Perca flavescens (yellow perch): 114564518
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Entry
114564518 CDS
T07494
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04145
Phagosome
pflv04814
Motor proteins
pflv05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
114564518
09142 Cell motility
04814 Motor proteins
114564518
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
114564518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pflv03036
]
114564518
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pflv04812
]
114564518
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
114564518
Cytoskeleton proteins [BR:
pflv04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
114564518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EML
Dynein_IC2
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_IP5PC_F
WD40_RFWD3
Beta-prop_DCAF4
Nbas_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
114564518
NCBI-ProteinID:
XP_028447702
LinkDB
All DBs
Position
11:complement(20786187..20803095)
Genome browser
AA seq
627 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEEERKKQAADQLKDAAQHQDDSDLEKKRREAD
ALLQSMGITSETPVVPPPISPTTKSAGTPSEAGSQDSDGAVGPRTLHWDSDPSTLQLHSD
SELRRGTPKLGMAKVTQVDFPPRETVSYTKETQTPVMTQQKEEEEEEEEIVAPQPVVETQ
TEKPDQKEEEEAPPHELTEEEKLQILHSEEFVNFFDHSTRIIERALSEHVDLFFDYSGRD
LEEKEGEIQAGTKLSLNRQFMDERWSKHRVVTCLDWSLQYPELLVASYNNNEDAPHEPDG
VALVWNMKYKKATPEYVFHCQSAVLSAAFAKFHPNVVVGGTYSGQIVLWDNRSNKRTPVQ
RTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSQPQDSMELVFKQSKA
VAVTSMSFPLGDVNNFVVGSEDGSVYMSCRHGSKAGISEMFEGHHGPITGIHCHTAAGPL
DFSHLFVTSSFDWTVKLWSTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGVGHLDL
WNLNNDTEVPTASVTVEGNPALNRVRWAHSGREIAVGDSDGQILVYDVGEQTAVPRNDEW
TRFVRTLAEINENRDDAEELAAQRLAA
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacaaaagtgagctgaaagcagagcttgaaaggaagaagcaacgcttggcacaa
atcagagaggagaagaaaaggaaggaggaggagcgcaagaagcaagcggcagaccaattg
aaagatgctgcgcagcaccaggatgattctgacctggagaaaaaaaggcgtgaggctgac
gctcttctacagagtatgggcataacctcagaaactcctgttgtccctcctcccatctct
ccaactaccaaatcggcgggcacaccaagtgaggcagggagccaagactctgatggagcc
gttggacccaggactctgcactgggactctgacccgtccactcttcaacttcactctgat
tctgagctgcggcgtggaactccaaaactgggaatggccaaagtcacacaagtggacttt
cctccacgtgagactgtgtcctacacaaaagagacccagacacctgtcatgactcagcaa
aaagaagaggaggaagaagaggaagaaattgttgcacctcaaccggtagtggagactcag
actgagaaaccggaccagaaagaggaggaggaagcacccccccacgagctgactgaggag
gaaaaactccagatcctgcactccgaagagtttgtgaatttctttgaccacagcactcgc
attattgagcgggctctatccgagcatgtggaccttttttttgactacagcggccgtgac
ctggaggaaaaggagggtgaaatccaggctggaacaaagctctccctcaacaggcagttc
atggatgagcgctggtccaagcatcgtgtcgtcacctgtctggactggtccctccagtat
cctgaactcctggttgcctcatacaacaacaacgaggatgctcctcacgagccagacggt
gtagccttagtatggaacatgaagtacaagaaggccacaccggagtacgtcttccactgt
cagtctgcagttctgtcggctgcatttgccaagttccaccccaacgttgtggtggggggc
acatactcagggcagattgtattatgggacaacaggagcaacaagaggaccccggtgcag
aggactcccctgtcagcagcagcacacacgcacccagtgtactgtgtgaatgtagttggc
acccagaacgcccacaacctgattagcatctccactgatggcaagatttgctcatggagt
ctggacatgctctctcagccacaggacagcatggagctggtgttcaagcagtccaaagct
gtagctgtcacctccatgtctttccctctcggagatgtcaacaatttcgtggtgggcagc
gaggatggctccgtctacatgtcgtgtcgtcatggaagcaaagcaggcatcagtgagatg
tttgagggccaccatgggcccatcacagggatccactgccacacagctgcagggcctctg
gacttctcccacctgtttgttacctcctctttcgactggactgtcaagctgtggagcacc
aagaacaacaagccactttactcatttgaagataactcggattacgtgtatgacgtcatg
tggtctcccactcaccctgctctgtttgcctgtgtggacggagtcggccatcttgacctg
tggaacctcaacaacgacacagaggttcctaccgccagcgttacagtggagggtaaccca
gcgctcaacagggtcagatgggctcattctggcagagaaatcgctgtgggagactctgat
ggacaaattctcgtgtatgatgttggagagcaaactgcggttccacgaaacgacgagtgg
acccgttttgttcgcacgctggcagagatcaacgagaacagagatgatgcagaggagctg
gcagctcagcgcctggctgcctga
DBGET
integrated database retrieval system
