Perca flavescens (yellow perch): 114562996
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Entry
114562996 CDS
T07494
Symbol
ssrp1
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pflv03000
]
114562996 (ssrp1)
03036 Chromosome and associated proteins [BR:
pflv03036
]
114562996 (ssrp1)
Transcription factors [BR:
pflv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
114562996 (ssrp1)
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
114562996 (ssrp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
SSRP1_C
HMG_box_2
HMG_WDHD1
FERM_C1_MyoVII
Motif
Other DBs
NCBI-GeneID:
114562996
NCBI-ProteinID:
XP_028445539
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All DBs
Position
10:complement(18290668..18310235)
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AA seq
705 aa
AA seq
DB search
MGDTLEFSDIYQEVKGSWNDGRLRFSKQNVVYKSSKTGKVDSIQAGELNMAQWRRVCLGH
GIKLGTSSGHVYKYDGFRDTDFEKISEFFKANYKVELTEKDMCVKGWNWGTAKFSGPLLS
FEVNDSTAFEVPLSNVSQCATGKNEVTLEFHQNDDTEVSLMEVRFYVPPSQSDERQDPVE
AFAENVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDLSLTLNMSEEDVERRFE
GKLSKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLNIKNRGFKEKKGMKGKIDEYSDSDDDQHDAYLERMKAEGKIREEGNDSEESDGESD
ESFNPGEEDDDIAEEYDSNASASDSSEDGDDSDDASEKKKAKKPKVVKEKKERKPRKEKK
QKETGGPKRPMSAYMLWLNSSRERIKSENPGISITEISKKAGEMWRQLGKDEKEEWDTKA
GEAKRNYEKAKQEFKESGGGATSSSKKESRKSGGKKEEKKRKSASADKDRERGGGNDSFK
SKEFIETSESSSDSDHKSKSKRKKESDDEEEEAVSTPASSEEESD
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgggagacacactggagttcagcgacatttaccaggaagtcaaaggctcctggaatgac
gggcggctgcgtttcagcaagcaaaatgtggtttataagagcagcaagactgggaaggtg
gacagcatccaggctggtgagctcaacatggcccagtggagacgagtgtgtttaggtcac
ggcatcaagctgggcaccagctcaggacatgtctacaaatatgacggcttcagggacacg
gactttgagaagatctctgagtttttcaaggccaactacaaggtggagctgacagagaag
gacatgtgtgtgaagggatggaactggggaacagccaagttctcaggaccgctcttatcc
tttgaagtaaatgacagtacagcattcgaggtcccgctgtccaacgtgtcccagtgcgcc
acaggaaagaatgaagtcactctggagtttcaccagaacgacgacacagaggtctccctc
atggaggtccgattctacgtcccgcccagccagtctgatgaacgacaagaccctgtggag
gcgtttgctgagaatgtgttgtctaaggctgatgtgatccaggccacaggagacgctgtg
tgtattttcaaagagctgcagtgtcttacacccagaggaagatacgacatccgtatctac
ccaactttccttcacctccatggtaagacctttgactacaagattccctataccaccgtc
ctccgtctattcctgctgccacacaaggatcagaggcagatgttctttgtgatcagtctg
gatcctcccatcaagcagggtcagactcgttaccactttctcatcctgctcttctccaag
gaagaggaccttagcctcaccctcaacatgagcgaggaggatgtggagcgccgctttgag
ggcaaactcagtaaaaacatgtccgggtctctgtatgagatggtcagcagggtgatgaag
gcactggtcaaccgcaagatcactgtgcctggaaacttccagggtcactctggagctcag
tgcattacctgctcctacaaggcgtcctcgggcctcctctatcccctggagaggggcttc
atctatgtccacaagccccccgtgcacctgcgctttgaggagatctcctgcgtcaatttc
gcccgaggcaccaccacaacgcgatccttcgactttgagatcgaaaccaagcagggaaat
cagtacaccttcagcagcattgagagagaggagtacggaaaactgtttgactttgttaac
gccaagaagctcaacatcaagaacagagggttcaaagaaaagaagggcatgaagggtaag
attgacgagtacagtgactcggacgacgaccagcacgacgcctacctggagaggatgaag
gctgagggcaagatcagagaggagggcaacgacagcgaggagtcagatggcgaaagcgat
gagtcgtttaaccccggagaagaagatgatgacattgcagaagagtacgacagcaatgcc
tcagcgagcgacagcagcgaagacggggacgatagcgatgacgcgagcgagaagaagaag
gccaagaaacccaaagtggtgaaggagaaaaaagagaggaaaccacgcaaagagaagaag
cagaaagaaaccggcggtcccaagaggccgatgagtgcctacatgctgtggctcaactcc
agccgcgagcgaatcaagtccgagaacccgggcatctccatcacagagatttccaagaag
gccggagagatgtggagacaactaggcaaagacgagaaggaggagtgggacacaaaggct
ggagaggcaaagaggaattatgaaaaagcaaagcaagagttcaaagagagcggcggagga
gcaacctccagttccaaaaaggagagtagaaaatctggaggtaagaaggaggagaagaag
aggaagtctgccagtgcagacaaggacagggagcggggaggaggcaacgacagcttcaaa
agtaaagagttcatcgagaccagcgagagttcatcagactctgaccataagagcaagtcc
aagaggaagaaggaatctgatgatgaggaggaagaggctgtgtccacacctgccagctca
gaggaagagtctgactaa
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