KEGG   Perca flavescens (yellow perch): 114562767
Entry
114562767         CDS       T07494                                 
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
  KO
K16271  E3 ubiquitin-protein ligase RLIM [EC:2.3.2.27]
Organism
pflv  Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:pflv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pflv04121]
    114562767 (rlim)
Enzymes [BR:pflv01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     114562767 (rlim)
Ubiquitin system [BR:pflv04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    114562767 (rlim)
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-RING_11 zf-C3HC4_2 zf-C3HC4 zf-ANAPC11 zf-RING_5 zf-C3HC4_3 zf-RING_UBOX Prok-RING_4 zf-RING_16 zf-RING_4
Other DBs
NCBI-GeneID: 114562767
NCBI-ProteinID: XP_028445164
LinkDB
Position
10:22082433..22090967
AA seq 702 aa
MEGSDSLEQNGSDQPESQRRRQLDRLDREEAFYQFVNNLSDEDYRLMRDNNLLGTPGEVT
EDELFSRLQQIKDGPEQQNNSTSAPSTESGEDPVEPPENSEDPANGDSLLDWLNTVRRTG
NTTRTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEGEQESPQESPQESP
EGQEVVASAEPQVASAEPQVASAEPQVASAEPQVASAEPEVENAEPEVENAEPELENAEP
QVPMETEVVEEPVVEELAVTVEPEPEPELEEVVSQEILAEPPSSPAALPVQPPLSPSPRR
GQRRARSRSPEPRRTRARTARSRSPLNLDQLDGLPNPRHAHSSQGLNSATFAPPVSQVEG
SSRTRQHVLSRQSIADSDVQPSRASAETVPEAQNVGSQEGEAAGGEGAAAGRRPPTIMLD
LQVRRVRPGEYRQRDSIASRTRSRSQNSNNTFLYESERGGFRRTFSRSERAGVRTYVSTI
RIPIRRISDAGLGEATSMALQSMIRQIMTGFGELGYLMDSDSDSSDSNRGANTPADLAEA
LNNPDAATPAAAPVADVDEPPLATGVRARTAEADVDEGLATAPPPPGGRARPRPPISLEE
PSSLPFLRLAHFFLLNDDDEDQPQGLTKEQIDNLSMRNFGETDALKTCSVCITEYAEGNK
LRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLISANRESVV
NT seq 2109 nt   +upstreamnt  +downstreamnt
atggaagggtctgacagtttagagcaaaatggcagtgaccagccagagtcacagcgcaga
aggcagctggaccgcctggacagggaagaggccttctaccagtttgttaacaatctcagt
gatgaggactaccgtctcatgagagacaacaatcttttgggcaccccaggagaggtaaca
gaggatgagctgtttagtagactacagcaaatcaaggatggtccggaacagcagaataac
agtactagtgctcccagtactgaaagtggagaagatccagttgaaccaccagaaaactct
gaggatcctgccaatggagatagtctcttagactggctaaacacagtgaggcgaacaggc
aacacaaccagaaccggtcatcgtggaaaccagtcatggcgggctgtaagccagaccaac
ccaaacagtggcgattttcgctttagcctggaaatcagtgtgaatcgcaacctggctgaa
cagcaggctgctgctgaaggggaacaggagtctccccaggagtctccccaggagtctcca
gagggtcaggaagtggtggcaagtgctgaaccacaggtggcaagtgctgaaccacaggtg
gcaagtgctgaaccacaggtggcaagtgctgaaccacaggtggcaagtgctgaaccagag
gtggaaaatgctgaaccagaggtggaaaatgctgaaccagagttggaaaatgctgaacca
caggtacccatggagacggaagtggtagaagaaccagttgtagaggaattggctgtcaca
gtggagccagaaccagagcctgaactagaagaagttgtttcacaagagattttagcagaa
cctcccagctcacctgctgccctgccggtacaacccccactttctccttctccacgcaga
ggacaaagaagagcccgcagccgcagtccagaaccacgccggactagggcccgtacagcg
aggagccgctcccctctcaacctggatcagctggatggtctccctaatccacgtcatgct
cacagctctcaaggcctgaactctgccacctttgctccccctgtgtctcaagtagagggc
agttctcggactcgacaacatgttctttctaggcaaagcattgctgacagtgatgttcag
ccatctagggctagtgccgaaacggtcccagaggcccaaaatgtgggatctcaagaagga
gaagctgctgggggggaaggggctgcagcggggcgccgcccccctactattatgcttgat
ctccaggtgcgtcgtgtgcgtcccggcgaatatcgccaaagagacagcattgctagccgc
acccgctcgcgctcccagaactcaaacaacacatttctttatgagagcgagcgtggtgga
tttcgtaggactttctcacgctcggaacgtgctggtgtgaggacctacgtcagcactata
cgcatccctatccgaagaatctctgatgcaggtttgggagaggcaacctcaatggctctc
caatctatgattaggcagattatgactggttttggtgaactcggctacctcatggattca
gactctgattcttcagattcaaaccgtggtgccaacacacctgcggatctggctgaagcc
ctcaacaacccagatgctgctactccggctgccgctcctgttgccgatgtcgatgaacca
cctctggctacaggagttagagcaaggacagcagaggctgatgttgacgagggccttgcc
actgctccacctccccctggtggcagggctcgacctagaccacctatcagcctagaggag
cccagctcgctgcccttcctgaggcttgcccacttcttcctcctaaatgatgacgatgag
gaccagccccaagggctgactaaagagcagattgacaacctctcaatgcgcaactttggt
gagactgatgccttgaaaacttgcagtgtctgcataacagaatatgctgaaggtaacaag
ctacgtaagctgccctgctctcatgagtaccacgtgcactgcattgatcgctggctatcc
gaaaactctacttgccccatctgccgcagggctgtcttgatatcggccaaccgagagagc
gtggtgtag

DBGET integrated database retrieval system