Perca flavescens (yellow perch): 114563071
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Entry
114563071 CDS
T07494
Symbol
hars
Name
(RefSeq) histidine--tRNA ligase, cytoplasmic isoform X1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
114563071 (hars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pflv01007
]
114563071 (hars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pflv03016
]
114563071 (hars)
Enzymes [BR:
pflv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
114563071 (hars)
Amino acid related enzymes [BR:
pflv01007
]
Aminoacyl-tRNA synthetase
Class II (A)
114563071 (hars)
Transfer RNA biogenesis [BR:
pflv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
114563071 (hars)
Prokaryotic type
114563071 (hars)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
HGTP_anticodon2
tRNA-synt_2
WHEP-TRS
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
114563071
NCBI-ProteinID:
XP_028445654
LinkDB
All DBs
Position
10:complement(25398950..25412444)
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AA seq
520 aa
AA seq
DB search
MLAMFCVRACSGLAGFRTVTRVRSVHSLPGITAAQIDEEVAKLLQLKARIGGDDGKHQFV
LKTAKGTRDYNPKQMAIRERVFNTIIGCFKRHGAETIDTPVFELKETLTGKYGEDSKLIY
DLKDQGGELLSLRYDLTVPFARYLAMNKITNIKRYHIAKVYRRDNPAMTRGRYREFYQCD
FDIAGQYDGMIPDAECLKIVHEILSELDLGDFRIKVNDRRILDGMFAVCGVPDDKFRSIC
STVDKLDKMPWEDVKKEMVNEKGLSEEAADRIGEYVSLQGGMDLAERLLQDQRMSRSKQA
CSGLSDIKLLFSYLQLFQVTDKVVFDLSLARGLDYYTGVIYEAVLTQAGVAPAPAEAQNG
APAEESVSVGSVAGGGRYDGLVGMFDPKGRKVPCVGVSIGIERIFSIMEHKAEASAEKVR
TTEVQVMVASAQKNLLEEKLRLITELWDAGIKAEVMYKKNPKLLSQLQHCEESGIPLVAI
LGEQELKDEVVKLRIVATREEVDISRADLIAEIRKRTSEA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgctggccatgttctgtgttcgtgcgtgctccggtctggcgggctttcggactgtaaca
cgggtccgatctgtgcattctctacctgggatcactgctgcgcagattgatgaagaggta
gccaaactgctgcagctcaaggctcggataggaggagacgatggcaaacatcagtttgtc
ctcaagacggcaaagggaacgagggactacaaccccaagcagatggccatcagagagcga
gtcttcaacaccatcattggctgcttcaaacgccacggagcagagaccatcgacacaccc
gttttcgaactcaaggagacgctgacggggaaatatggagaagattccaagctcatctac
gacctcaaagaccagggaggagagctgctgtccctcagatatgacctcactgtgcccttt
gcccgctacctggccatgaacaagataaccaacatcaagcgctaccacatcgctaaggtg
taccgccgcgacaacccggccatgacccgcggtcgctaccgagagttctaccaatgtgat
tttgacatcgcagggcagtacgacggcatgattccagatgctgagtgtctgaagatcgtc
catgaaatcctcagtgagctggacctcggagacttccgtatcaaggtcaacgacagacgc
atcctcgacgggatgtttgctgtgtgtggcgtcccggatgacaagttccgctccatctgt
tcaacagtggataaactggacaagatgccctgggaggacgtgaagaaggagatggtgaat
gagaagggcttatcggaggaggctgccgaccggatcggagagtacgtcagtttgcagggt
ggcatggacctggccgagcgtctcctgcaggaccagcggatgtctcggagcaagcaggcg
tgctccggcctgtcggacatcaagctgctcttcagctacctgcagctcttccaggtcacg
gacaaggtggtgtttgatctgagtctggcccgcggcctggactactacacaggagtcatt
tacgaggcggtgctgactcaggccggggtggccccggcgcccgccgaggcccagaacgga
gcgccggcagaggagagcgtcagcgtgggcagcgtggcgggcggcgggcgctacgacggc
ctggtgggcatgtttgatcccaaaggcaggaaggtgccgtgtgtcggggtcagcatcggc
atcgagaggatcttctccatcatggagcacaaggctgaggcgtccgcagagaaggtccgg
accacggaggttcaggtgatggtggcgtcggctcagaagaacctgctggaggagaaactc
cgactcatcacggagctctgggacgctggcattaaggcagaggtgatgtataagaagaac
cccaaactgctgagtcagctgcagcactgcgaggagtcggggatcccgctggtggccatc
ctgggagaacaggagctgaaagatgaagtggtcaaactccgcatcgtggccaccagagag
gaggttgatatttccagagcagatctgatagctgagatcaggaagaggacctcggaggcc
tag
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