Perca flavescens (yellow perch): 114564012
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Entry
114564012 CDS
T07494
Name
(RefSeq) syntaxin-binding protein 5-like
KO
K08518
syntaxin-binding protein 5
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflv04131
]
114564012
Membrane trafficking [BR:
pflv04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
114564012
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
114564012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
Beta-prop_RIG_2nd
Beta-prop_HPS5
WD40_Prp19
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Lgl_C
Synaptobrevin
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
114564012
NCBI-ProteinID:
XP_028446915
LinkDB
All DBs
Position
11:26947159..27094781
Genome browser
AA seq
1180 aa
AA seq
DB search
MKKFRKVLDGLTTSSPGGTIGSPSGGSAAGTPTATPTPREIDIQETLVSENFQLCKTVRH
GFPYQPTALAFDPVQKILAIGSRTGGVRILGRPGVDCYCQHESGAAVLQLQFLINEGALV
TACADDTLHLWNLRQRRPAVLHSLKFNRERITFCHLPFQSKWLYVGTERGNTHIVNIESF
ILSGYVIMWNKAIELSTKTHPGPVVHLSDSPKDEGKLLIGFESGTIVQWDLRLKKADFRI
YYDEAIHSVSWHHEGKQFMCSHSDGSLSMWNLRNTTKPFQVTFPHGKIQKDGRKESCKPI
LKVEYKTSRNSEPFFIFSGGLSYDKAGRRPTLTIMHGKAITVLEMDYPIVEFMALCETPY
NNEVQEPYAVVVLLEKDLIVVDLTQSNYPVFENPYPMDIHESPVTCTAYFADCPPDIIPI
LYSIGVKHKKTGYSQKEWPVGGGTWTLGSHTYPEIIITGHADGSIKFWDASAITLQMLYK
LKTSKAFEKPKPSEGRVADLVEDDPFAIQMVSWCPQSRIFCVVGISAHIILYRFSKYDAN
TQIVSLEVRLQCEAEDVISPSENENNPCFTESGTHSPQPHHQHAASPGSGTTEGNKDSNP
CLKVKDRMVRVPPGYQAELVVQLLWADGEPPQQITSLDINSAYGLLAFGNCNGLAVVDYL
QKTILLCMSTLDLYGAADPYQRLTRSPRRNRQSTSGLTELSDNQQSIDMDRSKSPTSVKG
PGRKLSLPTDLKTDLDHVNGHCTSPASQSCSAGKPRVPMGPEGPRLTRRGPGRPPFRKAQ
SAACMEISLPVSHTEAAATESRENSFSRSRSSSVSSIDRDTKEAITTLQFGESYARKSDT
LPTPCLWVGTSLGVVLLIPMSIPTDHEERMEEPVTIGPSGTVLMLKGSVLRISFLDCMGA
LIQSPYEVWRDLNAHEDPDRMRSRKLVHISPSSSQDTCGEGHLAVVCSEKQAKVFLMPSQ
SCLFVHNITESSFVLRADVVSVCNSVCLACFCANGHVMTLSLPSLRPLLDVNYLPLADMR
IARTFCFTHGGQALYLSSPTEIQRITYSQEMCDNLQEMLGELFTPIETPEAQNRGFLKGF
FGGNSHNFDREELFGEAAAGKGSRSLAQHIPGQAGMEGMKVAASGVVGDLARARIALDER
GQRLGELEERTALMMTSAETFSKHAHEVMLKCKDKKWYQL
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttcgaaaggtgttggacggcttgaccacctcctctccgggaggaactatc
ggatccccatcgggcggcagcgcggccgggactcccaccgcgacaccaactcccagggaa
atcgacatccaggagacgctcgtttcggaaaactttcagctgtgtaagacggtgcgtcat
ggtttcccttatcagcccactgctttggcctttgaccctgtgcagaagatcctggccatt
ggctccaggacagggggtgtacggatactgggacgacccggggtggactgctactgtcag
catgagagcggagcagcggttcttcaactgcagttcctcatcaatgagggggcgctggtc
acagcctgtgcagatgacacgcttcacttgtggaatctccgtcagaggcggccagctgtc
cttcattcactcaaattcaacagagagaggatcacattttgccaccttccctttcagagt
aaatggctgtacgtggggacagagcgtggaaacacacacatcgtcaacattgagtccttc
attttgtctggatacgtcatcatgtggaacaaggccatagaactatcaactaaaactcat
ccaggacctgtggttcatttaagtgacagcccaaaggatgaaggcaagctgcttataggg
tttgagagtgggacgatcgtacaatgggacctccggcttaagaaggccgacttcagaatc
tactacgatgaggccatccattcagtcagctggcatcatgaagggaaacagttcatgtgc
agtcactcagacggcagcctatcgatgtggaacctcagaaacaccaccaagccattccag
gtcaccttccctcatggaaagatacagaaggatgggagaaaggagtcatgtaaacccata
cttaaagtggagtacaagacctcaaggaacagcgagcctttttttatcttctctggcggt
ctttcatatgacaaggcagggcggcggccaacgttaaccatcatgcacggcaaggccatc
actgtgctggagatggactatcctattgtagagttcatggcactctgcgagactccttac
aacaacgaggtccaggagccttacgcagtggtggtgcttttggagaaggacttaatcgtg
gtggatctgacacagagcaactaccctgtctttgagaatccttaccccatggacatccat
gagtctccagttacctgcacagcctattttgcggactgtccgcccgacattatccccatc
ctatactcaataggagttaaacacaagaaaactggctatagccaaaaggagtggccagtc
gggggaggaacatggactttaggctcccacacttacccagagatcattatcacaggacat
gctgatggatcaattaagttttgggacgcatcagcaatcacactacagatgttgtacaag
ctgaagacctccaaagcgtttgagaagccaaagccaagtgagggcagggtggccgatttg
gtggaggatgacccctttgctattcagatggtcagctggtgcccccagagtcgcatcttc
tgtgtggttggcatctcagcccacatcatcctgtatcgcttcagcaaatatgatgccaac
actcagatagtgtcactagaggtgcgcttacagtgtgaggcggaggatgtcatttctcca
tccgagaatgaaaacaatccctgcttcacagagtccggcacccactcaccacaaccccac
caccaacacgcagctagccccggcagtgggacaactgagggtaacaaagacagcaatccc
tgccttaaggtgaaggacaggatggttcgggtccctcctggctaccaagcagagctggtt
gtccagctgctgtgggcagatggagaacctccacaacaaatcaccagcctggacatcaac
tctgcttatggccttttggcgtttgggaactgcaacggcctagcagtggtggattacttg
cagaaaaccatccttttgtgtatgtcgacactggatctgtatggagccgcagacccatac
cagcgccttacccgctccccacgcaggaacagacagtccacctcaggccttactgaactc
tctgacaaccagcagtccattgacatggatagaagcaagtcgcccacctcagtaaaggga
cccggcagaaagttaagtctgccgacagatcttaagactgatcttgatcatgtcaatgga
cattgcactagtcccgcctcccagtcctgctcggcagggaagcctcgtgtcccgatgggt
cccgaggggccacggcttacccgcagaggccctggccgaccgcccttccgcaaggcccag
tccgctgcttgcatggagatctctttgcctgtgtcccacactgaagctgctgcaacagag
agtcgtgaaaactccttcagccgttcacgcagttccagtgtgtccagcatcgatcgcgac
accaaagaggctatcacaacactgcagttcggagagtcctatgcgcgcaagagtgacacc
ctgcccaccccatgtctgtgggtgggcaccagcttaggcgtggtcctgctcatcccaatg
tccattcccaccgatcacgaggagaggatggaggaacctgtgaccatcggccccagcggc
acagtcctgatgctgaagggctccgtgttgcgcattagcttcctggactgcatgggagcg
ctcattcagagcccctacgaggtttggcgggacctcaacgcccatgaggaccctgaccga
atgcggagtcgcaagctggtccacatttcaccatcatcctcccaggacacctgcggagag
ggacatctggcggtggtgtgctccgagaagcaagccaaagtattcttgatgccctcgcag
tcttgcctctttgtccacaacatcactgagtcatcctttgtactgagagccgacgtggta
tctgtgtgcaacagtgtgtgcctggcctgcttctgtgctaacgggcacgtcatgacactc
agtttgccaagtctaagaccactcttggatgtcaattacctgcctcttgcagacatgcgc
attgcaagaaccttttgcttcacccacggggggcaggcattatatctcagctccccgaca
gagatccagagaattacatacagccaggagatgtgtgacaacctgcaggaaatgctgggg
gagctgtttacaccaatagaaacaccagaagcccagaacagaggctttctaaagggcttc
tttggaggaaattctcataacttcgacagagaggagctctttggtgaggcagcagctggg
aagggttctcggagtctggcccagcacatccctgggcaggcggggatggagggcatgaag
gtggcagcttccggagtggtgggggatctggcacgggcccgcattgctctggatgagaga
ggccaaaggctgggggagctggaggagcgaaccgccctaatgatgaccagtgcagaaact
ttctcaaaacacgctcatgaggtgatgctaaagtgcaaggacaagaagtggtaccagttg
taa
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