Perca flavescens (yellow perch): 114562752
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Entry
114562752 CDS
T07494
Name
(RefSeq) protocadherin-11 X-linked-like
KO
K16498
protocadherin delta 1
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
114562752
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pflv01009
]
114562752
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pflv04515
]
114562752
Protein phosphatases and associated proteins [BR:
pflv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114562752
Cell adhesion molecules [BR:
pflv04515
]
Cadherins
Protocadherins
114562752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
TMEM154
DUF6249
DUF6377
Motif
Other DBs
NCBI-GeneID:
114562752
NCBI-ProteinID:
XP_028445135
LinkDB
All DBs
Position
10:17680735..17703180
Genome browser
AA seq
1043 aa
AA seq
DB search
MDLISQAHVLVVFLTCVVLLCWAQERDYTVKEEQPENVRIGNLRKDLDLNLDPNIRLSSP
LQFKPVYKTGDVPLVRVEANTGEIFTTNHRIDREKLCSGVFAEKRCYYEIEVAVLPDEIF
RLVKIRFLIEDVNDNAPLFQSTVINISIPENTAINTRYPVPSAFDPDVGINGIQHYELVK
SVSEFGLDIIETPEGDKWPQLIVQHNLDREQKDTFVMKIKVEDGGNPPKSSTAILQVTIS
DVNDNRPVFKDSELEVSVPENAPMGTSVAQLHASDADLGSNAQIHFAFSNQISASTKRHF
SIDSSTGLITVKQPLDREVTPVHKLIVLASDGSSTPSRATVIVNVTDVNDNVPSIDTRYI
INLVNGTVLLSENAPLNTKIALITVTDKDADLYGKVACYTDHDVPFRLKPVFNDQFLLET
AAPLDYETTREYAIKIVASDRGTPPLNTSAMVLIKIKDENDNAPIFPQPEIQLSIPENND
PSTQLIKISATDGDSGHNAEIIYTLGPDAPDGFNIDRRSGILSVGKRLDREKQERYSFTV
IARDNGSTSLQSNVTVRLIVQDLNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDADAG
DNAIITLSVLNGKDNFIIDPQTGVIKPNITFDREQQSSYTFMVKAVDGGQPPSSSYAKVT
INVVDVNDNRPVFVLPSSNYSYDLVRTTTTPGAVVTRVFAIDNDTGMNAELQYSIISSII
ITSRVSPRGLFAIDKTTGNITLQEKIVTADQGLHRLVVKVKDLGQPESLHAIALIHLFVN
DTVSNATFIQEQLRKSMETPLDRNIGDSEVTPQANGYVIVVIAIIAGTMTVILVIFVTAL
VRCRQTPRHKVVQKGKQSGEWVSPNQDNRQIKKKKKRKKRSPKSLLLNFVTIDESKPDDP
THEHVNGTLDLPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPV
APKKHHVIQELPLDNTFVVGCDSLSKCSSTSSDPYSVSECSCQGGFKTAGQITTRQETAL
KPPHYGTLCGTGTTRSHRIKINL
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggacttaataagtcaggctcatgtgctggtggtcttcctcacctgtgtggtcttgcta
tgctgggcccaggagagggactacacggtaaaggaggagcagccagagaacgtccgcatc
gggaacctgcgcaaggacctggacctcaacctggacccaaacatcaggctatcctcaccg
ctgcagttcaagcctgtgtacaagacaggtgatgtgcctttggtgagggtggaggccaac
acgggggagatctttaccaccaatcacagaatcgaccgggagaagctgtgttcaggggtc
ttcgctgagaaacgctgctactatgagattgaggtggccgtgctgccggatgagatcttc
cgattggtcaagatccgcttcctgattgaggatgtaaatgacaacgcaccccttttccag
tccactgtaataaacatatccatcccggagaacacagccatcaacacccgatacccggtg
ccctcagcatttgaccctgatgtagggatcaatgggattcaacattatgaactggtcaag
agtgtcagcgagtttggcttagacatcatagagactcctgaaggtgacaagtggccacag
cttattgttcagcacaacctggatcgtgagcaaaaggacacatttgtcatgaagataaag
gtagaggatggtggcaaccctcccaagtccagcactgccatcctccaagtcaccatctcc
gatgtcaacgacaatcgtcccgtcttcaaggacagtgagctggaggtctcagtgccagag
aatgcccccatggggacatcggttgctcaacttcacgcctcggacgcagacctgggttcc
aacgcacagatccactttgccttcagcaaccagatctctgcctcaaccaaacgtcacttt
tccattgacagttctacgggactgatcactgtgaagcagccactggacagggaggtaact
cctgttcacaaactcatcgtccttgccagtgatggcagctccaccccctccagagccaca
gtgattgttaatgtaacagatgtaaatgacaatgttccctccatagacactcgctacatt
atcaacctggttaatgggactgttctgctgtctgagaatgcacctctcaacaccaaaata
gcccttatcactgttactgacaaggatgcagatctttatggcaaagtagcttgctacact
gaccatgatgttccttttcggttgaagcctgtctttaatgatcaattcttactagagaca
gctgcccccttagattatgagacgactcgagaatatgcaattaagatagtggcctcggat
aggggaacgcctcctttgaacacttcagctatggttttaattaaaatcaaggatgagaac
gacaatgcacccatcttcccccagccggaaatccaactttctataccggagaacaatgac
ccctctacacagttaataaaaatcagcgccactgacggagacagtggacataatgctgag
attatttatactcttggccctgatgcgcctgacgggtttaacatagacagacggtcagga
attctctccgttggcaagcgactggacagagagaagcaggagaggtactcattcactgtc
atagcgagggacaatggctccacgtccctgcagagcaatgtcactgtcaggctaatcgtc
caggaccttaatgacaacagcccagctttcacacaccctgagtacaacttctatgtgcct
gagaacctgcctctctatggaactgtgggcttaatcacagtgacggatgcagatgcggga
gataatgccattataaccctgtcagttttgaatgggaaggataatttcatcatcgacccc
caaaccggtgtgatcaaaccaaatattacctttgatagggagcagcaaagctcctacacg
tttatggtcaaggcagttgatggagggcaacctccaagctcctcatacgccaaggtcacc
atcaatgtagtcgatgtgaacgacaatcgccctgtgttcgtcctcccatcctccaattat
tcatatgacctagtgagaaccaccaccacccctggagctgtggtcaccagagtgtttgcc
attgacaatgacacaggtatgaatgctgagctgcagtacagcattatcagcagcatcatc
atcacatctagagtctcccctcgaggtctcttcgccattgataaaacaacgggtaacata
acactgcaagagaaaattgtgacagctgatcaggggctgcataggctggtagtcaaggtt
aaagatctaggccagccagagtcattacatgctatcgcacttattcacttgtttgtcaat
gacactgtgtcaaatgctacctttatccaagagcagctgcgaaaaagtatggagactccc
ttggatcgtaacataggggacagtgaggtaacacctcaagccaacggatatgtgattgtt
gtcatagcaatcatagcagggaccatgactgttatcttggtgatatttgtgactgccttg
gtgcgctgccgacagacacccagacacaaggtggtacagaagggcaagcagagtggcgag
tgggtgtcacccaaccaagacaaccgtcagatcaagaagaagaagaagagaaagaagcga
tcccccaagagcctcctcttgaactttgtgaccatagatgaatccaagcctgacgacccc
acccatgagcatgttaatggtacactggatctccctgtggagttagaggagcaaaccatg
gggaagtacaactgggccaccacgcccaccacattcaaacccgatagcccagatttagcc
aagcattacaagtctgcgtcccctcagcctacatttcaaattaaaccggagactccagtg
gccccaaagaaacaccatgtgatccaggagctccccttggacaacacgtttgtggtgggc
tgtgactcactctccaagtgctcatcgactagctccgacccgtacagtgtctcagagtgc
agctgtcaggggggattcaagactgcggggcaaatcaccacccgacaggagacggcactg
aaaccaccacactatggcacactctgtggcacaggtacaactcgctcccacaggattaaa
atcaatctctag
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integrated database retrieval system
