Perca flavescens (yellow perch): 114564402
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Entry
114564402 CDS
T07494
Symbol
trim45
Name
(RefSeq) tripartite motif-containing protein 45 isoform X1
KO
K12021
tripartite motif-containing protein 45
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflv04121
]
114564402 (trim45)
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
114564402 (trim45)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-B_box
zf-RING_5
Ig_GEX2_N
zf-C3HC4_4
zf-RING_2
Snapin_Pallidin
Big_1
Motif
Other DBs
NCBI-GeneID:
114564402
NCBI-ProteinID:
XP_028447530
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All DBs
Position
11:10821798..10839479
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AA seq
627 aa
AA seq
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MQKEGSREVSFGPELGGFHGGRLFTGLFVAPIGSTRSPQKQTMSQSEQKENAEQPTLNSE
HEQNGVLVNPKAVCNVCRRLYRDPKILPCLHTFCSDCIGQLEPFSVSSRSRRDAPGNGRG
EALEEDRPTVTVLCPDCDTEVDIPPSGPGGLTTDHLALDDVFLETLVTDGPLGCDLCGEG
DAKSRCDVCCVNLCEFCCQAHRRQKRTASHPIQCLEELKSRGRLCRPVLCSLHPGQELRL
FCQPCDLPVCLECAAMLHRDHHCCPTRDVIDRHGDRIRELVTVRLRPCMERLKDSLHKVE
VSQEALQARVDATANEVRVFARAYASAVEAHCLSLLHRLEELRVQRRNQLHLQRAQLQQA
LLDVGGGVEFAERLLSCGSDAEILSAKGVTLRRLTSLAKNSYDPNPATVATDDSSGISFM
AREPAGDVEGYPVVGVINSKTVDLSKCTVEGEGLQRGVEGQQGYFALVCRDSAGEQVARG
GEHVLVSIVHKEKKNCTLETTVVDNSDGSYRVSYTPEESGTYSVWVCVKAQHVKGSPFLL
NVKRKLRRHSGTFHCCSFCSSGGAKEARCGCAGTMPGGFKGCGHGHKGHPGKPHWSCCGS
TAEQSECLPRSVLAAVSPRGHLRTVEL
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaggaaggttccagagaagtttctttcggtcctgagctcggtgggtttcacggt
gggaggcttttcactggtttgtttgtggcacccattggtagcaccagaagtccccaaaaa
cagacaatgtctcagtctgaacagaaagaaaacgcggagcagccaacgttaaactcggaa
cacgaacaaaacggcgtcttggtgaacccaaaagcggtttgtaacgtgtgtagacgcttg
taccgggaccctaaaatcctcccgtgtctgcacaccttctgctccgactgtatcggccag
ctggagcccttctcggtgtcttcgcgtagccgccgcgacgcaccgggaaacggcaggggc
gaagccttggaggaggaccgacccaccgtcacggtgctctgtcccgattgtgacaccgag
gtggacatccctccgtcgggaccgggaggtctgaccaccgaccacctggcgctggatgac
gtattcctggagaccctggtgacggacggcccgctgggatgcgacctgtgcggcgaagga
gacgccaagagccgctgcgacgtctgctgcgtcaacctgtgcgagttctgctgccaggcg
cacaggcggcagaagagaacagcatctcaccctatccagtgtctggaggagcttaagtct
cgtggtcgtctgtgccgccccgtcctctgctccctccaccccggccaggagctccggctc
ttctgtcagccctgcgacctgcccgtctgcctggagtgtgccgccatgctgcaccgcgac
caccactgctgccccacccgtgatgttatcgatcgtcatggagaccgtatccgagagctg
gtcacggtgcgcctgcgaccttgcatggagcgtctgaaggactcactgcacaaggtggaa
gtatcccaggaggctttgcaggcacgggtggacgcgacagcgaacgaggtgagggtgttt
gcgagagcctacgccagcgctgtggaagcccattgcctgtcactgctgcaccgcctggag
gagctccgtgtccaacgcaggaaccagctccacctgcagagggcgcaactgcagcaggct
ctgttggacgtcggcggcggcgtggagtttgcagagagactgctgagctgcggctcggac
gctgagatcctgagcgccaaaggagtgacactaagaagactgaccagcctggcaaagaac
agctacgaccccaacccggcaaccgtcgccaccgacgacagcagcggcatcagcttcatg
gccagggagccggcgggggatgtggagggctacccggtggtcggggtgatcaactctaaa
accgtggacctcagcaagtgcaccgtcgaaggggaaggtctacagaggggcgtggagggg
cagcagggctacttcgccctggtgtgccgagactcagctggggagcaggtggcacgaggt
ggagagcatgtcctggtcagcatcgttcacaaggagaagaaaaactgcacattggagacg
actgtggttgacaacagcgatggatcctacagagtttcatacacgcctgaagagtcagga
acctactcggtgtgggtttgtgtcaaagctcaacatgtcaagggctctccgtttcttctg
aatgtgaagaggaagttgaggcgtcacagcgggacgtttcactgctgctctttctgctcc
agtggaggagccaaagaggctcgctgtggctgcgcgggaaccatgccaggaggatttaaa
ggttgcggtcacggtcataaaggacaccccgggaagccccactggtcttgttgcggcagc
accgcggagcagtccgagtgtttgccccggagcgtgttggctgcagtctccccccgcggc
cacctgcggaccgtggagctctga
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