Perca flavescens (yellow perch): 114563702
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Entry
114563702 CDS
T07494
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114563702 (hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflv03019
]
114563702 (hspd1)
03110 Chaperones and folding catalysts [BR:
pflv03110
]
114563702 (hspd1)
03029 Mitochondrial biogenesis [BR:
pflv03029
]
114563702 (hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pflv04147
]
114563702 (hspd1)
Enzymes [BR:
pflv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
114563702 (hspd1)
Messenger RNA biogenesis [BR:
pflv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
114563702 (hspd1)
Chaperones and folding catalysts [BR:
pflv03110
]
Heat shock proteins
HSP60 / Chaperonin
114563702 (hspd1)
Mitochondrial biogenesis [BR:
pflv03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
114563702 (hspd1)
Exosome [BR:
pflv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
114563702 (hspd1)
Exosomal proteins of other body fluids (saliva and urine)
114563702 (hspd1)
Exosomal proteins of breast cancer cells
114563702 (hspd1)
Exosomal proteins of colorectal cancer cells
114563702 (hspd1)
Exosomal proteins of bladder cancer cells
114563702 (hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
114563702
NCBI-ProteinID:
XP_028446296
LinkDB
All DBs
Position
11:8606893..8616871
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AA seq
575 aa
AA seq
DB search
MFRLPTIMKQVRPVCRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
NVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDTISKGANPVEIRRGVMMAVETVIKELKNLSKPVTTPEEIAQVATISANGDV
EIGTLISNAMKKVGRKGVITVKDGKTLHDELEIIEGMKFDRGYISPYFINTAKGQKVEFQ
DAYLLLSEKKISSVQSIVPALEIANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLRDMAVATGGTVFGDDAVGLALEDIQAHDFGKIGEVQITKDDTLLLRG
GGSPAEVEKRAAEIVEMLESTTSDYEKEKLNERLAKLSDGVAVLKIGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRCIPSLDTVKTVNADQKIGVEIIRRALRIPAMTIA
KNAGVEGSLVVETILRGSAELGYDAMLGEYVNMVEKGIIDPTKVVRTALMDAAGVASLLS
TAECVVTELPKEEKEMPAGGMGGMGGMGGMGGMGF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtttaccaaccatcatgaagcaggtgaggcctgtgtgccgggcgctggcgcct
cacctcacacgagcctacgctaaggatgtgaagtttggagcggatgctcgtgccctaatg
ctgcagggagtggacctgctggctgacgctgtggctgtcaccatgggcccaaagggtcgc
aatgtcatcatcgagcagagctggggcagccccaaggtcaccaaggacggcgtgacggtg
gccaagagcatcgacctgaaggacaagtacaagaacatcggtgccaagctggtgcaggac
gtggccaacaacaccaacgaggaggccggtgacggcaccaccaccgccacagtgctggct
cgggccatcgccaaggagggcttcgacaccatcagcaaaggcgccaaccccgtggagatc
cgccggggggtcatgatggccgtagaaaccgtcatcaaagagctgaaaaatctctccaag
ccagtcacgacccccgaggagatcgcacaggttgctacaatctcagccaatggagacgtg
gagattggtaccctaatttccaacgccatgaagaaagtcggccgcaagggagtcatcacc
gtcaaggatgggaagaccctgcacgatgagctggagatcattgagggcatgaagtttgac
cgtggttacatctccccttacttcatcaacactgccaaaggtcagaaggttgagttccag
gacgcctacctgctgctgagcgagaagaagatctccagcgtccagagcatcgttccagcc
ctggagatcgccaaccagcaccgcaaaccgctggttattgtggctgaggatgtggacgga
gaggccctcagcaccttggttctcaacaggctcaaggtggggcttcaggtggtggctgtt
aaagctccaggatttggagacaacaggaagaatcagctaagagacatggccgtcgccacc
gggggcactgtgtttggagatgacgcagtaggtctggctcttgaagacatccaggctcac
gactttggcaagatcggtgaggtgcagattaccaaagatgacaccttgctgctgagggga
ggcggcagccccgcggaggtcgagaagcgtgcggcagagatcgtcgagatgctggagagc
accaccagtgactacgagaaggagaagctcaacgagaggctggccaagctgtccgacgga
gtggcggtgctcaagatcggaggaacgagtgacgtggaggtgaacgagaagaaggaccgc
gtgacagacgctctgaacgccacacgggctgcggtggaggagggcatcgtgccaggcggg
ggctgcgccctgctgcgctgcatcccaagccttgacaccgtcaaaactgtcaatgctgac
cagaagataggtgtggagatcatcagacgggcgctccgtatccccgccatgaccatcgct
aagaatgcgggtgtggagggttcactagtggtggagacgatcctgcgggggtcagctgag
ctcggctacgacgccatgctgggagagtacgtcaacatggtggagaagggcatcatcgac
cccaccaaggtggtgagaacggccctgatggacgccgcaggagtcgcctccctgctctcc
actgccgagtgcgtcgtcacggagctacccaaggaggagaaggagatgccagcggggggc
atgggcggcatggggggcatgggcggtatggggggcatgggtttctaa
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