KEGG   Perca flavescens (yellow perch): 114564459
Entry
114564459         CDS       T07494                                 
Symbol
wdr3
Name
(RefSeq) WD repeat-containing protein 3
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
pflv  Perca flavescens (yellow perch)
Pathway
pflv03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pflv00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    114564459 (wdr3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pflv03009]
    114564459 (wdr3)
Ribosome biogenesis [BR:pflv03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    114564459 (wdr3)
SSDB
Motif
Pfam: Beta-prop_WDR3_2nd Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd WDR55 WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Utp12 Beta-prop_TEP1_C NBCH_WD40 Beta-prop_WDR75_1st DSE1_N ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR41 WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_NOL10_N Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_VPS8 ASA1 PEP5_VPS11_N CFAP251_N Beta-prop_WDR19_1st Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_ACSF4 WDR54 RMC1_N VPS11_N WD40_like Beta-prop_WDR75_2nd Beta-prop_WDR35_TULP_N Beta-prop_LRRK2 Utp21 PAC11 B-prop_COPA_B_2nd Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 114564459
NCBI-ProteinID: XP_028447615
LinkDB
Position
11:11094914..11113117
AA seq 941 aa
MGLTKQYLRYAASAVFGVIGSQKANIAYVTLRGGERGRYVAVAACEHVFIWDARKGEKVL
ILQGQKHEVTFLCPSPDGVHIAVGYEDGAVRIFSLLNGESNVSFNGHKTSVSVMQYDTLG
ARLVTGSKDTDVIVWDIINECGLYRLRGHKDVITQALFLKDKNLLVTSSKDSFVKWWDLD
TQHCFKTMVGHRSEVWGMVLLNQENRLLTGSADSELRAWDINYLQEEKAEGEPKVKKGKT
LLDDDDDEDNEEGVDESLEERILSCRKAGSILREARDRVVSLAADAKARVIACHGNDAVL
ELFTVLSEEEVQKKMTKKMKKAKKKAAKSQEDACEEAAEPVVERTLKDEILRLTNIKASS
KIRWVDCLSCAGGELKVALLLQNNTIETYSLRTSDKTPTANKTARLTLGGHRTDVRTLAF
SSDNLAVLSASGDTVKVWNRSTLQVIRTMACEYALCSLFVPGDRQIILGTKSGKLQIFEL
ASGSLLETVDAHNGALWSLCLAPDQRGIVTGSADKTVKFWEFELIKDEGTVQKRLTVKHT
RTLKLEEDILCVKFSPDHRLLAVSLLDCTVKVFYTDTLKFFLSLYGHKLPVLCLDISHDN
TLIATGSADRNVKIWGLDFGDCHRSMFAHDDSVMFLQFVPKTHLFFTAGKDKKIKQWDAD
KFEHIQTLEGHHREVWCLTISPSGDHIVSSSHDKSLRLWERTREPIILDEEREMEREAEF
EESMAKGDVPVVPGETEGEAAPASKKTVETVKAAERIMEALELYKEENRKMEVYKYACQT
AGNEVPPPKPNPILVAFGNVSPSRYVLDVVKKVRSSELEVSLLVLPFPYIPELLTLFNGY
IKQGLEVELVCRCLFFLLKIHFGQISSNQMLLSVIDELRTNTVSKVREIRDVMGFNSAAL
QFLQREIESKEDVMFFADATGQLAEKKKKRRKRERAILTIA
NT seq 2826 nt   +upstreamnt  +downstreamnt
atggggttgaccaagcagtacctgcgctacgctgccagtgcagtgtttggagtgattgga
agccaaaaagccaacattgcatatgtgaccctccgagggggagagagggggcgctacgtc
gctgtggctgcatgtgaacacgtgttcatctgggatgcccgaaaaggagaaaaggtcctg
atcctgcagggccagaaacacgaggtgaccttcctctgcccctcgcccgatggcgtccat
atcgccgtgggttacgaggacggtgccgtgcggatcttcagcttgctgaacggcgagagc
aacgtctctttcaatggccacaaaacttctgtcagcgtaatgcaatatgacacgctcgga
gctcggctcgtcactggttccaaggacacagatgtgatcgtgtgggacatcatcaatgag
tgtgggctgtacaggctcagaggccataaagacgtcatcacacaggccttgttcctcaaa
gacaaaaacctcctggtcacgagctccaaggacagttttgtgaagtggtgggacctggac
acacagcactgcttcaagactatggtgggccatcgcagtgaggtgtggggcatggtgctg
ctgaaccaggagaacaggctgttaacaggctcagcagacagtgagcttcgagcctgggac
atcaactacctgcaggaggagaaagctgaaggtgagcccaaagtaaagaaggggaaaact
ctgctggatgatgacgacgatgaggacaacgaggaaggggtggacgaaagtcttgaagag
cggatcctgagttgtaggaaagccggatcaatcctgagagaggcccgagaccgagttgtt
tcgctggcagcagacgccaaggccagagtcatcgcctgtcatggcaatgatgcagtcctg
gagctctttactgtgctgtcagaggaggaagtgcagaagaaaatgacaaagaagatgaag
aaagccaaaaagaaggcagcaaaatctcaggaagatgcatgcgaggaggcagcagagccg
gtggtggagaggacgctgaaggacgagatcctccgactgaccaacatcaaggcctcctcc
aagatcaggtgggtggactgcctgtcgtgtgcaggtggtgagctgaaggtggcgctgctg
ctgcagaacaacaccatcgagacctacagcctgaggacttcagacaagacccccaccgcc
aacaagacggctcgcctcacgctcggcggccaccgcaccgacgtccgcacgctggccttc
agctcggacaacctggccgtcctctccgcctccggggacaccgtcaaagtttggaacagg
tcaactctgcaggtgattcgcaccatggcctgtgagtacgccctctgctccctcttcgtg
cctggagacagacagatcatcctgggaactaagagcgggaagctgcagatctttgagttg
gcctcaggaagcctactggagactgtggatgcccataatggagctctgtggtccctgtgc
ctggccccagaccagagggggattgtcacaggaagtgcagataagactgtgaagttctgg
gagtttgagctgataaaggacgaagggactgtccagaagaggctgacagtgaaacacaca
cgcactctgaaattggaggaagacattttgtgtgtgaagttttctcctgaccacagactg
ctggccgtctctctgttagactgcactgtcaaggtcttctacacagacacacttaagttc
ttcttgtcgctgtatggacacaagctgcctgtactttgtctggacatctcacacgataac
acacttatcgccaccggctccgccgacagaaacgtcaagatctggggtttggatttcggc
gactgtcaccgctccatgtttgctcacgacgacagcgtcatgttcctccagtttgtcccc
aagactcatctgttcttcacagcggggaaggacaagaagatcaaacagtgggacgccgac
aagtttgagcacatccagacactagagggccatcatcgggaggtttggtgtctgaccatc
agccccagcggtgaccacattgtgtcgtcgtcccacgacaaatccctgcgactgtgggag
aggaccagggagcccatcatcctggatgaggaacgggagatggaacgggaagcagagttt
gaggagagcatggccaaaggagatgtccctgtggtacccggagagacggaaggagaggca
gcaccagccagcaagaagaccgttgagactgtcaaagctgcagagcgaatcatggaggct
ctggaactttacaaagaggaaaacaggaagatggaagtgtataaatacgcttgtcagaca
gcaggcaacgaggttcctccgccgaaacccaaccctatcctcgtggcttttggaaatgtt
tcaccgtcccgctatgttttagacgtcgtgaagaaggtccgatcgagtgagctggaggtt
tctctgctggtgttaccattcccttacatccccgagctgctgacgctgttcaacggttac
atcaagcagggcctggaggtggagctggtctgccgctgccttttcttccttctcaagatc
cattttggtcagatctccagtaaccagatgctgctgtctgtcatagacgagctacggacc
aatactgtctcaaaagtgcgcgagatcagagacgtgatgggctttaatagcgcggcgctc
cagttcctccagcgggaaatcgagagcaaagaggacgtgatgttctttgccgacgccaca
ggccaactggcggagaagaagaagaagaggaggaagagggagcgagccatcctgaccatc
gcttga

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