Perca flavescens (yellow perch): 114562389
Help
Entry
114562389 CDS
T07494
Name
(RefSeq) cadherin-related tumor suppressor-like
KO
K16669
protocadherin Fat 4
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pflv04515
]
114562389
Cell adhesion molecules [BR:
pflv04515
]
Cadherins
Cadherin related
114562389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
114562389
NCBI-ProteinID:
XP_028444571
LinkDB
All DBs
Position
10:complement(19482707..19495485)
Genome browser
AA seq
3231 aa
AA seq
DB search
MSTRTLWSTLGICIVVVILDCCWEAVFGQLSYSVSEEVNQGTSVGNLAKDLNLNVHDLEA
RMFQIVSGSNRKYFDVNLKTGVLYVNERIDREELCAKATKCTVDVEAVINNPLKLYRLEV
DIVDINDNAPYFPENLQSLNIAESTVQGGKFGFIGASDLDVGKNSVSTYKISPNDYFSLE
IHKGGEAVAAELVLQKALDREKQRTVRLTVTAVDGGNPPKSGTSQIIINVLDNNDNAPVF
SSSLYKARISENLAVGKTVIILNATDADEGLNAEIEYSLRSRGQDRVLDLFQIDSKTGAI
LIKGKIDYEEHPAFEIHAQANDKGQPPMSAHCKVLVEVVDLNDNAPEITVTSILNTVKED
TEVGTAIALVSVLDKDGGKNGVVKAVILNESPFKLDTNYKNYYSLVVDGPLDRETMAEYN
VVIVATDEGTPPLSSTNIVTVHVSDVNDNPPRFSESLINVYVKENSPVGAVIKTVTAVDV
DISQNGQVSYSFLQSNSNSVPLSTMVNINSETGDIVSLQSFNYEELKTFQFKVQATDSGV
PPLSSNVTVNVLILDENDNNPTILAPYSEQGSVNSESIPYSAEAGYFVAKIRAVDADSGY
NALLSYHLSEPKGNNLFRIGTSTGEIRTKRRMSDNDLKTHPLVVLVSDNGEPSLSATVSI
DVVVVESTADIQTQFRHVPIKEESFSDLNLYLLIAIVSVSVIFLLSLISLIAVRCHRTDG
SFSRYSAPMITTHPDGSWSYSKSTQQYDVCFSSDTLKSDVVVFPAPFPPVDAELISINGG
DTFTRTQTLPSTDKCQHFLLEYIFPDLDLFVVTYSTDLPTCSFSMYGIMHLPSRRSSVWI
SLLVVLLDCYWEAVSGQLSYSVSEEVNLGTVVGNIAKDLNINVQDLESRLFQIVAGSKRK
YLEVNLKTGVLYVNERIDREELCGDEPKCSLSVEAVINNPLKLYRIEIIILDVNDNSPSF
LSTSQLMNITESTAAGAKFPLHPAHDADVGKNTVNSYKLSQNEHFSLATHKGESVTAELL
LQKVLDREKQSVIRLVLTAIDGGTPAKSGSMTIIVNVLDINDNPPVFNQTLYKASMYENA
KIGTSIITLNATDLDAGPNGQVVYSFSEVGRGKQTDLFAIDEKTGTVTNKKNIDFEENNA
FEIRVQASDGASSPLTSNAKLLIEVLDVNDNAPEISVTSLLNTVKEDASTGAAIALVSVF
DKDGGKNGMMNCKISNHFPFKLESNYKNYYSLVVDGPLDRESASQYNITITATDEGSPPL
ATTSVINVHVSDVNDNTPMFTENIINVYVKENSPVGAVLKKVSAIDADIDQNGQVSYSFL
QSNSNSLPLSTMININSETGDIVSLQSFNYEELNTFQFKVQATDSGVPPLSSNVTVNVLI
LDENDNNPTILAPYSEHGSVNSENIPYSAEAGYFVAKIRAVDADSGYNALLSYHLSEPKG
NNLFRIGTSTGEIRTKRRMSDNDLKTHPLVVLVSDNGEPSLSATVSIDVVVVESTADIQT
QFRHVPIKEESFSDLNLYLLIAIVSVSVIFLLSLISLIAVRCHRTDGSFSRYSAPMITTH
PDGSWSYSKSTQQYDVCFSSDTLKSDVVVFPAPFPPVDAELISINGGDTFTRTQTLPNTD
KRDLPTCSFAMYGIMHLPSRRSSVWISLLVVLLDCYWEAVSGQLSYSVSEEVNLGTVVGN
IAKDLNINVQDLESRMFQIVAGSKRKYLEVNLKTGVLYVNERIDREELCGDEPKCSLSVE
AVINNPLKLYRIEIIMLDVNDNFPSFLSTSQIINISENIAIGAKFPLHPAHDADVGKNTV
NSYKLSQNEHFSLATHKGESVTPELLLQKVLDREKQSVIRLVLTAIDGGTPAKSGSMTII
VNVLDINDNPPVFNQTLYKASVYENAKIGTSIITLNATDLDAGPNGQVVYSFSEVGRGKQ
TDLFAIDEKTGTVTNKKNIDFEENNAFEIRVQASDGASSPMTSHAKLLIEVLDVNDNAPE
ISVTSLLNTVKEDASVGAAIALVSVFDKDGGKNGMMNCKMSNHVPFKLESNYKNYYSLVV
DGPLDRESASQYNITITATDEGSPPLSTTSVINVHVSDVNDNTPMFTESIINVYVKENSP
VGAVLKKVSAIDADIDQNGQVSYSFLQSNSNSLPLSTMININSETGDIVSLQSFNYEELN
TFQFKVQATDSGVPPLSSNVTVNVLILDENDNNPTILAPYSEHGSVNSENIPYSAEAGYF
VAKIRAVDADSGYNALLSYHLSEPKGNNLFRIGTSTGEIRTKRRMSDNDLKTHPLVVLVS
DNGEPSLSATVSIDVVVVESTADIQTQFRHVPIKEESFSDLNLYLLIAIVSVSVIFLLSL
ISLIAVRCHRTDGSFSRYSAPMITTHPDGSWSYSKSTQQYDVCFSSDTLKSDVVVFPAPF
PPVDAELISINGGDTFTRTQTLPNTDKVECRTSLFRIYLVAVLLNYCWEAVYGQLSYSVS
EEVIPGTSVGNIAKDLNINVQDLESRMFQVVAGSKRKYFDVNLKTGVLYVNERIDHEELC
PKATKCTVNVEAVINNPLKLYRLEITIIDINDNAPVFSEQLQSLNIAESTLPGVKFGLIE
ASDLDVGKNGVNTYKLSNNGYFSLEIHKGGDSVSAELVLHKSLDREHDSVIKLTLTAVDG
GNPSRSGTSQIIINVLDTNDNNPVFSRSLYKIQIFENLPPGSIVISLNATDADEGLNSEI
EYSLRKKGQDRVLDLFQIDSKTGAILIKGKIDYEEHPAFEIHAQASDKGQPPMSAHCKVL
VEVVDLNDNAPEITVTSLLNTVKEDTEVGTAIALVSVLDKDGGKNGVVKAVILNESPFKL
DTNYKNYYSLVVDGPLDRETMAEYNVVIVATDEGTPPLSSTNIVTVHVSDVNDNPPRFSE
PLINVYVKENSPVGAVIKTVTAVDVDISQNGQVSYSFLQSNSNSVPLSTIVNINSETGDI
VNLQSFNYEELKTFQFKVQATDSGVPPLSSNVTVNVLILDENDNNPTILAPYSEHGSVNS
ESIPYSAEAGYFVAKIRAVDADSGYNALLSYHLSEPKGNNLFRIGTSTGEIRTKRRMSDN
DLKTHPLVVLVSDNGEPSLSATVSIDVVVVESTIDIQTQFRHVPIKEESFSDLNLYLLIA
IVSVSVIFLLSLISLIAVRCHRTDGSFSRYSAPMITTHPDGSWSYSKSTQQYDVCFSSDT
LKSDVVVFPAPFPPVDAELISINGGDTFTRTQTLPNTDKVWFVTEALSVCN
NT seq
9696 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgcggactttatggagcactttggggatttgtatagtcgttgttattttggat
tgttgctgggaagcggtatttggacagctctcttactctgtatcagaggaggtaaaccag
gggacatctgtgggaaatcttgctaaagatctaaaccttaatgttcacgacttggaagca
cgtatgtttcagattgtaagcggatcaaatagaaaatatttcgacgtaaatctgaaaact
ggtgttctatatgtcaatgaaagaatcgaccgcgaggagctgtgtgcgaaggctacaaaa
tgtactgtcgatgtagaggccgtaattaacaatccactaaagctttaccgtttggaggta
gatatagtcgatataaacgataatgcgccatatttccctgagaatttgcagtctcttaac
attgctgaaagtactgtgcaaggagggaaatttggattcataggggcatcggatctcgat
gttggtaagaatagtgttagtacatacaagataagtccaaatgattatttttctttagag
attcacaaaggcggagaggctgtggctgccgagcttgtgcttcagaaagctttagaccga
gaaaaacaacgcactgtaagactcacagtaacagcagtcgacggaggaaatccacctaaa
tcaggaacgtctcagatcattatcaatgttttagacaataacgacaacgctccggttttc
agcagttctttatacaaggcacggatttctgagaatttagcagtaggcaaaactgttata
attctgaatgcaacagacgcagatgagggattaaatgctgaaatagaatattcattgaga
agtagaggtcaggatcgtgttttagatttatttcaaattgattctaaaacaggtgcaatt
ttaatcaaaggtaagatcgactatgaagaacatcctgcgtttgagattcatgcacaggct
aatgacaaaggccagcctccgatgtcggctcattgtaaggtgctggtagaagtggtggac
ctaaatgacaacgctcctgagatcactgtgacgtcaatattaaacacagtgaaagaggac
acagaagttggtactgctatagcacttgtctctgtactggacaaagatggtggaaaaaac
ggtgtagtaaaagcggtcattctgaatgagagccccttcaaattagacacaaattataaa
aactattattcgttagtagttgatggtccacttgacagagaaacgatggccgagtacaat
gtcgtcatcgtcgcaactgatgaagggactccacctctctccagcaccaacatagtgaca
gttcatgtttctgacgtcaatgataacccgcctcgcttctcagagtcactgattaatgtt
tatgtgaaagagaacagtccagtaggagcagttattaaaacggtgactgcagttgatgtc
gatatcagtcaaaacggtcaggttagctattcttttttacaaagtaacagtaactcagta
ccgctgtctacaatggtaaacatcaactcagagactggagatatagtcagcctgcagtct
tttaactacgaggagttaaaaacgtttcagtttaaagttcaggccacagactctggtgtt
cctccgctcagcagcaacgtgactgtgaacgttttaatcctggatgaaaatgacaataat
ccaacaattctcgcgccctattctgagcagggctccgttaacagtgagagcatcccctat
tctgctgaagcgggatactttgtggcaaagatcagggctgtagacgcagactctggatac
aatgcgctgctttcttatcacctgtctgagcccaaaggaaacaacctcttccggatcgga
accagcaccggagaaatcaggactaagaggagaatgagtgacaatgacctgaaaactcac
cccttggtggtgttggtttctgataacggagaaccctccctgtcagctactgtgtctatt
gatgtggtggtggttgaaagcacagctgacatccagactcagttcagacacgtgcccata
aaggaggagagcttctctgatttaaacctgtatctgctgatcgccatcgtgtcggtgtca
gtgatctttctgctgagtctcatcagtttaatagctgtcagatgccacaggacagacggc
agtttcagcaggtacagcgccccaatgatcaccacccaccctgacgggagctggtcttac
tctaaatctactcagcagtatgacgtgtgtttcagctcagacacgctgaaaagtgacgta
gtggttttccccgcaccgtttccgcctgttgatgctgagctgatcagtattaacggagga
gacacttttaccagaactcagactttacccagcacagacaagtgccaacattttttattg
gaatatatctttccagatcttgatctctttgttgtaacatatagtacagatttgcctaca
tgttccttctcgatgtatggaataatgcatttgccgagcagaaggagctctgtgtggata
tctctcttggtcgtgctgctggattgttactgggaagcggtgtctgggcagctctcttac
tccgtctcagaggaggtaaatctggggactgttgtcggaaacatcgctaaagatctgaac
atcaatgtccaggatttggagtcccgcttgtttcagatcgttgcaggatcaaagagaaaa
tatctcgaggtaaacctaaagactggtgtcctgtacgttaatgagagaatagatcgagag
gaactctgcggcgatgaaccaaaatgttcgctcagtgtagaagcagttattaataaccct
ttaaaactgtaccggattgaaataatcattttagatgtgaatgataattccccgtcattc
ctcagcacatctcaattaatgaacattacagagagtacagcagcaggggctaaattccct
ctgcatccagctcacgatgcagatgtcggtaaaaatactgtaaatagctacaagcttagc
caaaatgaacacttctctctcgctacacataaaggagagagtgttaccgccgaattactg
cttcagaaagttttagacagagaaaaacagtctgtgatccgactcgtactgactgccatt
gatggaggcactcctgctaaatctggcagtatgactataatagtaaatgtattggacatt
aatgataatcctcctgtattcaaccaaactctctataaagccagtatgtatgagaacgct
aagataggaacatcgataataacattaaatgcgactgatttggatgcaggcccaaatgga
caggtagtatattcgttcagtgaagtaggccgaggtaaacaaactgatctgtttgctatc
gatgaaaaaactgggactgtaacaaataaaaagaatatcgactttgaagagaataatgcg
tttgagattagagtacaagccagtgatggagcttcatctcctctcacctcaaatgccaaa
ttattgattgaagttttagacgtcaatgacaatgcccctgaaatttcagttacttcactg
ttgaacaccgtgaaggaggatgcgtctactggcgccgccattgcgcttgtttcagtattt
gataaagacggaggtaaaaatgggatgatgaactgtaaaatttccaatcattttcctttt
aaattggaatccaattataagaattactactcgttggtggtggacggtcctcttgacaga
gagagcgcatctcaatacaatatcaccatcacagcgactgatgagggcagcccacctctc
gccaccacgagcgttattaatgtgcacgtctcagatgtgaatgataatacacctatgttc
acagaaaacataatcaatgtatatgtgaaagaaaacagtccagtaggagcagttttaaaa
aaggtttcagcaattgacgcagacatcgatcaaaacggtcaggtgagctattcattttta
caaagtaacagtaactcattgccactctcgactatgataaacatcaactcagagactgga
gatatagtcagcctgcagtcttttaactacgaagagttaaacacgtttcagtttaaagtt
caggccacagactctggtgttcctccgctcagcagcaacgtgactgtgaacgttttaatc
ctggatgaaaatgacaataatccaacaattctcgcgccctattccgagcacggctccgtt
aacagtgagaacatcccctattctgctgaagcgggatactttgtggcaaagatcagggct
gtagacgcagactctggatacaatgctctgctttcttatcacctgtctgagcccaaagga
aacaacctcttccggatcggaaccagcaccggagaaatcaggactaagaggagaatgagt
gacaatgacctgaaaactcaccccttggtggtgttggtttctgataacggagaaccctcc
ctgtcagctactgtgtctattgatgtggtggtggttgaaagcacagctgacatccagact
cagttcagacacgtgcccataaaggaggagagcttctctgatttaaacctgtatctgctg
atcgccatcgtgtcggtgtcagtgatctttctgctgagtctcatcagtttaatagctgtc
agatgccacaggacagacggcagtttcagcaggtacagcgccccaatgatcaccacccac
cctgacgggagctggtcttactctaaatctactcagcagtatgacgtgtgtttcagctca
gacacgctgaagagtgacgtagtggttttccccgcaccgtttccgcctgttgatgctgag
ctgatcagtattaacggaggagacacttttaccagaactcagactttacctaacactgac
aagagagatttgcctacatgttccttcgcgatgtatggaataatgcatttgccgagcaga
aggagctctgtgtggatatctctcttggtcgtgctgctggattgttactgggaagcggtg
tctgggcagctctcttactccgtctcagaggaggtaaatctggggactgttgtcggaaat
atcgctaaagatctgaacatcaatgtccaggatttggagtcccgcatgtttcagatcgtt
gcaggatcaaagagaaaatatctcgaggtaaacctaaagactggtgtcctgtacgttaat
gagagaatagatcgagaggaactctgcggcgatgaaccaaaatgttcgctaagtgtagaa
gcagttattaataaccctttaaaactgtaccggattgaaataataatgttagatgtgaat
gataatttcccgtcattcctcagcacgtcgcagataattaacattagtgagaatatagca
ataggggctaaattccctctgcatccagctcacgatgcagatgtcggtaaaaatactgta
aatagctacaagcttagccaaaatgaacacttctctctcgctacacataaaggagagagt
gtaactcccgaattactgcttcagaaagttttagacagagaaaaacagtctgtgatccga
ctcgtactgactgccattgatggagggactcctgctaaatctggcagtatgactataata
gtgaatgtattggacattaatgataatcctcctgtattcaaccaaacactctataaagcc
agtgtgtatgagaacgctaagataggaacatcgataataacattaaatgcgactgatttg
gatgcaggcccaaatggacaggtagtatattcgttcagtgaagtaggccgaggtaaacaa
actgatctgtttgctatcgatgaaaaaactgggactgtaacaaataaaaagaatatcgac
tttgaagagaataatgcttttgagattagagtacaagccagtgatggagcttcctcgccg
atgacatcacatgccaaattattgattgaagttttagacgtcaatgacaatgcccctgaa
atttcagttacttcactgttgaacaccgtgaaggaggatgcgtctgttggcgccgccatt
gcgcttgtttcagtatttgataaagacggaggtaaaaatgggatgatgaactgtaaaatg
tccaatcatgttccttttaaattggagtccaattataagaattactactcgttggtggtg
gacggtcctcttgacagagagagcgcatctcaatacaatatcaccatcacagcgactgat
gagggcagcccacctctctccaccacgagcgttattaatgtgcacgtctcagatgtgaat
gataatacacctatgttcacagaaagcataatcaatgtatatgtgaaagaaaacagtcca
gtaggagcagttttaaaaaaggtttcagcaattgatgcagacatcgatcaaaacggtcag
gtgagctattcatttttacaaagtaacagtaactcattgccactctcgactatgataaac
atcaactcagagactggagatatagtcagcctgcagtcttttaactacgaagagttaaac
acgtttcagtttaaagttcaggccacagactctggtgttcctccgctcagcagcaacgtg
actgtgaacgttttaatcctggatgaaaatgacaataatccaacaattctcgcgccctat
tccgagcacggctccgttaacagtgagaacatcccctattctgctgaagcgggatacttt
gtggcaaagatcagggctgtagacgcagactctggatacaatgctctgctttcttatcac
ctgtctgagcccaaaggaaacaacctcttccggatcggaaccagcaccggagaaatcagg
actaagaggagaatgagtgacaatgacctgaaaactcaccccttggtggtgttggtttct
gataacggagaaccctccctgtcagctactgtgtctattgatgtggtggtggttgaaagc
acagctgacatccagactcagttcagacacgtgcccataaaggaggagagcttctctgat
ttaaacctgtatctgctgatcgccatcgtgtcggtgtcagtgatctttctgctgagtctc
atcagtttaatagctgtcagatgccacaggacagacggcagtttcagcaggtacagcgcc
ccaatgatcaccacccaccctgacgggagctggtcttactctaaatctactcagcagtat
gacgtgtgtttcagctcagacacgctgaagagtgacgtagtggttttccccgcaccgttt
ccgcctgttgatgccgagctgatcagtattaacggtggagacacttttaccagaactcag
actttacccaacacagacaaggtagagtgcagaacgagtctttttcggatatatcttgtg
gccgtgctgctaaattattgctgggaagcggtgtatggacagctctcctactctgtctca
gaggaggtaatcccggggacttctgttggaaatatcgccaaggatctaaatatcaatgtc
caggatttagagtctcgtatgtttcaggttgttgctggatcaaagagaaagtatttcgat
gtaaatctgaaaactggtgttctttatgtcaatgaaagaatagaccatgaggagctgtgt
ccgaaggctacaaaatgtaccgtcaatgtagaggccgtgatcaacaatccacttaagctt
taccgtttagagataactataatagatataaatgataatgcccccgttttctcagagcaa
ttgcagtcacttaacattgcagaaagtactttaccgggagtgaaatttggactaattgag
gcatcggacttggatgttgggaagaacggagttaatacatacaagcttagtaataatggt
tacttttctttagaaatccacaaagggggagacagcgtgtctgctgaattagtactgcat
aaatctttagaccgagaacacgactctgtaataaaacttacactaactgcagttgatgga
ggaaatccatccagatcgggaacctcacaaattattatcaacgttttggatactaacgac
aacaatcctgtttttagtagatctttgtacaaaattcaaatatttgaaaacttgccacca
gggtcgattgtgataagtcttaatgcaacagacgcagatgagggtttaaacagtgaaata
gaatactcgttgagaaaaaaaggtcaggatcgtgttttagatttatttcaaattgattct
aaaacaggtgcaattttaatcaaaggtaagatcgactatgaagaacatcctgcgtttgag
attcatgcacaggctagtgacaaaggccagcctccgatgtcggctcattgtaaggtgctg
gtagaagtggtggacctaaatgacaacgctcctgagatcactgtgacgtcactattaaac
acagtgaaagaggacacagaagttggtactgctatagcacttgtctctgtactggacaaa
gatggtggaaaaaacggtgtagtaaaagcggtcattctgaatgagagccccttcaaatta
gacacaaattataaaaactattattcgttagtagttgatggtccacttgacagagaaacg
atggccgagtacaatgtcgtcatcgtcgcaactgatgaagggactccacctctctccagc
accaacatagtgacagttcatgtttctgacgtcaatgataacccgcctcgcttctcagag
ccactgattaatgtttatgtgaaagagaacagtccagtaggagcagttattaaaacggtg
actgcagttgatgtcgatatcagtcaaaacggtcaggttagctattcttttttacaaagt
aacagtaactcagtaccgctgtctacaatagtaaacatcaactctgagactggagatata
gtcaacctgcagtcttttaactacgaggagttaaaaacgtttcagtttaaagttcaggcc
acagactctggtgttcctccgctcagcagcaacgtgactgtgaacgttttaatcctggat
gaaaatgacaataatccaacaattctcgcgccctattctgagcacggctccgttaacagt
gagagcatcccctattctgctgaagcgggatactttgtggcaaagatcagggctgtagac
gcagactctggatacaatgctctgctttcttatcacctgtctgagcccaaaggaaacaac
ctcttccggatcggaaccagcaccggagaaatcaggactaagaggagaatgagtgacaat
gacctgaaaactcaccccttggtggtgttggtttctgataacggagaaccctccctttca
gctactgtgtctattgatgtggtggtggttgaaagcacaattgacatccagactcagttc
agacacgtgcccataaaggaggagagcttctctgatttaaacctgtatctgctgatcgcc
atcgtgtcggtgtcagtgatctttctgctgagtctcatcagtttaatagctgtcagatgc
cacaggacagacggcagtttcagcaggtacagcgccccaatgatcaccacccaccctgac
gggagctggtcttactctaaatctactcagcagtatgacgtgtgtttcagctcagacacg
ctgaagagtgacgtagtggttttccccgcaccgtttccgcctgttgatgctgagctgatc
agtattaacggaggagatacttttaccagaactcagactttacccaacacagacaaggta
tggttcgtcactgaagcgctttcagtttgcaattga
DBGET
integrated database retrieval system
