Perca flavescens (yellow perch): 114562789
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Entry
114562789 CDS
T07494
Name
(RefSeq) protocadherin beta-15-like isoform X1
KO
K16499
protocadherin delta 2
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pflv04515
]
114562789
Cell adhesion molecules [BR:
pflv04515
]
Cadherins
Protocadherins
114562789
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
114562789
NCBI-ProteinID:
XP_028445191
LinkDB
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Position
10:complement(19636904..19643174)
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AA seq
1008 aa
AA seq
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MDHRLPKGSWVPMTGLVVCLLLCACVVDLVLAQIRYSIPEELEHGAFVGNIAEDLGLDVA
KLSARRFRIVSGAKRQYLEVNLENGILFVNEKIDREELCERSPNCFLHLQVVIENPLELY
RVEVEILDVNDNSPSFPWSEFNLDITESAAPGSCFPLESAQDQDVGTNSLRSYQLSANEH
FVLNIQTRNDGSKFAELVLDTPLDREQQKKHEMVLTAFDGGSPERSGTALITITVLDAND
NVPVFDRSVYRASLVENAPRGTLVLKLNATDLDEGSNGEVTYAFSGHAPLKVRELFSVDP
YTGEIRVKGIVDYEKASVYELYVQAKDRGPSAVAVHSKVLVDILDVNDNAPEVILTSVST
PVQEDAPPGTVIAVISVMDRDSGENGNVDCQIPSNVPFQLHSSFKNYYTLVTSEFLDRET
VSEYNITLTARDLGSPSLSTRKTILVQVSDINDNPPRFSQPSYTVYVTENNAPGASICSV
TAFDPDSNQNAYLSYSILEGQIQGMPVSTYVSINSDNGNIYALRSFDYEQLRNFQILVQA
QDAGFPPLASNITVNVFVLDQNDNAPVIVSPLPKNGTVATEVVPRSVDAGYLVTKITALD
ADAGQNSRLSYQVLQATDPGLFSVALYTGEIRTIRRLVEKDATRQRLVILVKDNGQPPLS
ATVSIVLTVVDSVPESLSDFGDLTLSPQPASNLALYLIVSLSTISLIFLVAIIVLAVVKC
YKDRETISGYNLPPFACCCCGGFQPDPPPEVFKKSNLNLQISSAAKVPTNCMEVNGNSSL
SQSYCYKVCLTPESAKSDFMFLKPCSPGSTPRNNEAKSAENSWNAQSRSASVNNGATTPN
ELKQPNTDWTLTKNQNSSIKSYNSINMDGTLMRKAMHADPENYVTSMGPGQYWTWGTHMR
GMKDYKMSPSTSGVPSRPWTPRCTPPPQQQQPSIPPHPHPHPPPHPPPDYHHNVYIPGTP
SGFCTLRPAAPRSELDVHNSFSTFGKKRRLQMSPQGEAAIINNDLYND
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggatcacagactccccaaaggcagttgggtaccgatgactgggctggttgtatgtctg
cttctgtgtgcgtgtgtagtggacctggttcttgcgcaaattcggtactccattccagaa
gagctggagcatggagcttttgtgggcaacatcgccgaagacctgggcttggatgtggcc
aagctgtcagcccgccggtttcgtatagtctccggcgcaaagaggcagtatttagaagtg
aacttggagaatggtattctcttcgtcaacgaaaagatagacagagaggagctgtgtgaa
cgaagcccgaactgttttttacacttacaagtggtcattgaaaatccattagaactgtac
agagtggaagtggagattttagatgtgaatgacaactcccccagtttcccatggagcgag
tttaatcttgacatcacagagtcggctgcgccaggctcttgtttcccgttagagagcgca
caggaccaggacgtgggaaccaactctctgcgctcctaccagctaagcgcaaacgagcac
tttgtactgaatatccaaacgcgcaatgatggcagcaagtttgcggagctcgtgctggac
accccactggaccgggaacagcagaaaaagcacgaaatggttttgactgcctttgacggt
gggtcaccggaacgctctgggacagcactgataactattacagtgttagacgcaaacgat
aacgtgcccgtatttgaccgatcagtgtaccgggcgagtctggtggagaacgcaccaagg
gggactctggtgctgaagctgaacgccacagacctggatgagggctcgaatggggaggtg
acctacgcgtttagcgggcacgcacccctcaaggtgcgcgaactgttcagcgtggacccg
tacacgggtgaaatccgagtgaagggcattgtggactatgagaaagccagcgtatatgag
ctgtatgtgcaggcaaaagacaggggaccgtcggctgtggctgtacacagcaaagtgctg
gtagacatcctagatgtgaatgacaacgcgcccgaagtcatcctcacatcagtgtccact
cctgtccaagaagacgcgccaccgggcacggtgatagctgttatcagtgtaatggatcgg
gactcgggagagaacggaaacgttgactgccagattccgagcaacgtcccctttcagctc
cattcatcttttaaaaactattatactctggttacaagcgagtttctggacagggaaact
gtgtcagagtacaacatcactctcacagcccgagatttgggctctccttcgctctctacc
aggaaaactatccttgttcaagtatcagacattaatgacaaccccccgcgattctctcaa
ccttcatacacagtttatgtgaccgagaataatgccccgggcgcttccatttgctctgta
acagcattcgaccccgattctaatcagaacgcctatctgtcttattctattctcgagggt
cagattcagggcatgcccgtgtccacttatgtctcaatcaactctgacaatggcaatatc
tacgcactgcgctcttttgattatgagcaacttagaaactttcagattctggtacaggcg
caggacgctggttttccccctctcgccagtaatataacagtcaacgtctttgtcttggac
cagaacgacaatgcacctgttattgtatccccgctgcctaaaaacggcaccgtggccaca
gaggtggttccgcggtcagtagatgctgggtatctggttaccaaaataacagcgttagac
gcggacgcagggcaaaactcccggctgtcctatcaggtgttgcaggctacagacccaggg
ctgttcagtgtggcgctgtacacgggcgaaatcaggactattcgccggctagtggaaaaa
gacgcaacaaggcaaagactggtaatattagtcaaggacaatgggcaaccgccgctctcc
gccacggtctccattgtcctcacagtggtggacagcgtgcctgagtcgctgtcagatttc
ggagacctcacactcagcccacagcccgcctcaaacctcgctctctacttgatcgtgtca
ctgagcacaatatctttaatattccttgtggctattatcgtgctggctgtggtcaagtgc
tacaaggacagggagaccatcagcgggtacaacctccccccgttcgcctgctgctgctgc
ggggggtttcagcccgatccgcctccggaggtgttcaaaaaatccaacctcaacctgcag
atttcatccgcggccaaagtgcccacgaactgtatggaggtgaatggaaacagcagtctc
tctcagtcatattgttataaagtctgcctgactcccgaatctgccaaaagtgactttatg
tttctgaagccgtgcagccccggcagcacgccgaggaacaacgaagcgaagagcgcagaa
aactcgtggaacgcgcaaagccggagcgcatctgtgaacaacggagcaactactcccaat
gagctgaagcagccaaacacagactggactctcacaaagaatcaaaactcctccattaaa
agttataactctatcaacatggatggcaccctcatgcgtaaggcaatgcatgcagaccca
gaaaactatgtcacgtccatggggcctggacagtactggacttggggtactcacatgaga
gggatgaaagactataagatgtctccttcaaccagtggggtcccctctcgcccctggact
cctcggtgcacacctcctccacaacagcagcagccatcaatcccaccccaccctcacccg
catcctcccccacacccaccacctgactaccaccacaacgtgtacatccctgggacacca
tcaggattttgcaccctgaggcctgcagcaccccgaagcgagctggatgtccacaattcc
ttctctacctttggcaagaagcgacgtcttcagatgtccccccagggagaggctgcgatt
ataaataatgacctgtacaatgactga
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