Perca flavescens (yellow perch): 114563723
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Entry
114563723 CDS
T07494
Symbol
sf3b1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114563723 (sf3b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pflv03041
]
114563723 (sf3b1)
03036 Chromosome and associated proteins [BR:
pflv03036
]
114563723 (sf3b1)
Spliceosome [BR:
pflv03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
114563723 (sf3b1)
Complex B
114563723 (sf3b1)
Complex C
U2 SnRNP specific factors
114563723 (sf3b1)
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
114563723 (sf3b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Menin
Adaptin_N
UNC45-central
GST_N_4
DUF2298
Motif
Other DBs
NCBI-GeneID:
114563723
NCBI-ProteinID:
XP_028446328
LinkDB
All DBs
Position
11:8633650..8650580
Genome browser
AA seq
1324 aa
AA seq
DB search
MAKIAKTHEDIEAQILEIQGMKATLLEEGDQGVGLDSTGFYDQEIYGGSDSRFAGYVTSI
AANEQEEDDEEDSTTSLLGQKKPGYHAPVAILNAIPQSDEQYDPFAEHRPPKIAEREDEY
KARRRQMIISPERLDPFADGGKTPDPKLQVRSYVDVMLEQNLSKEEREIRQQLVEKAKSG
DLKAVNGSAASQAAAAAAAKRKRRWDQTADQTPTTGNTTPKKISTWDQADSSSETPGHTP
GHTPAHTPSSTRWDETPGRPKGSETPGATPSTRMWDPTPSHTPAGAATPGRDTPGHATPG
HGGATGSVRKNRWDETPKTERETPGHGSGWAETPRTDRGDESVGETPTPGASKRKSRWDE
TPASQMGSSTPLLTPGKTPIGTPAMNMATPTPGHLMSMTPEQLQAWRWEREIDERNRPLT
DDELDAMFPEGYKVLPPPAGYVPIRTPARKLSATPTPIGGMTGFHMQVEDRTTKQMNDQP
SGNLPFLKPDDIQYFDKLLVEVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQIT
DKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEP
LLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALG
IPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQK
VRTISALAIAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAE
YANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQ
HRMALDRRNYRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLG
AADIDHKLEEQLIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRL
NNKSAKVRQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAI
VNVIGMHKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICF
ELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVA
ETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDR
DLVHRQTASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVA
IGPCRMLQYCLQGLFHPARKVRDVYWKIYNSIYIGSQDALIAHYPQVYNDEKNMYVRYEL
DYVL
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgccaaaacgcacgaagacatcgaggcccagatcctggagatccagggg
atgaaggctaccctgctggaggagggagatcagggggtgggcctggactccactggcttt
tatgaccaggagatctacggaggcagcgacagccgttttgctggttatgtcacttcaatc
gctgccaatgaacaggaggaagatgatgaagaggattcaacaacaagcttattgggacaa
aagaagccagggtaccatgcaccagtggcgatactcaatgccattcctcagtcagacgag
caatacgacccgtttgcagagcatcgtccaccaaagatcgcagagcgggaagatgaatac
aaagcccggcgcagacagatgatcatctcacctgagcgtctcgacccttttgcagatggg
ggcaaaacgccggaccccaagctgcaagtcaggtcgtacgtggacgtcatgttggagcag
aacctgtcaaaagaggagagagagattcgtcagcagctggtagagaaggccaaatctggg
gacctgaaagctgtcaacgggtccgctgcctcacaagctgccgccgccgccgccgcaaaa
cgtaagcgccgctgggaccagacagctgaccaaaccccaactaccggtaatactacaccc
aaaaagatttccacctgggaccaggccgactcgtcttctgagactcctggacacacccca
ggacacacccccgcacacacgccttccagcacccgatgggatgaaacccctggccgccct
aaaggcagcgagaccccgggggccactcccagtacccgcatgtgggaccccactcccagt
cacacacctgctggcgccgccacccctggcagggacacgcccggccatgccacgcctggt
cacggtggagccacaggaagcgtacgcaagaaccgctgggacgaaaccccgaagacagaa
agggagaccccgggacacgggagtggctgggccgaaacgccacgcacagaccgaggagac
gagtccgtgggcgagactccgaccccaggggccagtaagaggaagtctcggtgggatgaa
acccctgccagtcagatgggctcctcaacaccgctacttaccccgggaaaaacacccata
ggcacgccagctatgaacatggctaccccaacaccaggtcacctgatgagcatgacccca
gagcagctgcaggcgtggaggtgggagagggagattgatgagaggaaccggcctctcaca
gacgacgagcttgacgccatgttcccagagggatacaaggtcttgcctcccccagcaggc
tacgtgccgatccgaactccggcccgtaagctgtcggccacgcctacgcccattggaggc
atgacaggcttccacatgcaagtggaggaccgcaccacgaaacagatgaatgaccagccc
tccggaaacctccccttcctcaaaccggatgacatccagtattttgacaaactgctggtt
gaggtggacgaatccacgctgagccctgaggagcagaaagagagaaagatcatgaagttg
ctgctgaaaattaaaaatggaacaccgcccatgagaaaggccgctctgcgtcagatcaca
gataaagctcgtgaatttggagcaggccccctgttcaatcagatcctgccattactcatg
tcgcccaccctggaggaccaggagcgccatctgctggttaaagtcattgaccgcattctc
tacaaactggatgacctggttcgaccatacgtacacaagatcctggtggtgattgagccc
ctgctgattgatgaggactactatgccagagtagaaggcagagaaatcatctccaacttg
gcaaaggcggccggtctggctacgatgatctccacaatgcgacccgatattgacaacatg
gacgagtacgtcagaaacaccacagcccgagccttcgccgtggtggcctctgctctcggt
attccctctctcctgccgtttctcaaagcggtgtgtaaaagcaagaagtcctggcaggcc
aggcacacgggcatcaagatcgtgcagcagatcgccatcctcatgggctgcgccattctg
cctcacctgcgcagcttggtggagatcatcgaacacggtctggtggatgagcagcagaag
gtgaggaccatcagtgccctggctatagccgccctcgctgaagctgctacgccctacggt
atcgagtcctttgactcggtcctcaagccgctctggaagggtatcagacagcacagagga
aagggtctggctgctttcctgaaagctatcggttacctgatcccactgatggacgccgag
tatgcaaactactacaccagagaggtgatgcttatcctcatcagagagttccagtcccct
gatgaggagatgaagaagattgtactcaaggtggtgaagcagtgttgtggcacggacggt
gtggaagccaactacattaagaccgagatcctgccccccttcttcaagcacttctggcag
cacaggatggctctggacagacgcaactacagacagttggtggacaccacagtggagctg
gccaacaaagtgggagcagcagagatcatttctcgcatcgttgacgacctgaaagacgag
gcagagcagtacagaaagatggtgatggagaccatcgagaagatcatgggcaacctgggt
gcagctgacatcgaccacaagctggaggagcagttgatcgacggtatcctgtatgccttc
caggaacagacgaccgaggactccgtgatgcttaatggtttcggcacagtggtgaacgcc
ctcgggaagcgcgtgaaaccctacctgcctcagatctgcggtacggtgctgtggcgtctc
aacaacaagtccgccaaagtccgtcagcaggctgccgacctgatctcccgcacggccgtg
gtcatgaagacttgccaggaggagaagctgatgggtcacttgggtgtggtgctgtacgag
tacctgggagaggagtacccggaggtgttgggtagcatcctaggagcattgaaggccatc
gttaatgtcatcggtatgcacaagatgactccgccaatcaaagacctgcttcctcgtttg
actcccatcctgaagaacagacacgagaaggtgcaggagaactgtatcgacctggtgggc
aggatcgctgacaggggtgctgaatatgtgtcggccagggagtggatgaggatttgtttc
gaactgctggagctgctgaaggctcacaaaaaggccatccgcagagctacggtcaacacg
tttggttacatcgccaaagccatcggcccccacgatgtcttggccacactgctcaataac
ctgaaggtccaggagcgtcagaaccgagtatgcacgactgtggccatcgccatcgtcgcc
gagacctgttcgccgttcactgtgctgccggcgctcatgaacgaataccgcgtgcctgag
ctcaacgtgcagaacggcgtgctcaagtccctctccttcctgttcgagtacatcggagag
atgggcaaggactacatctacgccgtcacaccgctgctggaggacgcgctcatggaccga
gacctggtccaccgacagacagccagcgccgtggtccagcacatgtctctgggcgtctac
ggtttcggctgtgaagactccctcaaccacttgcttaactacgtgtggcccaacgtgttt
gagacctcgcctcatgtcatccaggcggtcatgggcgccctggaggggttgagggtcgcc
atcgggccctgccgcatgctgcagtactgcttacagggcttgttccatccagccaggaag
gtgcgagacgtctactggaagatttacaactccatctacatcggctcgcaggacgccctc
atcgctcactacccacaagtctacaacgacgagaaaaacatgtatgtccgctacgaacta
gattacgtcttgtaa
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integrated database retrieval system
