Perca flavescens (yellow perch): 114563801
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Entry
114563801 CDS
T07494
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
114563801 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pflv03400
]
114563801 (xrcc5)
DNA repair and recombination proteins [BR:
pflv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
114563801 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
DUF6005
VWA
Motif
Other DBs
NCBI-GeneID:
114563801
NCBI-ProteinID:
XP_028446479
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All DBs
Position
11:complement(22862934..22870559)
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AA seq
722 aa
AA seq
DB search
MAGAKSALVLCMDVGFSMSNSAPGEEPPFEFAKKVIQKFVQRQVFAETKDELALVLFGTD
STKNSLDKDDQYQNITVHRHLMVPDFELLEEIQNQIHPESQQADWLDALVVCMDLLKTET
KEKKCDRLNIVLLTDLNTEANSEQLDVIIENLKQAGINLQFFLPFPAGDDEEGGGDADGR
DPGQPGTGKGLSKEQKSGLDMVKHIMLSLDEEDGLGEIYSFRKAIEQLCMFKRIERKPMA
WPCQLTIGSCLPIRIVGYKAVTEEKLKKTWTTVDAQTNQKDDVKRETVYCLDDDNETEVQ
KDDTIQGFRYGSDIVPFSKVDQDQMKYKHDGKCFAVLGFSKQSMLQRHQFMGTQVIKIFS
AKDDEHAGVALSALIRALDELNMVAIVRYAYDRRSNPQVGAAFPCIKQDYECLMYVQLPF
MEDLRQFTFPSLANNKKFTPSDTQLSAVDSLIDSMMLVEGDDQKDMFKVHHIPNPAFQRH
FQCLHHRAVNPGTPLPPMEPWLKAALECPDVISERCQAPLEEIKRKFPLTEVEKKKKLKT
SAQIFGKDSEEPDAKKAKGDEEEEEYSLADIAEGSVTSVGSVDPARDFRTLIRKKSLPFG
EVCQQLTRRIEQLLSNKNTHYYMKSITCIQAFREQSVKLGDANLYNGYLQSLKRSIPNRG
LEVFWDLLVQDAITLISKDEVEGSTVSKNEANQFLVTEEKKEEAAAPQAEDTGDVDDLLD
MM
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtgccaaatcagcattggtgttgtgcatggatgttgggttctccatgtccaac
tctgccccgggcgaagagcctccctttgaatttgccaaaaaagtaatccagaagtttgtc
cagcgccaggtttttgcagagaccaaggatgagctggcgttagttctgtttgggacagac
tccaccaagaactcactggacaaggatgaccagtaccagaacatcactgtgcatcgtcac
cttatggtgcctgattttgagctcctggaggaaatacaaaatcagatccatccagagagt
cagcaggctgattggctggatgctcttgttgtgtgtatggatcttctcaagactgaaaca
aaggaaaagaagtgtgatcgtctcaacattgtcctcttgactgacctgaacactgaggcc
aactcagagcagctggacgttattattgaaaacctgaaacaagctggcatcaacctgcag
ttttttttgcctttccctgcgggggacgatgaagagggtggaggagatgcggacggaaga
gaccctggtcagccgggcacaggcaaaggtctttccaaggaacagaagagtggcctggac
atggtgaaacacatcatgctaagcctggatgaggaggatggcctgggagaaatttactcc
ttcagaaaagcaattgagcagctgtgcatgttcaagcgcatcgagaggaaacctatggcc
tggccctgtcagctgaccatcggcagctgtctgcccatccgtattgttggatacaaagca
gtgacagaagagaaactgaagaaaacctggactacagttgacgctcaaaccaaccagaaa
gacgatgtgaagagagagactgtctactgtctggatgatgacaatgagacagaggtgcaa
aaggatgatactatccaaggttttcgttatggaagtgatattgttcccttctccaaagta
gatcaagaccagatgaaatacaaacatgatgggaagtgctttgctgttctcggcttctcc
aagcagagcatgcttcaacgccatcagttcatggggactcaagtcatcaagatattttct
gccaaggatgatgagcatgcaggagttgcgctgtccgctctcatccgagcgctagatgaa
ctcaacatggtggccattgtacgttacgcctatgaccggcgcagcaaccctcaagtagga
gcagccttcccgtgcatcaagcaggactatgagtgtctgatgtacgtccagctgcccttc
atggaagacctcagacagttcacatttccttctcttgcaaacaacaaaaagttcactcca
tcagacacccagctgtctgctgttgactctcttattgactccatgatgttggtagagggg
gatgatcaaaaggacatgttcaaggtccaccacattcccaaccctgccttccagaggcac
ttccagtgtctgcatcatcgggcagtaaaccctggcacccctcttccccccatggagcct
tggctgaaggctgctcttgagtgccctgatgtcattagtgaacgttgccaggctccacta
gaggagataaagaggaagtttcctctgacagaagtggagaaaaaaaagaagctcaagact
agtgctcagatttttggcaaagactccgaggagccagatgccaagaaggcaaaaggagac
gaagaagaggaggagtatagtctggctgacatcgccgaaggctctgtgacttcggtggga
agcgtggatccagccagagacttccgtactctgataaggaagaagagtcttccatttgga
gaggtatgtcagcaactgactcgcaggatagagcagttgcttagcaacaagaacacacac
tactacatgaaaagcatcacctgtatccaggcttttagagagcagtccgttaagctgggg
gatgccaatctgtacaatggctacctccagtccctaaaaagaagcattccaaacagaggg
ctggaggtcttctgggacctgcttgttcaagatgccatcactctgatcagtaaggacgag
gttgaaggaagcactgtatccaaaaacgaagctaatcagtttctggttactgaggagaag
aaagaggaggcagctgcaccacaagctgaagatactggagatgttgatgacttgctggac
atgatgtaa
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