Perca flavescens (yellow perch): 114563313
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Entry
114563313 CDS
T07494
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv02010
ABC transporters
pflv04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
114563313
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
114563313
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pflv02000
]
114563313
Transporters [BR:
pflv02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
114563313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane_3
R1_ABCA1
ABC_tran
AAA_21
HTH_SB
HTH_29
HTH_23
HTH_38
Sigma70_r4_2
PAX
HTH_28
Fe_dep_repress
Motif
Other DBs
NCBI-GeneID:
114563313
NCBI-ProteinID:
XP_028445959
LinkDB
All DBs
Position
10:complement(1520486..1556587)
Genome browser
AA seq
1383 aa
AA seq
DB search
MKLASRRSRSYSVGPVKTLTFMTVKLSFCVILRTFTVAPHGEELSEHVKERIVSLHRDGL
GYKRIASTLNLSCSTVAKTVQRFNRTGSTHSSRRRGRPKSSLMSVFIQTRGEAGGGVAAH
LECPVCGHFSTSHAHQLTHMASLHPARLDAVTVGRLGNIVTYQSTARLFHCSDCFHTCRD
FTKLYTHIISKHCVDEREEERKSGAEEEEEEEEKDALRGKQREEEGGGKDGLKRKPSSEE
GGEEGGTDKVKRKPSSEEEEEEGGKEAPERKQSEEEQGWIDKQKRKPSSEEEKEEEGGGK
DAPRGKQSKDEGGEDKPKRKPSEEEEEGEEGGTNKLKRKPSSEEEEEGEEGGKEALKRKQ
REEEEGETDKLKRKRNEVAVATGVSGYHCLICGWRTKLKSLVVIHVARKHDIPKKLAVQA
VGAGATAPRNATATATATAAATATEDEEVVVDGLSGEMLKEEMEATARVVRFTHNRFMCL
LCGWKTKLKGNCPQKHHQVTVPKNTFISDDAPGDINMQKLLGALLDAPGFGTRCMEGHPI
PEAPCTMGDDGWRTPEVPESITQLFSSSNWTMDDPSPACVCSCDGNKKMLPDCPAGAGGL
PPPEMKLSATDSLQNLTGRNISDYLVKTYADIIGKSLKNKVWVNEFRYGGFSLGARSTQV
LPPANEVDDAIERIRKIFELQKGAAADRFLDNLSGFINGLDTKNNVKIWFNNKGWHSIGA
FINVMNNGILRANLPPGRDASHYGIRAFNHPLNLTKEQLSQVALVTTSVDVLVSICVIFA
MSFVPASFVVFLIQERVSKAKHMQFISGVQPLLYWVANFIWDMCNYVVPATLVIIIFISF
QQKAYVSSTNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSIS
TFVMELFGNNEIGGINDILKNVLLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPL
EWDMVGKNLFAMAVEGVVFFIITILIQYRFFIKPRPVSTLTKLGPLGEEDEDVARERQRI
VHGLGHGDILELRQLTKVFKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTTTFKMLTGD
TVVTSGEAFLAGKSILREIDVVHQNMGYCPQFDSINELLTGREHLELYAVLRGVPEKEVC
DVAEWGIRKLGLLKYSDKAAGSYSGGNMRKLSTAMALIGAPPVVFLDEPTTGMDPKARRA
LWNCIHSIIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTII
LRVGGPDADLLPVMKFIESELSGSTLKEKHRNMLQYQLPSSLTSLTHIFNILAQNKDTLR
IEDYSVTQTTLDQVFVNFAKDQSDDYHSKDNSVRRRDVAIEVGVLSGNHGDAGGATALGE
SVM
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagcgtctcggcggagccgaagctactcggtgggtccggtcaaaacattaaca
tttatgaccgttaaattatcattctgcgtgattttacggacgttcaccgtggcgcctcat
ggcgaggagctgtccgagcacgtgaaagaaaggatcgtttctctccacagagatggcctg
ggctacaagaggatcgccagcaccctgaacctgagctgcagcaccgtggccaagaccgtg
cagcgcttcaaccggaccggctccacccacagcagccgccgccgcgggcgacccaagagc
agcctgatgtccgtgttcatccagacgcgcggtgaagccggcggcggcgtggcggcccac
ctcgagtgccccgtgtgcggccacttctccacgagccacgcccaccagctgacgcacatg
gcgagcttgcacccggcccgcctggacgccgtgacggtgggtcgcctaggcaacatcgtg
acctatcagagcacggcgcggctcttccactgctcggactgcttccacacgtgccgggac
ttcaccaagctgtacacacacatcatctccaaacactgtgttgacgaaagagaggaggag
aggaagagtggagctgaggaggaagaggaggaagaagagaaggatgctctgagaggaaag
caaagggaagaagaaggaggagggaaagatgggctaaagagaaagccaagtagtgaggaa
ggaggagaagaaggagggacagataaggtaaaaagaaagccaagtagtgaggaagaggag
gaggaaggagggaaagaggctccagaaagaaagcaaagtgaagaagaacaaggatggata
gataagcaaaagagaaagccaagtagtgaggaagagaaggaagaggagggaggagggaag
gatgctccaagaggaaagcaaagtaaagacgaaggaggggaagataagccaaaaagaaag
ccaagtgaggaagaggaggaaggagaagaaggagggacaaataagctaaaaagaaagcca
agtagtgaggaagaggaggaaggagaagaaggagggaaagaggctctaaaaagaaagcaa
agggaggaagaagaaggagaaacagataagctaaagagaaagcgaaacgaggttgccgtg
gcgacgggcgtctccgggtaccactgtctgatctgcggctggaggacgaagctcaagtcc
ctcgtggtcatccacgtggcgcgcaagcacgacatccccaagaagctcgccgtgcaggcc
gtgggcgccggggcaaccgcgcccaggaacgccacggcaacggcgacggcgacggcggct
gccacggcgacggaggacgaggaggtcgtggtggacgggctgagtggagagatgctgaag
gaggagatggaggccaccgccagagtggttcgcttcacacacaaccgcttcatgtgtctc
ctctgtggctggaagaccaagctcaaaggtaactgtccccaaaaacaccatcaggtcaca
gtccccaaaaacaccttcatcagtgatgatgcccccggagacatcaacatgcagaagtta
cttggtgctctgttggacgcgccaggctttgggactcgctgcatggaaggacatcccatc
ccagaggctccgtgtacgatgggcgatgacggctggagaactcccgaggtccctgaaagc
atcacgcagctgttcagctcgtccaactggacgatggacgacccgtctccggcgtgcgtc
tgcagctgcgacggcaacaagaagatgctcccggactgtcccgctggagctggggggctg
ccgccaccagagatgaagctgagcgccaccgactctcttcagaacctgacggggagaaac
atctccgactacctggtgaaaacatacgccgacatcatcggcaaaagtttgaagaacaaa
gtttgggtgaatgaattcaggtacggaggattctcattgggcgccaggagcactcaagtc
ctcccaccggccaatgaggtcgacgacgccattgagcgaatcagaaagatcttcgagtta
caaaagggcgctgctgcagatcgattcctcgacaatttgtccggtttcattaacggtttg
gacacgaagaacaacgtcaagatctggttcaacaacaaaggctggcacagcatcggcgcc
ttcatcaacgtgatgaacaacggcatcctgcgggccaacctgccgccaggccgggacgcc
agtcactacggcatcagagccttcaaccatcctctgaacctcaccaaggagcagctgtca
caggtcgctctggtaacgacctccgtggatgtcctggtgtccatctgtgtgatcttcgcc
atgtccttcgtccctgctagcttcgtggtcttcctcatccaagagcgagtcagcaaagcc
aaacacatgcagttcatcagcggcgtgcagccgctgctctactgggtggccaacttcatc
tgggacatgtgtaactacgtcgtcccagcaacgctggtcatcatcatcttcatcagtttc
caacagaaagcctatgtctcttccaccaacctaccagtgctcgcgctgctgctgcttcta
tacggctggtccatcactcctctgatgtacccggcatcgttcttctttaagatcccgagc
acggcgtacgtcgtcctcaccagcgtcaacatcctgatcggcatcaacgggagcatctcc
accttcgtcatggagctgtttgggaacaatgagatcggaggaatcaacgacatcctgaag
aacgtcctgctcatcttccctcacttctgtctcggccgaggactcatcgacatggtgaag
aaccaggccatggccgacgccctcgagagatttggtgagaaccggttccgctctcctctg
gagtgggacatggtggggaagaacctgttcgccatggctgtggagggagtggtcttcttc
atcatcaccatcctcatccagtacagattcttcatcaaacccaggccggtcagtacactc
accaaactgggccctctgggagaagaggatgaggacgtggcccgagagagacagaggatt
gtccacggcctcggacacggagacatcctggagctgagacagctcaccaaggtgtttaag
aggaaacagaagccagcagtggaccgactgtgtgtggggattcctcctggagagtgtttc
gggctgctgggtgtgaacggagcagggaagacgacaacctttaagatgctgacaggagac
accgtggtgaccagcggggaggccttcctggccgggaagagcatcctgagggagatagat
gtggtccatcagaacatgggttactgtcctcagtttgactcgatcaacgagctgctgaca
ggacgagaacatctggagctgtacgccgtgctgagaggcgtccccgagaaggaagtgtgc
gacgtggctgagtgggggatcaggaagctgggtctgctgaagtattctgacaaagcagca
ggaagctacagcggaggaaacatgaggaagctgtccaccgccatggcgctgatcggagcg
ccgccggtcgtcttcctggacgagccaaccacgggcatggaccctaaagctcgccgtgct
ctctggaactgcatccacagcatcatcaaggagggacgatctgtggtcctcacctcacac
agtatggaggagtgtgaggctctgtgtaccaggatggccatcatggtgaacggcaggttc
agatgtctcggcagtgtccaacacctgaagaacaggttcggggacggctacaccatcatc
ctgcgggtgggggggccggacgccgacctgctccccgtcatgaagttcatcgagagcgag
ctgagcggcagcacgctgaaggagaagcaccgcaacatgctgcagtaccagctgccctcg
tctctcacctcgctcacacacatcttcaacatcctggcccaaaacaaagacacgctgagg
atcgaagactactccgtcacccagactacgctggaccaggtgtttgtgaactttgcgaag
gaccagagtgacgactatcactccaaagacaactcggtgagacggcgagacgtggccatc
gaggtcggtgtgctgagcggtaaccacggagacgctggcggcgccacggcgctgggggag
agcgtcatgtga
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integrated database retrieval system
