Perca flavescens (yellow perch): 114562885
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Entry
114562885 CDS
T07494
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2-like isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflv04131
]
114562885
Membrane trafficking [BR:
pflv04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
114562885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_8
TPR_2
TPR_1
SH3_2
SH3_9
SH3_1
TPR_MalT
TPR_10
TPR_7
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
114562885
NCBI-ProteinID:
XP_028445355
LinkDB
All DBs
Position
10:37505261..37529721
Genome browser
AA seq
1570 aa
AA seq
DB search
MALISGSCRLLGQMASCCCRPLLNSSCCGPFIKVCLSSFTDISPAELDALWREPPYALGG
ANEHFSGNDIMTEGVVEEEDGPVVESGAGGVEPDSYWKKREAFLRGSTVTLGEKFSSEIV
LLFTGRRRSSVDPDRALQEALRTRLRVVESNSQDVIQLFKDLSARLVSVHAEKDSFVLTF
KTVEEIWKFSTYLALGYVARCLENFLCDQSFWLDPELLSDLQINVTVDEEHLATLYLGLL
LQEGSFFAKALFTRSEQDEDDEEQLSFKKNDLLMVRDTGQDDMWEGTLLSTGNHGLVPVN
AMQPLPYPFYQWFLRKYPGNVGCSPAEKEPFEHAIVMGSCVAVVDYSPVGPDELLLSQGD
IVEIQGLLVRGLDMFIGTHTSTGHNGFVHKAHVKPLDTVPLDIQLVFLTEKERASLAQVN
PCSSEPSDSGLLERLFSSDISSVYRLDRLDETDFMYIRNRPKHDHKIAASARQSIMSEKS
GGTPPYHSSPRASLSHSSPRLSLYQSHNPLPREGERLSFTLDDTFRELDEFQEDPPLFLE
ENSWEGEDSEFSDPTLTLLNHEHFQEDLLPLYDLQYSFLWVNFSGKTEDELPGHLESVRE
CAKRMGLHWAHRRACFLLGRLCARKLKFSQARVYYEEALSVRVDSFSDTPLLVALFTNLT
AVYLKQRMTDKLPQTLEKAGALLLCLPCHTFTSTDEVELLQLLLRRSVVMGDKHLEARVC
YLISSLFLLLRKTDDALPFVERLQFLSRTLSAAEGLPIVPLDLNWLLSWLYHRKYMPYLA
LASLSLDSRQDHSLHDAFLRIELFIRNSVRLNPCWKEGTSLLPAQIVIYLQQALIIAKQG
EDMKTQRDLCQGLATVYQQYGALDEAVHCAQQAVETGGHIIEEEGFEASVLLGWLLVLTG
QAERAQSVLQPLLTSLQGTDSPTQRGVIHNLLALCLRRQGRIPEAGWNLHSALVISRESG
HQRNQALALANLGCLALDVGASLVAERFLVRSLHLFLELWESPTDEEHVQAYLWLGRSYK
DRRKSQDSRACYEMGLLIALHARNLHSQMVVAKVLSRLYADLMLYGQSIVYYELCVSVSR
ELKDKRLEGEYLEILSSVYLSLNTERSSRKSLDYTKQSLRISIDLGKREEESETWLQVGR
IYYLIQEDELADMYLQAAVKTALRMNDHHFVMSIYEEAGDVYFKGLRNRMASLPFYRDGS
LPFARSIKDIHSEFRLLSKLTELLMKQGEQDEALQYANLAVEIASKTAVQLNERTAYHRL
ATVYYSLQQYEMAENYYLKSLSLCPPVLQDPMEARYYTKVYCRLGNLTLHKLKDSFDAVG
YFQLALAAAVEDQANPEALYVVYMKLAEIHGNHMPDAQLCQVYRDRAQSLKRLLAGQEGG
AVGEENMEDADTEPGQKKEEDSDADMEHRPTESLVKKTTENETCEDNSIPRTCIIHGDTE
DRCADTNIGDVNRKEDHNTNLDTDGPFMNAFGSETETIASQSYSDSILTESFDTAKEDIS
DSSSSTDTLQTYQNQTDGKDFDTDHGMPSPIPDNYTSDITRHTDAQNTDSDIQDGQNTTA
KETDVHADPL
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atggcattgatctctgggagctgccggctcttgggccagatggcgtcttgttgctgcaga
ccgctgctcaactcctcctgctgtggacccttcatcaaagtctgcctctcctccttcaca
gacatctctcctgctgagctggatgctctttggagggaaccaccatatgctctcggggga
gcaaatgaacacttctcaggaaatgacatcatgactgaaggtgttgttgaggaggaggac
ggtccggtggtggagtcaggtgcaggaggggtggagcctgacagctactggaagaaaaga
gaggccttcctcagaggaagtactgtcacactgggagagaaattctcctcagaaattgtg
ctgctgttcaccgggcggaggcgctccagcgtggatcctgaccgggccctacaggaggca
ctgcgcacccgactgcgggtggtggagagcaacagccaggacgtcatccagctctttaaa
gacttgtctgcacgtctggtgtctgtccacgctgagaaggatagcttcgtactcacattc
aagactgtggaggaaatctggaagttttcaacttacctagcattaggttatgttgctcgc
tgcttggagaacttcctgtgcgatcagtccttctggctggacccagagctgctcagtgac
ctgcagatcaatgtaactgtggacgaggaacatttggccaccctttacctgggactgtta
ctccaggagggatctttctttgcaaaggcgctattcacaagaagtgagcaggatgaggac
gacgaagaacagctgtcattcaaaaagaatgacttgctgatggtgagggacacagggcag
gacgacatgtgggagggcaccctgctctccacaggaaaccatggcctggtgccagtcaac
gccatgcaaccgctgccttaccccttctatcagtggttcctgaggaagtacccaggcaat
gttggatgttcgccagcagaaaaggaaccgtttgaacatgctattgtgatgggttcctgt
gtagcagtggtcgactacagtccagtgggccccgatgagcttctgctgagtcaaggggac
attgtggagatccagggtctgctagtccgaggccttgacatgttcataggaacacacact
tccacagggcataatggtttcgtacacaaggcccatgtcaaacctctggacaccgtaccc
ctagacatacagttggtctttctgactgagaaggagagagccagcctggctcaggttaac
ccgtgtagctctgagccaagtgacagtggcctgctggaaagactcttctcgtctgacatc
agctctgtgtacaggctagacagactggatgagactgatttcatgtacatcagaaatcgt
ccaaaacatgatcataagattgctgcaagcgcccgtcagagcatcatgtcagagaaaagt
ggagggacacccccgtaccactcctctcctcgagcttctctgtctcactcctcccctcgt
ctgtccctctatcagtcccataatcctctgccacgcgagggagagcgcctttccttcact
ctggatgacacattcagagaactggacgagttccaggaagacccacctctcttcttggag
gagaacagctgggagggggaggactctgagttcagtgaccccacactgaccctgctcaac
catgaacacttccaggaggacttgctgcccctgtacgacctgcagtattccttcctgtgg
gtgaacttcagtggtaagactgaggacgagctgccagggcacctagagagtgtcagggag
tgtgctaagaggatgggcttgcactgggcacatcgacgggcatgcttcctcctgggaaga
ctctgtgcccggaagctaaagttctcccaggcccgtgtgtactatgaggaggctctcagt
gtccgcgtggacagcttctcggacacaccgctcctcgtcgctctcttcacaaacctcacc
gctgtctacctgaagcagcgtatgacagacaagctgccccagactctggagaaggccggt
gccctgctcctctgtctgccctgccacaccttcacctccacggacgaggttgaactgctg
cagctgctcctgaggagatcggtggtgatgggggacaaacacctggaggctcgcgtctgt
tacctcatctccagcctcttcctgctcctcaggaagactgacgacgctcttcccttcgtt
gagcgactgcagtttctctcaaggacgctctctgccgccgagggacttcccatagttcct
ttggacctcaactggcttttgagctggctatatcatcgtaaatacatgccttacttagcc
ctggcctctctgagtctagactcaagacaagaccactccctccacgatgctttcctgagg
attgagttgtttatcaggaactctgttcgcctgaacccgtgctggaaggaaggaacctcc
ctgctccctgcccagattgtgatttaccttcagcaggccctgattatagctaagcaaggg
gaggacatgaagacccagagggacctgtgtcagggcttggccacagtctaccagcagtat
ggtgctctggatgaggcagtgcactgtgctcaacaagctgtggagacaggaggccacatc
attgaggaggagggctttgaggcctctgtgcttctcgggtggctgctggtgttgacgggc
caggctgagagggcccagagtgtcctacagccactgctcacatctctccagggcacagac
agtcccacacagcgaggagtgatccacaacctcttggctttgtgtctgaggcggcagggc
cgcatcccagaggcaggctggaatctccactctgccttggtcatctccagggaaagtgga
caccagaggaaccaggccctggcattggccaacctgggctgcctggcactggatgtgggg
gcatctttggtggcagaacgcttcctggtcagatccctgcatctttttctggagctctgg
gaaagccctacagatgaggagcacgttcaggcctacctttggctggggcggagctacaaa
gacaggaggaagagtcaggacagcagggcgtgttatgaaatggggctacttattgcacta
catgccagaaatttacacagtcagatggtggtggccaaggtgctgagtcggctgtatgct
gacttgatgctgtacggccagagtatcgtctactacgagctctgtgtgtccgtatccaga
gagctgaaggacaagagactggagggagagtatctggaaatcctcagcagcgtctacctc
tcactcaacactgaaagatcatctcgtaaatctctggactacaccaagcagagcctgagg
atttctatagatttgggcaagagagaggaagagtcagagacgtggctgcaggtgggacgc
atctattacctcatccaggaggacgagctagctgacatgtacctgcaggcagcagtgaag
acagccctgaggatgaatgatcatcactttgtcatgagcatctacgaggaggcaggagac
gtctactttaaaggcctcaggaaccgcatggcttcactgcctttctacagggacggcagt
ctgccatttgcacggagcatcaaggatatccattcagagttccgtttgttgagtaaactg
acggagctgttaatgaagcagggagagcaggacgaggctctgcagtacgcaaacctggct
gttgagatcgccagcaaaacagctgtgcagttgaatgagaggacagcctaccaccgactg
gctacagtctactacagcctgcagcagtatgagatggcagaaaactactacctgaagtcc
ctgtccctctgtccgcccgtcctgcaggaccccatggaggctcgctactacaccaaggtg
tactgcagactgggcaatctcactctacacaaactgaaggattcttttgatgcagtgggc
tacttccagttagctctggcagcggccgtggaggaccaagctaaccccgaggctctgtat
gtggtgtacatgaagctggccgagatccacggcaaccacatgcccgatgctcagctgtgc
caagtttacagagacagagctcagagtctgaagagacttctggctggacaggaaggcggt
gctgttggagaggaaaacatggaggatgcagacacagagcctggccaaaagaaggaggag
gactctgatgctgatatggaacataggcctaccgaaagtttggttaagaaaacaactgaa
aatgaaacatgtgaagataactcaattccaagaacttgtataatccatggagatacagag
gatagatgtgccgacactaatattggagatgtgaacaggaaagaagatcacaacactaat
cttgatacagatggcccttttatgaacgcctttggatccgagacagaaaccattgccagt
cagtcgtacagtgacagtattcttactgagtcctttgatacagccaaggaggatatctca
gactccagcagctccactgacacgttacaaacataccagaatcaaacagatgggaaagac
tttgatactgatcacggcatgcccagtccaatacctgataattacaccagtgacatcaca
agacacacagacgcccaaaacacagattctgatattcaggatggacaaaacacaaccgct
aaagaaacagatgtgcatgcagatcctctttaa
DBGET
integrated database retrieval system
