Perca flavescens (yellow perch): 114564496
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Entry
114564496 CDS
T07494
Symbol
col8a1
Name
(RefSeq) collagen alpha-1(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
pflv
Perca flavescens (yellow perch)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
114564496
NCBI-ProteinID:
XP_028447676
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Position
11:complement(15829534..15831843)
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AA seq
664 aa
AA seq
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MPMHKGKENARKGGGYNGGQDKGQTIPSGAEGIPQGEQGPAGPPGPEGPAGPPGPPGNGQ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NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgcccatgcacaagggcaaagaaaatgctcgtaaagggggtggctataatggtggccaa
gacaaaggtcagactatccctagtggtgctgagggaattcctcaaggagagcaaggccca
gctgggccacctggaccagagggacctgcaggacctcctgggcctccaggtaatggacag
cctggacctgtgggacgacccggacctccaggtccaccaggagggcctggagtgggaaac
ccaggtttaccaggactggcaggcaagccaggaggaaatggtgaaaatggaccacaagga
gaaatgggccctaggggtgaagaagggccagctgggcagccaggaactcagggtccccca
gggccacctgggctaccaggaataggtaaaccaggggcccagggatttccaggtcaacca
gggcccaaaggagagccaggtcataaaggtctgccaggactaccaggattaccgggaccc
aaaggagacaaagggatgggccagccaggacaacctggtcacaaagggctcccagggccc
tcaggacctgctggcccaagagggctgcctggttttggaaaacctggcttgaatggggca
ccagggccccaaggaccaccaggagagaaaggacatcctggagagctaggaccagctggg
ccaccgggtgaaggaggacagcctggcccaccaggtctacctggtcaaggaaagccaggt
caaaatggcctgccaggacaaccaggcatgccaggtgggaaaggtcatccaggaccgcca
ggtttgccaggaaagccaggacttcctggatttggtaagccaggactcccaggaccaaag
ggtgataaaggtatgggtgggtcacctggacttccaggaccaaaaggagataagggccat
ggaggactacctggtatgcttggaccccctggaccaaatggtccatcaggtcctccaggc
cctatgggaaccccaggaggtttaggtgcacctggtcctaaaggagactgtggagaagga
ggacctaaagggcttgacggagcccagggtgaccctggtccctctgggatacctggtaag
gatggtctgcctggagagaatggagagccaggaccgagaggtccaccaggaccaattggt
gccaaaggagacagtggacataaaggtctacctggtatacctggttctccgggacttcct
gggccaaaaggacaaagtggattacctggtgaagtgggacctcaaggtcctaaaggaatc
cctggaatggatggcacagcaggaccaatcggacctcctggtcttccggggacaaaagga
gatagcggactacctggtcaaccaggcattgcaggtgagggaaatccaggtcttcctggt
cccataggacccccagggaaagagggcccatcaggacccccgggtcaaccagggcagcct
ggccttcctggaccaccaggttcacctggtctgtctgatgacatggctggagtgctctct
gtgatgggccctggagtagatggtgttaaggctggtagttatggtaagaagggcaagtat
ggaggcaatggggctgaagtaatgggtgccagtgggttggagatgccagcatttacagct
gtagtaacaaatccctttccccctgtgggcactccagttgtttttgataagctcttgtac
aatggtcgccaaaactacaaccccgagacaggtatcttcacctgtgacatgcctggcatt
tattactttgcctaccacgttcattgcaaaggagctaatgtgtgggtggctttgatgagg
aacaatgagccagtaatgtatacatatgatgaatacaaaaagggtttcctagatcaagca
tcagggagtgcagtactacctctacaacctggggacactgtgtatattcagctgccctca
gatcaggctgcaggactttatgctggacagtatgtgcactcctccttttctggttatttg
ttatatccgatgtaa
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