KEGG   Perca flavescens (yellow perch): 114564531
Entry
114564531         CDS       T07494                                 
Symbol
itgb5
Name
(RefSeq) integrin beta-5
  KO
K06588  integrin beta 5
Organism
pflv  Perca flavescens (yellow perch)
Pathway
pflv04145  Phagosome
pflv04148  Efferocytosis
pflv04510  Focal adhesion
pflv04512  ECM-receptor interaction
pflv04810  Regulation of actin cytoskeleton
pflv04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pflv00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    114564531 (itgb5)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    114564531 (itgb5)
   04148 Efferocytosis
    114564531 (itgb5)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    114564531 (itgb5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    114564531 (itgb5)
   04810 Regulation of actin cytoskeleton
    114564531 (itgb5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pflv04131]
    114564531 (itgb5)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:pflv04515]
    114564531 (itgb5)
Membrane trafficking [BR:pflv04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    114564531 (itgb5)
Cell adhesion molecules [BR:pflv04515]
 Integrins
  Integrin beta subunits
   114564531 (itgb5)
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail EGF_integrin PSI_integrin Integrin_b_cyt I-EGF_1 EGF_2 vWA_SIBA-E EGF_Teneurin EGF_TEN DUF2975
Other DBs
NCBI-GeneID: 114564531
NCBI-ProteinID: XP_028447732
LinkDB
Position
11:9152562..9218817
AA seq 803 aa
MWSPGTWMWRAALCCMLLETFLHTARGLNMCMSGSATSCEECLLIHPSCAWCAQEEFGRG
WTLTSRCDLSPNLQKRGCEARFIEYPTSSISVLQNMPLSSKGSGLTQYGVVQIMPQKISL
SLRPGDQTWFGLQVRQVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLALEMSKLTSNFR
LGFGSFVDKNMSPFSYTASKYQENPCNGYKLFPNCVPTFGFRHILSLTDKVDRFNEEVQK
QMVSRNRDAPEGGFDAILQAAVCKEEIGWRKEAYHLLVFATDDVPHLALDGRLGGLVQPH
DGQCHLNEDNEYSASEKMDYPSLALLGEKLAENNIFLIFAVTKRLYVIYKDFTALIPGTT
VEILDQDSKNVIQLIVAAYNNIRSKVELSVWDHPEDISLSFTATCQDGKPLPGLRKCADL
KIGDTVSFNVSVEARSCPPRGTDQSFTIKPVGFKERLEVSVDYQCDCGCSRTAQTNSSIC
SSIGTYNCGTCHCEPGYLGARCECQEGEASSMYLSACREAEGKQICSGRGECSCNQCLCY
ESEFGKIYGSYCECDDFSCARHKGVLCSGHGECHCGECKCHAGYIGDNCNCSTETSSCIA
DDGQMCSGRGSCVCGRCQCTEPGAFGDTCEKCPTCPDACGTKRECIECRLFNSGRLADNQ
TCQRLCKDEIITVETLKTEEPGAVLCLYKTDNDCVMKFTYSEHASGQSVLAALKEPECGG
GPDALMVLLAVVGSILLVGVVLLAAWKLVITIHDRREFSRFQSARSRARYEMASNPLYKQ
PVSTLFVESDCNMYGKSFNGGVH
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgtggagcccggggacgtggatgtggcgagcggctctgtgctgcatgcttctggaaaca
tttctacacactgcgagaggtcttaacatgtgtatgagcggcagcgctacctcctgtgaa
gaatgcctcctgatccaccccagttgcgcctggtgcgcacaagaggagttcgggaggggg
tggactctgacgtcacggtgcgatctgagtccaaacctgcagaagaggggctgcgaggcg
cggttcatcgagtaccccaccagcagcatctcggtcctgcagaacatgcctctgagctct
aaagggtccgggttgacgcagtatggcgtcgtccagattatgcctcagaagatctctctc
agcctgcggccaggagaccagacgtggttcgggctgcaggtgcggcaggtggaggactac
ccagtggatctctactacctgatggacctctcgctttccatgaaagacgatctggacacc
atccgtaacttgggcaccaagctggctctagagatgagcaagctcaccagcaacttcagg
ctgggctttggctcctttgtggacaaaaacatgtcccccttctcctacacagcatccaag
tatcaggagaatccatgcaatggatacaaactgttccccaactgtgtccccaccttcggt
ttccgccacatcctctcgctgacagataaagtggaccgttttaacgaggaggtgcagaag
cagatggtatctcgcaaccgggacgcgcccgagggtggattcgacgccatcctgcaggct
gctgtttgtaaggaggagataggttggaggaaggaggcctaccacctgctggtgtttgcc
acagacgatgtccctcaccttgctctggacggcaggctgggaggcctcgtccagccgcac
gatggacagtgtcacctcaatgaggacaatgaatacagcgcttccgaaaagatggactat
ccctctctggctcttctgggggagaaactggcggaaaataacatctttctcatctttgca
gtgacaaaacggctgtacgttatttataaggattttactgcactgatacctggaactaca
gtcgaaatcctggaccaggactccaagaatgtaattcagctgatcgtcgcagcttacaac
aacatccgctctaaagtggagctgtcggtgtgggatcacccagaggacatcagcctttcc
ttcaccgccacctgccaggacggaaagccgctgccaggcctcaggaagtgtgccgacttg
aagataggagacactgtatcgttcaacgtgagcgtggaggcgaggagctgccccccccgc
ggcaccgaccagagcttcaccattaagccggtgggcttcaaagagcgtttggaggtgtct
gtggattatcagtgtgactgcggctgcagccggacagcacaaaccaacagcagcatctgc
agctccataggtacgtataactgtgggacttgtcactgtgagccgggctacctgggcgcc
cgctgcgagtgccaggagggcgaagccagcagcatgtacctcagcgcctgccgggaagcc
gagggcaagcagatctgcagcgggcgaggagagtgcagctgcaaccagtgtctgtgctac
gagtcggagtttggcaagatttacggcagctactgcgagtgtgacgacttctcctgtgcc
agacacaaaggcgtcctctgctcaggtcacggagaatgtcactgcggggagtgtaaatgc
cacgccggttacatcggcgacaactgtaactgctccacagagacgtcgtcctgcatcgca
gacgacgggcagatgtgcagcgggcgaggcagctgtgtgtgcggccgctgtcagtgcacc
gagccaggagccttcggagatacctgtgagaaatgtcccacctgccccgatgcctgtggc
actaaaagggagtgtatcgagtgccggcttttcaactccggaaggcttgcagacaaccag
acctgccagcgcctgtgcaaggatgaaatcatcactgtggagaccctcaaaacggaggag
cccggcgctgtgctttgtctgtataagacagacaacgattgtgtcatgaagttcacgtat
tccgagcacgccagcggacagtccgtcctcgcagctctgaaagagccagagtgcggcggt
gggcccgatgctctgatggtgctgctggcggtggtcggcagcatcctgctggtgggggtg
gtgctgctcgctgcctggaagttggtcatcaccattcatgaccggagagagttttcgcgc
ttccagagtgcacgctcgcgagcccgatacgagatggcctccaaccctctgtacaagcag
cctgtctctacactttttgtagaaagcgattgcaacatgtatgggaagtccttcaacggg
ggggtccactga

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