacccccgtggatgaccaggcgccacag
gccttcaccaacctgctgcgggtggaggaggggggggcagccttggtgacggaggagcac
ctcctggtccgggaccgggacagtcccgaggaggcgctgggggcggagcttcagaggaca
gctcgccacggccgcctggagctgcagggccggacgctgctgctgggggacgcattcaca
ctgcaggacctgagaggactacgactcaggtacatccacgatgactccgagacgacggag
gacgaggtccatctgaaggtgacggatggtctcaacgccgccgacgtcgtcctggcaata
caggtcctgccgatgaacgacgagcccccccagctggatgggggtctgcggggggagctg
agctgtgaggagggggggcaggtgcaggtgacagtggactacctgtcggccacagaccgg
gacagcgaggactccagactgacctacatgctggcccggagtcccggcagaggggcggtg
cagcgagccgggctcaccgtggacaagttctcccagcaggacctgctgcagggacacgtc
tactacgtccacacagggggagagatcggcgccgagccagtgttcgacaccgtcaccctc
atcatctccgacggcgaggctgggggcacggacggctgttgtcacggcgacgcctccccc
ccacctgtgcccctccacggcacacttcctgtgtacgacctcaacatcaccatacttcct
gtcaacgacaaagtccccaccgtcactctgggtgagtctctgttggtggtggacgaaggc
tcctgggcctgtctgtgtgggggggtcctgggggcctcggaccccgacagcccccccgac
cagctgaccttccacctggagaccccccctctccacggcttcctggagaacacgctgccg
gcgccaggctccgagaagagcagcgccggggtcccactcgaatccttcagtctcatccac
ctgacctcaggtttcatcaactacgtccaatcagagagcaaaggggcggagccaaccgtg
gaccagctgtccgtcagcgtgagtgacgggctgcaccgctccgcccccatccccttctac
atcatcattaatccgaccaatgacgaggcgcctacgatgctgctcgccaacttcaccgtg
aaggagggagggctgagggagctgactccgtccgtcctgaacggtttcgacctcgacgct
ccccctgacgtcctgaccttcacgctggtgcggccgccggctcacgggcgcctgatcaac
ggcgtctacggcacggagacgagccgctacacggagatgggagcggagctgctgcagagg
agcctctccgtcacctccttcaccctgcaggagctccgacaaggcttgaagatcgtgtac
atgcacgatgacacagaaaccctgaaggacagcgtggctctgctgctgacagatggcgtc
cacacagtccaggggacggctcaggtcaccgtgctgccggtcaatgaccagaagccccga
ctgctgaagaacgcggggttggaggtggactccgggcagcgccgggtgatctccagcgtg
gcgctgcacgccgaggatctggactcgcccgccgatcagctgttctacttcctgaacgcg
gcgccgcgcttcggcaaactgcagctcaagacggggtccggttggacggagctgtcgccg
ggtcagaacttcactcaggacgccgtggagatgaactgtgtgtggtacgcacacaccgcc
acagacgggttcaaaggtcacgacagcttccgcttcaccctcagtgacctggacaacgag
accccggcacagagcttcttcatctctgtccacacggtgcagaaaggtgacttgttgctg
cgcaccgagacggtgcgcctggcggagggccgccgcgtcgtcctgacgacggatgtcctg
ctggcgcgggacgcctctggccggccggaggagctgctctacgccgtgtcggtgccgccg
cggcacggcctggtgcacgccgtccggcggccgggcgtcccgctgagctccttcacgcag
ctggacgtggcggcgcaccgagtctgctacacgcacgacaacagccggcacgccgaggcc
gacgccttcagtttcgtcgtcacaaacggcgactcgtcccgcagcggcgtgctccgcttc
gccatcgagcacggcgaccgcatcccgccgacgttgcatcacaacgctggtctccggctg
caggacggcgccacgaagaccgtcaccggcgccgagctgcagctcaccgacccggacacg
gccgcggccaacctgagcttcgtggtcacgcagccgccgcgccacggccgactgctgctg
ggaggagtcccgctgactccgccgctggcgttcacgcaagcggacgtggacgagatgaag
ctggcttaccggcacgaccgggccagcccggccgacatcgacaggttctacttcctgccg
acggacgggaacaacagaggatacctggagtttgggcagctgagagacgagccggctgtc
ttcaacatacaggtggatcgggtggataggacgccccccagtctgaccaccaggcggagt
cccagcaccgtggtggatctgggcgccgggcgttacggcatcctcatcacctccaaacac
ctgcaggcgttcgaccccgacagccccgccgagcagctggagttctccatcagccggccg
ccaaacttcggctacctggagaacgcgctcacaggagcttacatcaaaggtcgtttcacc
cagcgggacgtggaccagcgcgccgtggtgttcgtcctcccggccgacatggaggtgacg
gccgacagcttccagttccgcctcaccgacccggcaggaaacaccatgctgccagagata
ttggagctatcctggtcccgggtggagttgtcagcaacctgctaccgaacctgcgagaca
tcggggacccttcagatccagatccaacgcagcgggaagagcgttgacccagcgtacgtt
gctatccaggtggaggaaggatcggccaaactcggcagagatttcactcacagcacagcc
ggtctcatccagtttgacccaggagtcagtatgaaaacttggaacatttatctgatcgac
gatggcctggaggaaaaccacgagaccttcactgtcaccctgaaaaaaccccaaaacgcc
gtcctgggacagaggacgtccgctagtgtcgagatcatcgatccaagaggagggcggtgc
gatccagatgacctgagggtggacgacgacagcaagcgactccctcctcttcctcttcct
cttcctcgcctcccggacactcccagaccggaggaggaccccgtcaccgacattgaggcg
gagctgttgtgggagaaccagcctcaccctccccgaggagacgtcccaaaccggcggccc
tacctggactacggagagggggaaccacaggaccagccggcccccggcagctccagccac
gtcttccaccacagcaggcagccactggggggcgctactgggagcactgggagcactggg
agcactgggagcactgggcacagcgtcagaaatggaggattaaaggtgcatctgtcagga
gagaggaggtctgaggagaaggtctggacgttccacagtctgactcctctgcgggtggag
gagctgaggccgagcgatgccggctggagcctccttcaggatcctcctcagatggatcat
ccagaacccagacgccacccagatctacgccagcgcaagacagggaagtcagtgagcagc
tcgtgtcccgacggttggactcactacaggagacgctgttacatcgtcggctcgtcggtg
gccagctgggggagcgccgagaggagctgctcgctgctgtttaacagcagcctgaccggc
gtgcgctccagaagagacctggcctggctgtggaagtttgccgggaggaagccattttgg
atcggtctgtctggaggttcgggacgctggatttgggctgatggtggctcagtgtccttc
tccagactgaggggggcgccaccgggccacggcgagtcccacggcaagtcccacggcgag
tcccacggcgactcggactgcgtgctggttgaaaacccccgaagctggatctccacaagc
tgctcccccgaaactcaacacacatttatctgttcctcggtggctcacactcactga
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