Perca flavescens (yellow perch): 114563873
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Entry
114563873 CDS
T07494
Symbol
exosc9
Name
(RefSeq) exosome complex component RRP45
KO
K03678
exosome complex component RRP45
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114563873 (exosc9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflv03019
]
114563873 (exosc9)
Messenger RNA biogenesis [BR:
pflv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
114563873 (exosc9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
TFIIF_alpha
Nop14
Motif
Other DBs
NCBI-GeneID:
114563873
NCBI-ProteinID:
XP_028446626
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All DBs
Position
2:33994940..34005950
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AA seq
436 aa
AA seq
DB search
MKDTPLSNCERDFLLKAIEEKKRLDGRQTYDYRKMKITFGTDFGCCFVDLGKTRVMAQVS
GELVTPKENRPNEGIMFFNIELSPMASPAFEAGRQSELSVKLNRQLERCLRNSKCLDTES
LCVVSGEKVWQIRVDVHMLNHDGNLMDAASIAAITALCHYRRPDVGIQGDDVTVYSPEER
DPIPLSIYHMPISVSFSFFQQGTYLLVDPCEREERVMDGLLMIAMNKHREICSIQSSGGI
MLLKEQVMRCSKIASVKVSEITELISKALENDKKARKAGGKCGFAESMPQERITALKMDE
TPVEMTDVTNRANDIVQKAEAPPQTVPSPLVPVPGVGQVGQGLHNTWGLEEEDEEEEDDE
EEEENDNSCEEQEETKMEEEQHEKEESGGGDVVEISDSEEEEVVILHPEKPDNAPTNTGS
SSYQRGAATSKKKQKK
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacacgccgctgtctaactgtgagcgggatttcctgctcaaagctatcgaagag
aaaaagcgcctggatggacgacagacctacgactacaggaagatgaagatcacatttggg
acggactttggatgctgctttgtggatctgggaaaaacaagggtcatggcccaggtgtcg
ggggaactggtgactcctaaagagaatcgaccaaacgaaggaatcatgttcttcaacatc
gagctgtcacccatggcctcgccagcgtttgaagcaggcagacagtccgagttgtccgtg
aagctaaacagacagctggagagatgcttgaggaactccaagtgccttgataccgagtcc
ctgtgtgtggtgtctggagaaaaggtgtggcagatccgagtggatgtccacatgttgaat
cacgatgggaacctgatggacgctgccagcattgctgccatcaccgctctgtgccactac
aggcgtcctgatgtcggcatccagggagacgacgtcacagtgtacagtccagaggagaga
gaccctattcctctgagtatctaccacatgcccatcagcgtcagcttctccttcttccaa
caaggaacctatctgctggtggacccctgtgaacgggaggagcgggtgatggacggcttg
ctgatgatcgccatgaacaaacaccgagaaatctgctccatccagtccagcgggggaatc
atgttgcttaaagagcaggttatgagatgcagtaaaatagccagtgtcaaagtttctgaa
atcacggagctcatcagcaaagctctggagaacgataagaaagcaaggaaggcgggtggc
aagtgtggttttgcggagtccatgccacaggagcgaatcacagccctgaaaatggacgag
actccagtggagatgacggatgtgaccaacagagccaatgacatcgtccagaaagccgag
gccccacctcagacggtgccttctccactggtgcctgtcccaggtgtgggccaggtaggg
caggggctgcataacacctggggactggaggaggaggatgaggaggaggaggatgatgaa
gaggaagaggaaaatgacaacagttgtgaagaacaggaggaaacaaagatggaagaagaa
cagcatgaaaaggaggagagcggaggaggagatgtggttgagatatctgacagcgaagag
gaggaagtggtcatacttcatccggagaaaccagacaacgctcccacaaacacaggatcc
agttcctaccagaggggggcagcaacatcaaagaaaaaacagaaaaaatga
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