KEGG   Perca flavescens (yellow perch): 114563043
Entry
114563043         CDS       T07494                                 
Symbol
cul4b
Name
(RefSeq) cullin-4B
  KO
K10609  cullin 4
Organism
pflv  Perca flavescens (yellow perch)
Pathway
pflv03420  Nucleotide excision repair
pflv04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pflv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    114563043 (cul4b)
  09124 Replication and repair
   03420 Nucleotide excision repair
    114563043 (cul4b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pflv04121]
    114563043 (cul4b)
   03400 DNA repair and recombination proteins [BR:pflv03400]
    114563043 (cul4b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pflv04147]
    114563043 (cul4b)
Ubiquitin system [BR:pflv04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     114563043 (cul4b)
DNA repair and recombination proteins [BR:pflv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      114563043 (cul4b)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      114563043 (cul4b)
Exosome [BR:pflv04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   114563043 (cul4b)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW
Other DBs
NCBI-GeneID: 114563043
NCBI-ProteinID: XP_028445612
LinkDB
Position
10:complement(14477439..14489532)
AA seq 866 aa
MFPTGLSSPNPPPPPTQEARPAATDVKNDSGNITSPKKRKINGSEREDTSDTISSSPPKT
LNSSSSSSSSSSPCSPTSLHIQKKLRFEDSVDFIGLDVKMAEEAAAASCSNNKSKAVFLP
GGVGHHANGLTKPAGSGTFSNSKPGAAKKLVIKNFKEKPKLPENYTQETWQKLKEAVEAI
QNSTSIKYNLEELYQAVENLCSHKISAKLYKQLRAVCEDHIKAQIDQFREDALDSVLFLK
KIDKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDLKVQSKTI
DGILLLIERERNGEAIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQQ
REVPEYLHHVNKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTATLQKGLTHLLDE
NRIQDLSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVD
HVIDICFMKNEKFVNAMKEAFETFINKRPNKPAELIAKHVDSKLRAGNKEATDEELEKML
DKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEG
MFKDMELSKDIMVQFKQYMQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPPEMVRLQEI
FKTFYLGKHSGRKLQWQSTLGHCVLKAEYKEGKKELQVSLFQTLVLLMFNEGEEFTLEEI
KLATGIEDSELRRTLQSLACGKARVLTKIPKSKDVEDGDKFSCNDDFKHKLFRIKINQIQ
MKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLMSEVYNQLKFPVKPADLK
KRIESLIDRDYMERDKENPNQYNYVA
NT seq 2601 nt   +upstreamnt  +downstreamnt
atgtttccaacaggtttatcttcccctaatcccccaccaccgccaacccaggaggctaga
ccagcggccactgatgtcaaaaacgacagcggtaacattacatctccgaagaagaggaaa
ataaacggctcagagagggaagacacttctgacacgatctcttcctcgcctcctaagacc
ctgaattcctcctcttcttcttcctcctcctcctccccctgctcccccacttcgctgcac
atccagaagaagttaaggtttgaggattcagtggatttcattggactggatgttaaaatg
gctgaggaggctgctgctgcttcgtgctctaataacaaaagcaaagccgtgttcctgccc
ggtggcgtgggacaccatgcaaacggactgacgaagcccgcaggatccggcaccttttcg
aacagtaaacccggtgctgccaagaaactagtcatcaagaacttcaaagaaaagcccaaa
ttgccagagaactacacgcaggagacctggcagaagctgaaggaggcagtggaggccata
cagaacagcacttcaattaagtacaatctagaggagctctatcaggctgttgagaacctg
tgctcccataagatatctgccaaactttacaaacagctgagggccgtgtgtgaagaccac
atcaaggcacaaattgatcaattcagagaggatgccctggacagtgtgcttttcctaaag
aaaattgacaagtgctggcaagatcactgcagacaaatgatcatgattaggagtatattt
ttgtttttggaccgcacctatgttttgcaaaattcaatgctgccatcaatctgggacatg
ggactggagctgttcaggttctacatcatcagtgatctgaaggtccagagtaaaactatc
gacgggattctgctgctcattgagagggagcgaaacggagaggcaatagaccgcagtcta
ctgaggagcctgctgagcatgctctctgacctgcagatttatcaggactcttttgagcaa
cgttttttggaggaaactaatcgactgtacgctgcagagggacagaggctgatgcagcag
agagaggttccagaatatctccatcatgtcaacaagcgcttagaggaggaggctgacaga
gtcatcacatatctggaccagagcacacaaaaaccgctcattgctactgtggagaagcag
ttgctgggtgaacatctcacggctactctgcaaaaagggctgactcacctgctggatgag
aacagaattcaggatctgtctcttctctatcaactcttcagtcgagtgcgaggtggcgtc
caggtcctcctgcagcactggatagagtacataaaggcttttggaagcacaatcgtaatc
aatccagaaaaagacaaaacaatggttcaagagttgctggacttcaaagacaaggtggat
cacgtcatcgacatatgcttcatgaagaacgagaagttcgtcaacgccatgaaggaggct
ttcgaaacattcatcaacaaacggccaaataaacctgcagagctcatagcaaaacatgtg
gattcaaagctaagggcaggaaacaaagaagcaacagatgaagaactggagaagatgctg
gataagatcatgattatttttagattcatctatggaaaagacgtttttgaggccttttat
aaaaaggatctggccaagaggttgctggttggaaaaagcgcctctgtagatgctgaaaaa
tcgatgttgtcaaagctgaagcatgaatgtggagcagcgttcactagcaaactggagggg
atgttcaaggatatggagctttctaaagacatcatggtgcagttcaaacagtatatgcag
tgccaaaacattcctggcaacattgagctgacggtgaacatcctcacgatgggttactgg
ccaacctatgtcccgatggaagtgcacctgcctcctgagatggtgcgactgcaggagatc
ttcaagaccttctacctgggcaaacacagtggcaggaagctgcagtggcagtcaacactc
ggccattgtgtcttaaaagctgaatataaagagggcaagaaggagctgcaggtgtcactt
ttccaaacacttgtgctactgatgtttaacgaaggagaggagttcaccctggaggagatc
aaactggcaacaggaatagaggacagtgaacttcgccggactctgcagtcacttgcatgt
ggaaaagcgcgtgtcctcaccaaaatccccaaaagcaaagatgtggaggacggggataag
ttttcttgcaatgatgacttcaaacacaagctcttcaggatcaaaataaaccagatccag
atgaaagaaacggtggaggagcaagccagtaccacagaaagggtgtttcaggatcgtcag
tatcagatcgatgctgccattgtgcggatcatgaagatgaggaagactctgagccataat
ctcttgatgtctgaagtgtacaaccagcttaaattccccgtcaagcctgctgacttgaag
aagaggatagagtctcttattgacagggactatatggagcgtgacaaggagaaccccaac
cagtacaactatgtggcttaa

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