Perca flavescens (yellow perch): 114564442
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Entry
114564442 CDS
T07494
Symbol
smarcal1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 isoform X1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pflv03036
]
114564442 (smarcal1)
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
114564442 (smarcal1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
DEAD
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
114564442
NCBI-ProteinID:
XP_028447585
LinkDB
All DBs
Position
11:complement(22812304..22825794)
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AA seq
892 aa
AA seq
DB search
MSNQLTAEQLRKIEENRRKALDRRAQRLGQTISSDTQSSSGLSSTSVQVTLQPSKQSVTS
DHAALAQHIASAPKRFVPPFKKDSPSFSNYKQGPKQQQQLSATSNQINQSNYASTGQIQV
IDPFPQTRNQHVSSPVLSSGGNFGVPQPVHPKPNLTSNSSGGAVGPFYKQTSKPAQSPAA
QLPYSSSTLNAVPAKKPVISVRGKCAAHTEGRFRVEVGYHTELIAVFKSIPSKNYDPAIK
MWNFSLEDYHQLMAEAAAIPSVSLRPLEGMEAVDVAAATSRARDGAALGALLKLCSGWQK
PGATLRGQCILVSPTKFEVDVGYHVDVIAAFKQMPTKNYDMKTRKWSFSVEDYKRLLDLL
GGIAAVEVEPLPRAVVQAFSSRFDGTEARSLDVPEADLSSIDTSLTCSLMPFQREGVNFA
VSKQGRLLLADDMGLGKTVQAICIAAYYRSEWPLLVVAPSSVRFTWAEAFRRWLPSLSPD
RINVVVKAKDDLRSGLVNIISYDLLSRMDKQQPGKPFNVLIMDESHFLKNMKTARFKAAL
PLLKAAKRVILLSGTPAMSRPSELYTQILAVRPTLFPRFHEFGMRYCGATQLTWGWDYSG
SSNLGELKLLLEECLMLRRLKCDVLSQLPAKQRKVVTVTIDGINTRLKAALSAAAKQLVS
EHSNKKKEKEALLIFYNHTAEAKLQAIMEYITDMLECGREKFLVFAHHKLVLDHIITELV
KKNVSHIRIDGSTPSAERQQLCDKFQYSSKTCVAVLSVTAANMGLTLHSADLVVFAELFW
NPGILVQAEDRVHRIGQTSNVNIHYLVAKGTADDHLWPMIQEKMNVLEQVGLSESNLSDK
ASNASFHSKDPNQRSIMEMFQRSFTADDDIDEVLLLEAANDWEDIPPENSCG
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatcagctgactgcagagcagctgcgaaagattgaggaaaacagacggaaggct
ttggacagaagagcccaaagacttggacagactattagcagcgatacccagagttcgtca
ggcctcagcagtacgtcagtgcaggtaacgttacagccctctaaacagagcgttacctcg
gatcatgctgccctggctcaacacatagcttctgcaccaaaacggtttgtcccgcccttc
aaaaaagactcacctagcttcagtaactacaagcaaggcccaaagcagcagcagcagtta
tctgctactagcaaccaaatcaaccagagtaactatgcttctacgggacagatacaagtc
attgacccatttcctcagacaagaaatcaacatgtgagcagccctgtcctgtctagtgga
ggaaactttggtgtgccacagcctgttcaccccaaacctaacctcacctccaacagctct
ggtggtgcagtaggccctttctacaagcaaactagtaaacctgcccaaagtcctgcagca
cagctgccctacagctcatcaactttgaatgctgtacctgcaaaaaagcctgtcatctct
gtaagaggaaaatgtgcagctcacacagagggccgcttcagagtagaagtggggtaccac
acagagctgattgctgtttttaaatccatcccctcaaagaactatgaccctgccataaag
atgtggaacttcagcctggaggactatcaccagctaatggcggaagcagctgctattccc
tctgtgtctttgaggcctctggagggaatggaggcagtggatgtcgcagcagccaccagc
cgagctcgtgacggtgcggcactgggggcgctgctgaagctgtgtagcggctggcagaaa
cctggagccactttgcggggccagtgcatcctggtgtctccgacaaagtttgaggttgac
gtcggttaccatgtcgacgtcattgcagcattcaagcagatgccgacaaagaactatgac
atgaaaacaagaaagtggagcttttcagttgaggattacaagagactcttggatctcctc
ggtgggatagcagcagtggaggtggagcctctgcccagggcagtagtccaggctttctct
tccaggtttgacgggactgaagccaggtctttagacgtccctgaagcagacctctccagc
atcgacacctcgctcacctgcagcctcatgcccttccagagggagggagtcaattttgcg
gtgtctaaacaaggccgtctcctcctggcagatgacatgggtctgggaaagactgtgcag
gccatctgtatagccgcttactacaggtctgagtggcccttgctggtggtggctccctcc
tctgtgcgattcacctgggccgaggccttcagacgctggctcccctccctgagtcctgac
cgaatcaacgtggtggtgaaggccaaagacgatctgcgttctggtttggtcaacatcatc
agctacgacctgctgagcaggatggacaagcagcagccaggaaaacccttcaatgttctc
atcatggacgagtctcactttctgaagaacatgaagactgctcgttttaaagcagccttg
cctctgctgaaggcagcaaagcgagtgattcttctgtctgggacccctgcaatgtccaga
ccatctgagctctacacccagattctggctgtcagacctacactcttccctcgcttccat
gagtttgggatgcgctactgcggtgccacacagttgacttgggggtgggactactcaggc
tcatctaaccttggggagttgaagctgttgctggaagagtgtctgatgttgcgccgcctt
aagtgcgacgtcctctctcagcttcctgctaaacaacgcaaggtcgtcacagtgaccata
gatggtatcaacacccgcctaaaagctgccctgtcagctgctgccaagcagttggtcagt
gaacacagcaataaaaagaaagagaaggaagccctcctcatcttttataaccacacagct
gaagccaagctgcaagccattatggagtacatcacagacatgctggagtgtgggagggag
aagtttctagtgttcgcccatcataagttagtcctggatcatatcatcaccgaactagta
aaaaagaatgtcagtcacatccgtattgatgggtccactccttcagctgaacggcagcag
ctgtgtgacaagttccagtactcgtctaagacctgtgtggctgtgctttccgtcactgca
gctaacatgggtctcaccctgcactctgctgacctggtggtcttcgctgagcttttctgg
aaccccgggattctcgttcaggcagaggatagggtgcaccgtattggacaaaccagcaat
gtgaacattcactacctggttgccaagggaacagctgatgatcacctgtggccaatgatc
caggaaaaaatgaatgtcttggagcaagtgggtctgtctgagtcaaacctctcagacaaa
gcatcgaatgccagcttccactctaaggaccctaaccagaggagcatcatggagatgttc
cagaggtctttcactgcagatgacgacatagatgaagtcctcttattggaggctgcgaac
gactgggaggacatcccgcctgaaaacagttgtggttaa
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