Perca flavescens (yellow perch): 114564361
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Entry
114564361 CDS
T07494
Symbol
slit2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pflv00536
]
114564361 (slit2)
Glycosaminoglycan binding proteins [BR:
pflv00536
]
Heparan sulfate / Heparin
Axon guidance molecules
114564361 (slit2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
EGF
LRR_4
LRR_5
Laminin_G_2
Laminin_G_1
LRRNT
LRR_9
LRRCT
hEGF
EGF_TEN
LRR_1
LRR_14
EGF_DL_JAG
JAG1-like_EGF2
EGF_Teneurin
Laminin_G_3
LRR_EndoS
EGF_3
Motif
Other DBs
NCBI-GeneID:
114564361
NCBI-ProteinID:
XP_028447449
LinkDB
All DBs
Position
2:complement(23820861..23910018)
Genome browser
AA seq
1567 aa
AA seq
DB search
MVGALSPVGPGRSPVTALGLLVAVLVSVLSGGADGQPCPAQCSCTGTTVDCHGQGLRSVP
RNIPRNTERLDLNANNLTKITKADFAGLRHLRVLQLMENKITTIERGAFQDLKELERLRL
NRNNLAVFPELLFLGTTKLYRLDLSENQIQGVPRKAFRGAVEIKNLQLDYNHISCIEDGA
FRALRDLEVLTLNNNNISRLSVASFNHMPKLRTFRLHSNNLQCDCHVAWLSEWLRQRPRL
GLYTQCMAPPHLRGHNVAEVQKKEFACTGHQSSSSTSCSVLQCPESCTCSNNIVDCRGKG
LTEIPTNLPETITEIRLEQNAIKVIPAGAFSPYKKLRRIDLSNNQISELASDAFQGLRSL
NSLVLYGNKITEISKALFEGLFSLQLLLLNANKIACLRVDAFQDLHNLNLLSLYDNKLQT
IAKGTFSSLRAIQTLHLAQNPFICDCHLKWLADYLQDNPIETSGARCTSPRRLANKRIGQ
IKSKKFRCSAREQYFIPGTEDYRSKLGGDCFADLACPEKCRCEGTTVDCSNQKLTKIPDH
IPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINLSNNRITDIEEGTFEGASGVNELILT
SNRLENIHHRMLKGLSGLRTLMLRSNRISCVSNSSFVGLSSVRLLSLYDNQITSMNPGAF
DTLHSLSTLNLLANPFNCNCHLAWLGDWLRRKHIVTGNPRCQSPYFLKEIPIQDVAVQDF
ACEDGNDENSCSPVLRCPAECSCLDTVVRCSNKGLTTLPKGLPKETTELYLDGNHFTQVP
VELSNYKHLTLIDLSNNQISTLSNHSLSNMSELLTLILSYNRLRCIPVRAFDGLKSLRLL
SLHGNDISLIPEGAFKDLSSLSHLALGANPLYCDCHMQWLSDWVKSGYKEPGIARCAGPG
DMTDKLLLTTPSKKFTCTGPVDMSVQAKCEPCLSNPCKNDGTCSNDPVHYYRCTCPYGFK
GQNCEEPIHACISNPCQNGGTCHLKEGEGSNFWCVCPEGFEGDGCEINIDDCEDNDCENN
STCVDGINNYTCMCSLEYTGELCEEKLDFCTPELNPCQHDSKCILTPQGYKCECTPGYVG
EHCELDYDDCEENKCQNGGQCIDAVNGYTCVCPEGYSGLFCEFSPPMVLPRTSPCDNHEC
LNGAQCVVMGSDPRCQCLHGYKGDRCETLVSVNFVNRESYLQLPSSLLSPDTNISLQIAT
DEDSGVLLYKGDNDHIAMELYRGRLRVSYDTGSYPPSAIYSVETVNDGSFHVVELVASDQ
TLSLSIDGGPPKSINSISKQSTLNIDSPLYLGGMPERASASGGLSSMQHSSGGRNGTSFH
GCLRNLYINGKLQDLGAGLGTGAPGSGTAQSTTRQWLGRGVEPGCQPCQRGACVQGDCHP
TGHRGFTCTCHPGWTGTVCDQQVNNPCDGNKCIHGTCLPINSYSYSCRCQPGFAGVLCDE
QEQDAANPCSLSRCKHGKCRVSGLGKAYCECNSGYTGEACDREVACRGERVRDVYQRQQG
YAACQTQEKVSRLECRGSCPGGAEGQGPCCTPLRSKRRKYTFQCTDGSSFVQEVEKVVKC
GCTQCSS
NT seq
4704 nt
NT seq
+upstream
nt +downstream
nt
atggtgggagctctgagccccgttggccctggccgctccccggtgactgcgttgggactg
ctggtggctgttctggtatcggtcctgtccggcggagcggacggccagccctgcccggcc
cagtgctcctgcaccgggactacagtggactgtcacggccaagggctccgcagcgtgccc
aggaacataccccgcaacacggagagactggatctgaatgcaaacaacctcactaaaatc
accaaggcggattttgcaggactgaggcatctgcgagtgttgcagctaatggagaacaaa
atcaccacaatcgagagaggggccttccaggacttaaaggagctggagagactgcgcctg
aatcggaataatctggccgtcttccccgagctgcttttcctgggaacaacaaagctttac
agacttgatctcagcgagaatcagattcagggggttccaagaaaagccttcaggggagct
gtggaaatcaagaacctccagttggactacaaccacatcagctgtattgaagatggagct
ttccgagcgttacgtgacctggaagtgctcaccctcaacaacaacaacatcagccgactg
tctgtagccagtttcaaccacatgccgaagctcaggacctttcgcctgcactccaacaac
ctgcagtgtgactgccacgtggcctggctgtcagagtggctgcgacagcgcccccgtctg
ggtctttacacacaatgcatggcaccgccacacttgagggggcacaacgtggctgaggtg
cagaagaaggagtttgcctgcacaggtcaccagtcgtcatcatctacctcctgcagtgtg
ttacagtgcccagagtcctgcacctgcagtaacaacatcgtggactgcagaggaaaggga
ctgactgaaatacccaccaacctgcctgaaaccatcactgagatacgactggagcagaac
gccatcaaggtgatcccagctggagccttttctccttataagaagctgcgcaggatagac
ttgagtaacaaccagatatcagagttagcctcggatgcctttcaaggcctgcgctctctc
aactctctggtgctatatgggaacaagatcactgagatttctaaagcactatttgaggga
ctgttttctctgcagctattgttactgaatgctaataagatagcgtgtctgcgtgtggac
gcatttcaggacctccacaacctcaatctgctttcactatatgacaacaagctccagacc
atcgccaaggggaccttctcgtcactaagagccatacaaacgcttcacttagcccaaaac
ccatttatctgtgactgccatctgaagtggctggcagattacctgcaggacaatcccatt
gagacaagcggtgcccgctgcacaagcccccggcgcctcgccaacaaacgaatcggacaa
atcaagagcaagaagttccgctgctcagcaagagaacagtatttcatcccaggtactgag
gattaccgcagtaagctgggaggagactgcttcgcagacttggcctgccccgagaagtgc
cgttgtgagggcaccacagtcgactgctccaaccaaaaacttaccaaaataccagatcac
atccctcagtacaccgccgaactgcgtctgaacaacaatgaattcactgtgcttgaggcg
acagggatcttcaaaaagttgcctcagctgaggaagattaacctgagcaataaccgtatc
actgacatagaggaggggacatttgaaggagcctcgggggtcaatgagttgattctgacc
tccaacagactggagaacatacaccaccgcatgctgaagggactcagtggcctccgcaca
cttatgttgaggagtaaccgtatcagctgtgtgagtaacagcagctttgtggggttgagc
tcagtccgtctcctgtcgctctacgacaaccagatcacctcaatgaaccctggagccttc
gacacactgcattccctgtccacactcaaccttctggccaatcccttcaactgtaactgt
cacctggcttggctcggtgattggctcagaaggaaacacatcgtcactggtaaccctcgc
tgccagagtccttatttcttgaaggagatccccatccaggatgtagctgtccaggacttt
gcctgtgaagatggtaacgacgagaacagctgctctccagtgctgaggtgtccagcagag
tgttcctgtctggacactgtggtgcgctgcagcaacaagggcctcaccacactgcccaaa
ggcctgcccaaagagaccactgaactgtatctggatggtaaccacttcactcaggttcct
gtggagctctccaattacaaacacttaacactcattgatttgagtaacaaccagatcagc
acgttgtccaaccacagcctcagtaacatgtccgagctgcttaccctaatcctgagctac
aaccgcctgcggtgcataccagtgagggcgttcgatggactcaagtctctccgtttgctg
tctctccatggtaacgacatatcactgataccagagggagccttcaaagacctgtcatcg
ctctcccacctggctctgggtgccaaccctctgtactgtgactgccacatgcagtggttg
tcagactgggtgaagagcggctacaaggagcctggcatcgcccgctgtgccgggcccggt
gacatgacagacaaactgctgctcaccacgccttccaagaagtttacctgcacaggtcca
gttgatatgagtgtccaggctaagtgtgagccctgtctgtccaacccctgcaagaacgat
ggcacttgctctaatgacccagtgcactactaccgctgcacctgcccctatggatttaag
ggacagaactgtgaggagcccattcatgcctgtatcagtaacccgtgccagaatggcggc
acttgccacctgaaggaaggagaagggagcaacttttggtgtgtgtgtccagagggcttt
gaaggcgacggatgtgagatcaacatcgatgactgtgaggacaacgactgtgagaacaac
tccacctgcgtcgatggaattaacaactacacatgcatgtgctcactagaatacacaggg
gagttatgtgaagagaaactagatttctgcactccagagctgaacccatgtcagcacgac
tcaaagtgcattttgactcctcagggatacaagtgtgaatgcactccaggctatgtaggt
gagcactgtgagctggattatgacgactgtgaagagaacaagtgtcagaacggaggtcag
tgcattgacgcagtcaatggatacacctgcgtctgtcctgagggatacagtgggttattc
tgcgagttctctcccccgatggtacttcctcgtaccagcccctgtgacaaccacgagtgc
ctcaacggggcgcagtgtgttgtcatgggatcggacccccgctgccagtgtctccatggc
tacaagggcgatcgctgtgagacgctggtcagtgtcaactttgtcaaccgtgagtcctac
ctgcaacttccatccagtctcctctcaccggacaccaacatcagcctacagattgctaca
gatgaggacagtggcgtgttgttgtataaaggggacaatgatcatattgccatggagctg
tacaggggacgcctcagggtcagctacgatactggatcttaccctccttcagctatatac
agtgtggagacagtgaatgatggtagcttccatgttgtggaattggtagcatcagaccag
actttgtctctgtccattgacggcgggccgcccaaatccattaactccatcagcaaacag
tccacactcaacatagattctccactttacctgggaggtatgccagaacgcgcctcagcc
tccgggggtctctcgtccatgcagcacagctcaggcggacgcaacggcaccagcttccat
ggctgcctccgtaacctgtacatcaatgggaagctgcaggacctgggggccgggctgggg
acaggggctccaggctccgggactgcacagagcaccaccagacagtggctgggccgcggg
gtggagccaggctgccagccatgccagaggggagcctgtgtccagggtgactgccaccca
acagggcatcgtggcttcacctgcacctgccacccgggttggacgggaacagtgtgtgac
cagcaagttaacaatccctgtgatggcaacaagtgtatccatggtacctgccttccaatc
aactcctactcctactcctgtcgctgccagcctggttttgctggtgtactctgtgatgag
caggagcaggatgcagctaacccctgcagtctgtctcgctgcaaacatggcaaatgtaga
gtgtctggcctgggcaaggcatactgcgagtgtaacagtggatatacaggagaggcgtgt
gacagagaggtggcctgccgaggggaacgggtccgagatgtctaccagagacagcaaggc
tacgcggcgtgccaaacccaggagaaggtctcccgcctagagtgtcggggcagctgcccg
gggggagcagaaggacagggcccctgctgcacccccctccgcagcaaacgcaggaaatac
accttccagtgcactgatggctcttctttcgtccaggaagtggagaaagtggtcaagtgt
ggctgtacacagtgttcctcataa
DBGET
integrated database retrieval system
