Perca flavescens (yellow perch): 114563627
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Entry
114563627 CDS
T07494
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pflv01002
]
114563627
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflv04121
]
114563627
Enzymes [BR:
pflv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
114563627
Peptidases and inhibitors [BR:
pflv01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
114563627
Ubiquitin system [BR:
pflv04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
114563627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Vps23_core
Motif
Other DBs
NCBI-GeneID:
114563627
NCBI-ProteinID:
XP_028446226
LinkDB
All DBs
Position
11:complement(14139125..14185832)
Genome browser
AA seq
2627 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQGQAPDAQSQPPLPQNQTSSPNSSNENSPVSPPDEQGQGDGPP
QLEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKCEACQR
FFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMAT
NPHCKFHIYNGTRPSETVPAGAQLADDELFARPPDPRSPKGWLVDLINKFGTLNGFQMLH
DRFMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIEMVPQFLENLTDEELKKEA
KNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEV
NKVISSVSYYTHRHNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEKILRF
VIKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKSSWTNA
SKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYS
CSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKMKMPINIQT
NLVGQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMETMRQFSKEEQAEFDPQTVR
PGSRYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSK
LMGDEPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMM
DDLELIGLDYLWRVVIQGSDDIASRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRL
KASYDTLCVLDGDKDSINCARQEAIRMVRVLTVLKEYINECDSDYHEERTILPMSRAFRG
KHITLIVRFPNQGRQVDDLDIWSHTNDTIGSVRRGILNRIKANAAHTKIELFIGGEVVDP
ADDRKLIGQLNLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVE
SCLPGVIMSLHLRYISFLWQVADLGCNLNMPLLRDGARVLMKLMPPDNTTVENLRAVCLD
HAKLGENSLSPSLDSRFFGPSPSQVLYLIEVVYALLMPASATLGEDASDFQYNFLKSGGL
PLVLSMLTRNNFLPSADMETRRGAYLNALKIAKLLLTAVGFGHVKAVAEACQPNAEGNIP
VSPINQATHDQALVLQSALQNIPNPASECMLRNVAIRLAQQISDEVTENASKYIPDICVI
RAVQKIVWASGCGTVQLVFSSNEEISKIYEKTNAAKEPDGEDEQVCCEALEVMTLCFALM
PTALDTLSKEKAWQTFIIDLLLHCHSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFT
VLGSTAKERAKHAGDYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRTGE
TGVEETILEGHLGVTKELLAFQTPEKKYYIGCEKGGANLIKELIDDFIFPASNVYLQYMK
SGEFPTEQAIPVCSTPASINAGFELLVALAVGCVRNLKQIVDTLTDMYYLGCETLTEWEY
LPPVGPRPNKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGTDVDDDMSGDEK
QENESNVDPRDEVFSYHHQFDDKPSSKSEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPR
GFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSRVLGGSFADQKICQ
GCPHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLL
IKKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVNPENQ
VIQQNEPSEPTPPGSSKYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDV
TECKMDDEEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDSLDKDSEL
VKYISELTISSTKPHQVKMPGVIECSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCNSVYL
NPPPGQDHLLPEAEEIAMISAQLAARFLFSTGFHTKKVVRGPASDWYDALCILLRHSKNV
RYWFAHKVLFAYPNRFSEYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSPTASPGPST
QGCDNLSLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLNVPAT
FMLVALDEGPGPPIKYQYAELGKLYTVVSQLVRCCDVSSRMQSSINGNPPLPNPYGDPNL
TAPVMPVQQLVAEILFVRTSYVKKIIEDCSNSEETVKLLRFSCWENPQFSSTVLSELLWQ
VAYSYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQKRA
YQCIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNWSP
PVQSNETSNGYFLERSHSARMTLAKACELCPEELKCTQGSPGKEPDEQEAPDDQDSSPPE
DTSLYPHSPGTTQFQQNNHPHGQPYTGPAAQHMNNPPRPGPASAPTPGPTQTTPTPGPGP
TPGPGPRAQENWESTEDVAPAPAPAPTPAPAPAPTTSTTPTPAPPKE
NT seq
7884 nt
NT seq
+upstream
nt +downstream
nt
atgacagccaccacgcgtggctctccggtggggggcaatgacagtcagggccagggccag
gcacctgatgctcagagccaaccccccctgccacagaaccagacatcatccccgaactca
tctaatgagaactctccagtaagcccaccagatgagcagggccagggggatggcccccct
cagctggaagaggaggagcctgccttccctcacactgacctagccaagctggatgatatg
atcaacaggcctcgttgggtcgttccagttttgccaaaaggagagttagaagtcctcttg
gaagctgctattgacctgagtaaaaaaggactggatgtaaagtgtgaggcatgtcagagg
tttttccgagatggtctgaccatctccttcacaaagatcctgacagacgaggcggtcagt
ggctggaagtttgagattcataggtgtatcatcaataacacacaccggttggtggagctg
tgtgtggccaagctctctcaggactggttccctctactggagctgctggccatggccacc
aaccctcactgcaagttccacatttacaacggcacacggccctctgagactgtccccgct
ggagcacagctggctgacgatgagctctttgcccgaccaccagacccacgctctcctaag
ggctggttggtggacttaataaacaaatttggcacgttaaacgggtttcaaatgttgcac
gatcgcttcatgagcggccaagcactgaacgtccagatcatcgctgcacttatcaagcct
tttggccagtgttacgagttcctcacattgcacacggtaaagaagtacttccttccagtc
atcgaaatggttccccagtttctagagaatcttacagatgaggagctaaagaaagaggcc
aagaatgaagccaaaaacgacgcactgtccatgataatcaagtctctgaagaatctggct
tctcgtgtaccagggcaggaggagaccgtgaagaatttagagatttttagattaaaaatg
attcttaggttattgcaaatttcttcttttaatggcaaaatgaatgcactaaatgaagtt
aacaaggtgatctccagtgtgtcctactacactcatcggcataaccctgaagaggaggag
tggctgactgcagagcgcatggcggagtggatccagcagaaccacatcctgtccattgtg
ctgagggacagtttgcaccagccgcagtacgtagagaaactggagaagatccttcgcttt
gttatcaaagaaaaagctcttacaatgcaggatctggacaacatctgggcggcacaggct
ggtaagcatgaggccattgtgaagaatgtccatgacctcctggccaagctggcatgggat
ttctcacctgagcagctcgatcacctttttgactgtttcaagtcaagctggaccaatgcc
agcaagaagcagcgtgaaaaactgctggaacttatccggcgcttggctgaggatgataag
gatggggtgatggcccacaaagtcctcaacctgctgtggaacctggcacacagtgatgat
gtgcctgtagacatcatggaccaggctcttagtgctcacatcaaaatattagattacagt
tgttcacaggacagagacacacagaagattcagtggatagatcgcttcatagaggagcta
cgaaccaatgacaaatgggtgatccctgccctgaagcaaataagagaaatctgtagcctc
tttggagaagcccctcaaaaccttagaaagaaaatgaaaatgccaattaacatacaaacg
aacttagtgggtcaaacccagagaagtcctcatgtgttttaccgccatgacctgatcaac
caactacagcacaaccatgctctggtcacgctggtggctgagaacctctcggcctacatg
gagaccatgaggcagttctccaaagaagaacaagctgagtttgacccccagacggtcaga
ccaggaagccgctacagccatgtacaggaagtgcaggaacgactcaacttcctgaggttc
ctgctaaaagatggccagctgtggctatgtgcccctcaggccaagcagatctggaagtgt
ctggctgagaacgcagtgtttctgtgtgaccgtgaggcctgcttcaaatggtactccaag
ctgatgggtgatgaaccagacctggacccagacatcaataaggacttctttgagaacaac
gttctgcagttggacccatctctgctgacagagaatggcatgaaatgctttgagaggttc
tttaaggctgtcaactgcagggaaggcaagctggtggcaaagcgcagggcctatatgatg
gatgacctggaactaataggcttggactacctctggagggtggtaattcaaggaagtgat
gacatcgccagccgagctatagacctgctgaaagagatctacaccaacctcggaccaaaa
ctgcaagtcaatcaggttgaaattcatgaagatttcatccagtcatgttttgaccgtctg
aaggcgtcctatgacaccctgtgcgtgttggatggagacaaagacagcatcaactgcgcc
cgtcaggaggctatccgcatggtgcgagttcttactgtgctcaaagagtacatcaatgag
tgtgacagtgactaccatgaggagaggactatactgcctatgtcaagagctttccgtggg
aagcatatcacattgatcgtccgtttccccaaccaggggcgtcaggtagatgacttggat
atctggtcacacactaatgatacaatcggctcggttcggcgtggcatcctcaacaggatc
aaagctaatgctgcacataccaagattgagctcttcattggtggggaggttgttgatcca
gctgatgacaggaagctgattggacagctcaatttaaaggacaaaacgctgatcacggcc
aagctgacccaggtgagtgccaacatgccttcaagcccagacagctcttctgactcatcc
actggctctccgggtaaccacggcaaccactacagcgatgggcctaaccctgaggtggag
agctgtcttcctggtgtgattatgtcgctgcatctgcgctacatctccttcctgtggcag
gtggctgacctgggctgcaacctcaacatgccactgcttagagatggagctcgagtttta
atgaaactcatgcccccagataacactactgtagagaatctgcgagctgtgtgtctggac
cacgccaagctcggtgagaacagcctcagtccttcactggactcacgcttcttcggcccc
tcaccctcacaagtgctctacctcattgaggttgtttatgctttgctgatgccagccagt
gcaactctgggcgaagacgccagtgacttccagtacaacttcttgaagagtggtggactg
cccctggtgttgagcatgctcaccaggaacaacttcctcccatcggcagacatggagaca
cggcgtggggcttacctcaatgcacttaagatcgccaagctcctccttactgctgtaggc
tttgggcatgtgaaggctgtggctgaggcctgccagcccaacgctgagggaaatatacct
gtctcaccgattaatcaggccactcatgatcaagccctggtcctccagagtgccctgcaa
aacatccctaaccctgcctcagaatgcatgctgcgcaatgtagccatccgcctggcccag
cagatctccgatgaggtaacagaaaatgcatcgaagtacatcccagacatctgtgtgatc
cgagcagtacagaaaatagtgtgggcatcaggctgtggtacagtgcagctcgtcttcagt
tcaaatgaagaaatcagcaagatatatgagaagacaaatgcagctaaggagccagatggg
gaagatgagcaggtgtgttgcgaggccctggaggtgatgacactgtgttttgccctcatg
cccactgctctggacactctcagtaaggagaaggcttggcagaccttcatcatagacttg
ctgctacactgccacagcaaatctgtgcgtcaaatggcccaggagcagtttttcctgatg
gcaacgaggtgctgtatgggccatcgacccctgcttttctttatcacccttctcttcact
gtgctggggagtacagccaaggagcgagccaaacatgctggagactacttcactttactc
agacatcttctgaactatgcctataacagcaacatcaacctgccaaatgctgaagtcctg
ctcaacaatgagattgactggctgaagcggataagggatgaggttaagaggacaggggag
actggtgtggaggagaccatcctggagggccaccttggggttaccaaagagcttctagcc
ttccaaacaccagagaagaagtattacattggctgcgagaaagggggagcgaaccttatt
aaggagctgattgacgacttcatcttcccagcatctaatgtgtacctgcagtacatgaaa
agtggggagttccccacagagcaggccatccctgtgtgtagcacccctgcttctatcaac
gctggctttgagctcctggtagcactggctgttggatgtgttcgcaacctcaagcaaata
gtagacaccctgactgacatgtactacttaggttgcgagacactgacagagtgggagtac
ttgcctccggtggggccacgccccaacaaaggctttgtaggtttgaagaatgccggggcc
acctgttatatgaactctgtcattcagcagctgtacatgattcctccaatccgcaatggc
atcctggccattgagggcacaggcactgatgtggatgatgacatgtcaggagatgagaag
caggagaatgagagtaatgtagatcctcgtgatgaggtgttcagctaccaccatcagttt
gacgataaaccctccagtaagtcagaggacaggaaagagtacaacattggagtactacgt
cacctacaggtcatttttggacatctggctgcgtccagacttcagtactatgtccccagg
ggattctggaaacagttcagattatggggtgagccagtgaacttgcgggagcagcatgat
gctctggagttttttaactctttggtggacagtctggatgaagctttgaaagccctgggc
caccccgccatgctgagcagggtgctgggagggtccttcgctgaccagaagatctgtcag
ggatgcccccacaggtatgagtgtgaggagtcgttcacaacactcaatgtagatatcaga
aaccaccagaacctgttggactccatggagcagtatgtcaaaggagatctgcttgaggga
gccaatgcctaccactgtgagaagtgtaataagaaggtggacacagtgaagcgcctgctg
ataaagaagctgccacctgtcctggccatccagctgaagcgctttgactatgactgggag
agggagtgtgccatcaagttcaatgactactttgagttccccagggagctagacatggag
ccgtacacggtagctggtgtggccaagctggagggcgatgacgtcaacccggagaaccag
gtgatccaacagaatgagccctctgaacccacacctcccggaagttccaagtatcgtctg
gtgggagtgctggtccactcaggccaggccagtggcgggcactactattcctacataatc
cagaggaacggaggtgatggggagaagaaccgctggtataagtttgatgatggtgatgtg
actgagtgcaagatggacgatgaggaggagatgaagaaccagtgctttggaggggaatac
atgggcgaggtgttcgatcatatgatgaaaaggatgtcgtaccggaggcagaagcgctgg
tggaatgcctacatcctattctatgagcgtatggactctttggacaaggacagcgagctt
gtcaaatacatctcggagttgaccatctcctccaccaagccgcatcaggtcaagatgcct
ggtgtcatcgagtgcagcgtccgcaagcagaacgtccaattcatgcacaaccgaatgcaa
tacagcctggaatatttccagttcattaagaaacttctgacctgtaacagtgtctattta
aaccctcctccaggacaagaccatcttctgccagaggcagaggagattgctatgataagc
gctcagctggctgctaggttcctcttcagcacaggttttcacaccaagaaagtagtacga
ggtcctgccagtgactggtatgacgccctctgcatcctgctgagacacagtaagaatgta
cgctattggtttgcacacaaagtcctgtttgcttaccctaaccggttctcagagtacctg
cttgagtgcccgagcgctgaggtccgtggtgcatttgccaagctcattgtcttcattgct
cacttctccctgcaagatggcccatgcccctcccccaccgcctcgcctggaccctctact
cagggctgtgataacctcagtctaagtgaccacctgttgagagctgtgctcaacctgctc
agaagagaggtttctgaacatggccgtcacctgcagcagtactttaacctctttgtcatg
tatgccaatctgggcctggcagaaaagacccagctgttaaagctgaatgtccctgccact
ttcatgttggtcgctctggacgagggtcccggccctcccattaagtatcagtacgctgag
ctgggcaagctctacactgtagtctcccagctggtccgttgctgtgacgtctcctcacgc
atgcagtcctcaatcaatggtaaccctcctctccctaacccgtatggtgaccccaacctg
acggccccagtgatgcctgtgcaacagctggtagcagaaatcctgtttgtgaggaccagt
tacgtgaagaagataatcgaggactgcagcaactctgaggagacggtgaagctgcttcgc
ttcagctgctgggagaaccctcagttctcctccactgtgctcagtgagctgctctggcag
gtggcgtactcttacacctatgagctgaggccttacctggacttgctgctacagatccta
ctcatcgaggactcctggcagacacacaggattcacaatgtgctgaagggcattcccgat
gacagagatgggctctttgacaccatccagcgctccaagaaccactaccagaaacgagcc
taccagtgcattaagtgcatggtggccctcttcagcaactgctccgtggcctaccagatc
ctacagagtaatggtgacctgaaaagaaagtggacgtgggcagtggagtggttaggggac
gagctggagaggaggccatacacggggaacccccagtacacctacaacaactggtcccct
ccggttcagagcaatgagacctccaacggctatttcctggagcgttcacacagcgcacgt
atgacccttgccaaggcctgtgaactttgtcccgaggagctcaagtgtactcagggaagc
ccagggaaggagccagatgaacaggaagcacctgatgatcaagactcttccccacccgaa
gacacctctctgtacccccactctcctggaaccacacaatttcagcagaacaaccacccc
catgggcagccgtacaccgggcctgctgctcagcacatgaacaaccctccgcgtcctggt
cctgcgtctgccccgactccaggcccgacccagaccacccccaccccaggccctggtccc
actcctggcccaggcccgcgagcacaagagaactgggagagcaccgaggacgtcgcccct
gcccctgcccccgccccgacccctgccccagcccccgcgcccaccacctctactacccca
acgcctgccccgcctaaggagtaa
DBGET
integrated database retrieval system
