Perca flavescens (yellow perch): 114563856
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Entry
114563856 CDS
T07494
Symbol
bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114563856 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflv03019
]
114563856 (bard1)
04121 Ubiquitin system [BR:
pflv04121
]
114563856 (bard1)
03036 Chromosome and associated proteins [BR:
pflv03036
]
114563856 (bard1)
03400 DNA repair and recombination proteins [BR:
pflv03400
]
114563856 (bard1)
Messenger RNA biogenesis [BR:
pflv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
114563856 (bard1)
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
114563856 (bard1)
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
114563856 (bard1)
DNA repair and recombination proteins [BR:
pflv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
114563856 (bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
zf-RING_6
Ank_4
Ank_3
Ank_5
BRCT_2
BRCT
zf-RING_5
Ank_KRIT1
zf-RING_10
PTCB-BRCT
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
114563856
NCBI-ProteinID:
XP_028446588
LinkDB
All DBs
Position
11:23570389..23594529
Genome browser
AA seq
790 aa
AA seq
DB search
MENDTLVQTNDWRNTKEAVANFRRLLLCSKCSNLMTEPVCLGMCEHMLCRSCAGPRVGDG
CVVCQSPAWVKDIQINRQLNSIIQLFCGLESLLNPIEHPDSPLAEIQTQPQSPVFKHKKN
FKIWFSPRSRKVRCMVEKPSEVTIPASTSSGETAAAQPDTLPAQCQDLSVFNFTSSSQDS
GSSCSQRFKNKNRKKRSTKKNAASRKVSVQGATSTTRKQTKQKMKKNRLEAINQQWGITK
EVDALKEKEQPCAEGARRSSKRVSFQSPAITSDEPQSEVPEGSTNELCSSRSTITESLSG
RNITVLNDQTQSGQRMSDSVRQHDKTDCPEKQDNVSPPKHSSKRSRVEEKAATLETTPKR
PRASPGRRRISQMSPALSSASPRCDKSIKNSGHKQGDSPSVLATVGRKSPGASVGRPTSG
SPAVMKRNHKGETLLHLAAIKGDVEAVKELLDQGADPNLKDNAGWTPLHEACNLGHLALV
DVLVSRGALLNTPGYENDSPLHDAARNGHTAIVKLLLQLGASQNVLNLYGKRPADYAVSL
EILAIFKEASEGTQYANTSLSPSASLSMVSDCVRRDEMVVFLASKLSQPERLQVSKLGEL
LGGRMADTFSGSVSHVVVPEGHMPITNSTLLGLLAGCWVVKFSWVEACLQAGKRMPETEH
EAGEGPQRSRVNRCSLLPPLFDGCFFFLLGSFKAPSKGELTKLLQEGGGQLLSRQPKPDS
DVTQTLSAAAYHALPGSDQALCTQYIIFDPQDPHKPAVVRRGKVWSAPSTWLIDCVTAFR
LLPVSVKASV
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgataccctcgtgcagacaaatgattggaggaatactaaggaggctgttgcg
aactttcgacgactgctactttgctccaaatgctcaaatttaatgactgaacctgtgtgt
ctaggaatgtgcgagcatatgctgtgcaggtcctgtgctggcccccgggtaggagatggc
tgcgtcgtgtgtcagagtcctgcatgggtgaaggacatccaaatcaacaggcagctcaac
agcatcatacagctcttctgtggtttggagtccctgctcaatcccatagaacatccagac
tcccctctagccgagattcaaacgcaacctcagagccctgtctttaaacacaagaaaaac
tttaagatctggttcagcccccgtagccgcaaggtacgctgcatggtggagaagccttca
gaggtcaccataccggcgagcacgtcttctggagaaacagccgctgcgcagccagacacc
cttcctgctcaatgtcaggacctgtcggttttcaatttcacctcgtcctcccaagactct
ggctcttcttgttctcaaagatttaaaaataagaacaggaagaagaggtcaactaagaaa
aatgctgccagcaggaaggtgtcagtgcaaggagccactagcaccacacgaaaacagacc
aagcagaagatgaagaagaacaggctggaggctataaaccagcaatgggggatcaccaag
gaagtagatgctttaaaggaaaaggagcagccctgtgctgaaggggccaggaggtccagc
aagagagtttccttccaaagccctgctattacgtctgacgagcctcagtctgaagtgcca
gaggggagtactaatgaactctgctctagcagaagcaccataacggagagtctctcagga
cgcaacatcactgtacttaatgaccaaacccagtctggtcagagaatgtcggacagtgtc
cgtcagcatgacaaaacagactgtcctgaaaaacaggacaacgtatctcccccaaagcat
tcatcaaaaagatccagagtagaggagaaggctgccacattggagaccacaccaaaaagg
cccagggcttctccaggccggcggagaatatcacagatgtcaccagctctttcttcagca
agcccccggtgtgataagagcattaaaaactcaggacataagcaaggagacagcccctct
gtcctagccactgttggtagaaaatctcctggtgcatctgttggacgccccacctcaggg
agccctgcggttatgaagaggaaccacaagggagagaccctgctgcacctagctgcaata
aagggagatgtagaggctgtcaaggaactgctggaccagggggctgaccctaacctgaag
gataatgctgggtggacacctctgcatgaagcgtgtaacctgggtcacctggcgttggtg
gatgtgttggtctcaaggggagccctgttgaatacgcctggctatgaaaacgactctccg
ctccacgatgctgcgaggaacggacacacagccattgtcaagctgctgctgcagcttgga
gcctcgcagaacgtacttaatctgtatggaaagcggcctgctgattacgcagtgagtttg
gagatactggcgattttcaaagaagcctcagaaggaacccaatatgctaatacatctctg
agcccctcagccagtctctctatggtgagcgactgtgtgaggagggatgaaatggtggtg
tttctggccagcaagctgtcacagccagaacggcttcaagtgtcaaaactgggagagcta
ctcggagggaggatggccgacaccttttctggctcagtgagccatgtcgtggtgccagaa
ggacacatgcccatcaccaactccaccctcctgggtcttcttgctggctgctgggttgtc
aaattcagctgggtggaggcatgtctgcaggcaggcaagaggatgcccgaaactgagcac
gaagcgggagaaggcccccagcgcagccgcgtcaacagatgtagcttgctcccgccactc
ttcgatggctgcttcttcttcctccttggctcctttaaggctccttccaaaggcgaactc
accaagctgctccaggaaggaggtggtcaactcctgagccggcagcccaagcccgacagc
gatgtgacacaaaccctgagtgccgccgcttaccacgcactgccaggctccgaccaggcc
ctctgcacccagtacatcatctttgacccccaggacccccacaagccggcagttgtgagg
cgaggtaaggtgtggtcagctccctccacctggctcatcgactgcgtcacagcattccgc
ctcctccccgtgtcagtcaaagcgtcggtctaa
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