Perca flavescens (yellow perch): 114563081
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Entry
114563081 CDS
T07494
Name
(RefSeq) protocadherin-1-like isoform X1
KO
K16498
protocadherin delta 1
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
114563081
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pflv01009
]
114563081
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pflv04515
]
114563081
Protein phosphatases and associated proteins [BR:
pflv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114563081
Cell adhesion molecules [BR:
pflv04515
]
Cadherins
Protocadherins
114563081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Fibulin_C
PDGLE
Motif
Other DBs
NCBI-GeneID:
114563081
NCBI-ProteinID:
XP_028445664
LinkDB
All DBs
Position
10:complement(3816868..4072771)
Genome browser
AA seq
1211 aa
AA seq
DB search
MAAPRREVLLFLAVALLVSCGAAPTDILYRVPEEQPPNTLIGSLAADQGLPDTGHLYKLE
VGSPYLRVDGKTGDIYTTDIPIDRETLKDCRNLFEGEKCFLEFEVSITDMVKGISTGPRL
IEGRIEVLDINDNTPQFSSPILTLSIPENTHIGALFSIPMATDRDSGTNGVAEYTLTAGP
DADQLFTLQVAVDSDEKQPQLVVMGNLDREKKDSYDLNIRVVDGGKPARASSALLRVTVT
DQNDNAPKFERSHYEAELPENSPQGHSILQVRANDADTGTNGEIDYSLHQASEAVQRLLR
IDRSTGIIYVKGLVDREEESFLKFFVVAKDRGPNSRSSKVLVNVNVKDQNDNAPAIEIRG
IGLVTHHDGVANISEDMPIGTPVALVQVSDRDEGENAVVTCVVAGDVPFQLRPASESAND
RKRKYFLQTTTLLDYERVKDYRIEIVAVDSGNPALSSTNTLKVQVTDMNDNTPNFSPALL
EVDFPEGNQPGDQVLYVTATDADSGTNAELVYSIIESHATRLFEIEANTGEIRVRNLLDR
EETERYEFRVAAADKGLPSKTGTATVVINVLDRNDNDPKFMLSGYSFSVIENMAPLNPVG
VVTVTDADKGENARVRLFVEPDNGKFVIQNGTGTILSSISFDREKESTYTFRLKAVDAGD
PPRSSYVGVTINVLDENDNAPYVTKPANSSYVYMSPVTPPDTSVEFVKAEDIDSGPNSDL
VYTITGGNPYDLFDISPSSGEIKLTQEFTGKHNGLHRLVVKVSDKGKPPRHTTALVHVFV
NDTKSNVSLIEALVGHSLYTPLDRDIAGDPNYALAQRSNILYGSLAGIAGVILVIVAVVV
IRHRLQKDTKSGYQAGKKESKDLYAPKQGPKNGKGKKSKKGKAPKPAKPLEEDEEASLQK
GLKFNLINDTVNDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQAVQ
DLPATNTFVGTGDNNSTGSDQYSDYSYKANPPKYSSSKQPPHRRVTFSTANQAQDLQDAS
QHSYYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENDLRPLPDV
AMTGNCTHECTEFGHSDSCWMPGEPSPTRKVCKNAPKLSTFVPYQEMDGQEQLMANGSPR
PMTEEPGTGGGGGGAKVANMRFMTPYSSAYPGSGDSSGKDCGMEEIPLSQAVEYRSAATP
GGQTSKREIYL
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgaggcgggaggttctgctgttcctcgcggtcgccctgctggtctcctgc
ggcgcggcgcccactgacatcctgtatcgggttcccgaggagcagccgcccaacacgctg
atcggcagcctggcggcggaccagggcctgcctgacaccggacacctctacaagctggag
gtgggctcgccatacctgcgcgtggacggcaagacgggcgacatctacaccacggacatc
cccatcgaccgagagacgctcaaagactgccgcaacctgttcgaaggcgagaagtgcttc
ctggagttcgaggtgtcgatcaccgacatggtgaaagggatcagcacgggcccgcggctg
atcgagggccgcatcgaggtgctggacatcaacgacaacacgccgcagttctcctcgccg
atcctcacgctgtccatccccgagaacacgcacatcggcgccctcttctccatccccatg
gcgaccgaccgggactccggcaccaacggcgtggccgagtacacgctgaccgcggggccg
gacgccgaccagctcttcacgctgcaggtggccgtggactcggacgagaagcagcctcag
ctggtcgtcatgggcaacctggaccgcgagaagaaggactcgtacgacctgaacatccgc
gtggtggacggagggaagccggcgagggcgagcagcgccctgctgcgggtcaccgtcacc
gaccagaacgacaacgcgcccaagtttgagaggagccactacgaagccgagctgccggag
aacagcccgcagggacactccatcctgcaggtcagagccaacgacgcagacaccggcacc
aacggagagatcgactacagcctccatcaggcgtcggaggccgtccagaggcttctgcgc
atcgatcgctctacaggcatcatctacgtgaagggcctggtggaccgcgaggaggagagc
ttcctcaagttcttcgtggtcgccaaagaccgtgggcccaactccaggagctccaaggtc
ctggtgaacgtcaacgtcaaggaccagaatgacaacgctccggcgatcgagatccgcggc
atcggcttggtgacgcaccacgacggcgttgccaacatctccgaggacatgcccatcggc
acgccggtggcgctggtccaggtgtcggatcgcgacgagggggaaaatgcggtggtgacg
tgcgtggttgccggtgacgtcccgtttcagctgcgacccgccagcgagtcggccaacgat
cggaagaggaaatacttcctgcagacaaccaccctgctggattacgagcgtgtaaaggat
tacaggattgaaatcgtcgctgtggattctgggaacccggccctgtccagcaccaacacc
ctcaaagtgcaggtcacggacatgaacgacaacacgccaaacttttcccccgcgttgctc
gaggtggactttccggagggcaaccaaccgggcgaccaagtcctgtatgtcacggcgaca
gacgcagacagcggcaccaacgcagagctggtctacagcatcatcgagtcccacgccacc
aggctctttgaaatcgaggccaacaccggtgagattcgtgtgaggaacctgctcgaccgg
gaagagacggagcgttacgaattccgtgtggcagcagcggacaagggccttcctagcaaa
accggcaccgctacggtcgtgattaacgttctggaccgcaatgacaatgaccccaagttc
atgctgagcggctacagcttctcagtcatcgagaacatggctccgctcaatcctgtcggc
gtagtgaccgtcactgacgcagataagggcgagaacgcccgagtgaggctgtttgtggaa
ccggataacggcaagtttgtcatccagaacggcacggggacgatcctgtccagcatctcg
ttcgaccgcgagaaggagagcacctacaccttccgcctgaaggccgtggatgccggtgac
ccgcctcgatcctcctacgtgggcgtgacgatcaacgtgctggacgagaacgataacgcg
ccctacgtcaccaaaccggcaaactcctcctacgtatacatgtcgcccgtcactccgcca
gacaccagcgtggagttcgtaaaggcggaggacattgactccggacccaatagtgacctt
gtctacaccatcacaggaggaaacccgtacgacctgttcgacatctcgccgagcagcggc
gagatcaaactgacgcaggagttcaccgggaagcacaacgggctgcaccgcctggtggta
aaggtcagcgataaaggcaaacctccccgccacaccaccgcgctcgtccacgttttcgtc
aacgacaccaagtccaacgtctccctcatcgaagcgctggtcgggcacagcctctacacc
cctctggacagggacattgccggagatcccaactacgcgctggctcagcgcagcaacatc
ctgtacggcagcctcgcgggcatcgccggcgtaattctggtcatcgtggccgtcgtggtc
atccgacaccggctgcagaaggacacaaagagcggttatcaagccggcaagaaggagagc
aaggacctgtatgcgcccaagcaaggccccaaaaacggcaaaggcaaaaagagcaaaaag
ggaaaagctcccaaaccggcgaagccactggaggaagacgaagaggccagcttacagaaa
ggcctcaagttcaacctcatcaacgacaccgtcaacgacagtcccagaatccacctgccc
ctcaactacccgccgggaagccccgacttgggccgccactaccgctccaactcgccccta
ccctccatccagctgcagccgcagtcgccctctgcctccaagaagcaccaggccgtccag
gacctccccgccaccaacaccttcgtgggaacgggcgacaacaactccacgggctccgac
caatactcggattacagctacaaggccaacccgcccaaatacagcagcagcaaacagccc
ccccaccgccgagtgaccttctccacggccaatcaggcgcaggacctgcaggacgcgtcc
cagcacagctactacgacagcggcctggaggagtcggagacgcctagctccaagtcgtcg
tcggggccccggatcgggcccctggcgctgccggaggaccactacgagcggaccacgccc
gacggcagcatcggcgagatggagcacccggagaacgacctcaggccccttcccgacgtg
gcgatgaccggtaactgcacccacgagtgcaccgagttcggccactccgactcctgctgg
atgcccggcgagccttcccccacccgcaaggtgtgcaagaacgcccccaagctctccacc
ttcgtgccttaccaggagatggacgggcaggagcagctgatggccaacggcagccccagg
cccatgacggaggagcccgggacgggtggtggtggtggtggagccaaagtggccaacatg
cgcttcatgacgccctacagcagtgcctacccagggagcggagactcgtccggtaaagac
tgtgggatggaggagatcccgctgagccaggcggtggagtaccgctcggccgctactccg
ggcggccagacctccaagagggagatctacctgtga
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