Perca flavescens (yellow perch): 114564531
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Entry
114564531 CDS
T07494
Symbol
itgb5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04145
Phagosome
pflv04148
Efferocytosis
pflv04510
Focal adhesion
pflv04512
ECM-receptor interaction
pflv04810
Regulation of actin cytoskeleton
pflv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114564531 (itgb5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
114564531 (itgb5)
04148 Efferocytosis
114564531 (itgb5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
114564531 (itgb5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
114564531 (itgb5)
04810 Regulation of actin cytoskeleton
114564531 (itgb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflv04131
]
114564531 (itgb5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pflv04515
]
114564531 (itgb5)
Membrane trafficking [BR:
pflv04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
114564531 (itgb5)
Cell adhesion molecules [BR:
pflv04515
]
Integrins
Integrin beta subunits
114564531 (itgb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
EGF_integrin
PSI_integrin
Integrin_b_cyt
I-EGF_1
EGF_2
vWA_SIBA-E
EGF_Teneurin
EGF_TEN
DUF2975
Motif
Other DBs
NCBI-GeneID:
114564531
NCBI-ProteinID:
XP_028447732
LinkDB
All DBs
Position
11:9152562..9218817
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AA seq
803 aa
AA seq
DB search
MWSPGTWMWRAALCCMLLETFLHTARGLNMCMSGSATSCEECLLIHPSCAWCAQEEFGRG
WTLTSRCDLSPNLQKRGCEARFIEYPTSSISVLQNMPLSSKGSGLTQYGVVQIMPQKISL
SLRPGDQTWFGLQVRQVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLALEMSKLTSNFR
LGFGSFVDKNMSPFSYTASKYQENPCNGYKLFPNCVPTFGFRHILSLTDKVDRFNEEVQK
QMVSRNRDAPEGGFDAILQAAVCKEEIGWRKEAYHLLVFATDDVPHLALDGRLGGLVQPH
DGQCHLNEDNEYSASEKMDYPSLALLGEKLAENNIFLIFAVTKRLYVIYKDFTALIPGTT
VEILDQDSKNVIQLIVAAYNNIRSKVELSVWDHPEDISLSFTATCQDGKPLPGLRKCADL
KIGDTVSFNVSVEARSCPPRGTDQSFTIKPVGFKERLEVSVDYQCDCGCSRTAQTNSSIC
SSIGTYNCGTCHCEPGYLGARCECQEGEASSMYLSACREAEGKQICSGRGECSCNQCLCY
ESEFGKIYGSYCECDDFSCARHKGVLCSGHGECHCGECKCHAGYIGDNCNCSTETSSCIA
DDGQMCSGRGSCVCGRCQCTEPGAFGDTCEKCPTCPDACGTKRECIECRLFNSGRLADNQ
TCQRLCKDEIITVETLKTEEPGAVLCLYKTDNDCVMKFTYSEHASGQSVLAALKEPECGG
GPDALMVLLAVVGSILLVGVVLLAAWKLVITIHDRREFSRFQSARSRARYEMASNPLYKQ
PVSTLFVESDCNMYGKSFNGGVH
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcccggggacgtggatgtggcgagcggctctgtgctgcatgcttctggaaaca
tttctacacactgcgagaggtcttaacatgtgtatgagcggcagcgctacctcctgtgaa
gaatgcctcctgatccaccccagttgcgcctggtgcgcacaagaggagttcgggaggggg
tggactctgacgtcacggtgcgatctgagtccaaacctgcagaagaggggctgcgaggcg
cggttcatcgagtaccccaccagcagcatctcggtcctgcagaacatgcctctgagctct
aaagggtccgggttgacgcagtatggcgtcgtccagattatgcctcagaagatctctctc
agcctgcggccaggagaccagacgtggttcgggctgcaggtgcggcaggtggaggactac
ccagtggatctctactacctgatggacctctcgctttccatgaaagacgatctggacacc
atccgtaacttgggcaccaagctggctctagagatgagcaagctcaccagcaacttcagg
ctgggctttggctcctttgtggacaaaaacatgtcccccttctcctacacagcatccaag
tatcaggagaatccatgcaatggatacaaactgttccccaactgtgtccccaccttcggt
ttccgccacatcctctcgctgacagataaagtggaccgttttaacgaggaggtgcagaag
cagatggtatctcgcaaccgggacgcgcccgagggtggattcgacgccatcctgcaggct
gctgtttgtaaggaggagataggttggaggaaggaggcctaccacctgctggtgtttgcc
acagacgatgtccctcaccttgctctggacggcaggctgggaggcctcgtccagccgcac
gatggacagtgtcacctcaatgaggacaatgaatacagcgcttccgaaaagatggactat
ccctctctggctcttctgggggagaaactggcggaaaataacatctttctcatctttgca
gtgacaaaacggctgtacgttatttataaggattttactgcactgatacctggaactaca
gtcgaaatcctggaccaggactccaagaatgtaattcagctgatcgtcgcagcttacaac
aacatccgctctaaagtggagctgtcggtgtgggatcacccagaggacatcagcctttcc
ttcaccgccacctgccaggacggaaagccgctgccaggcctcaggaagtgtgccgacttg
aagataggagacactgtatcgttcaacgtgagcgtggaggcgaggagctgccccccccgc
ggcaccgaccagagcttcaccattaagccggtgggcttcaaagagcgtttggaggtgtct
gtggattatcagtgtgactgcggctgcagccggacagcacaaaccaacagcagcatctgc
agctccataggtacgtataactgtgggacttgtcactgtgagccgggctacctgggcgcc
cgctgcgagtgccaggagggcgaagccagcagcatgtacctcagcgcctgccgggaagcc
gagggcaagcagatctgcagcgggcgaggagagtgcagctgcaaccagtgtctgtgctac
gagtcggagtttggcaagatttacggcagctactgcgagtgtgacgacttctcctgtgcc
agacacaaaggcgtcctctgctcaggtcacggagaatgtcactgcggggagtgtaaatgc
cacgccggttacatcggcgacaactgtaactgctccacagagacgtcgtcctgcatcgca
gacgacgggcagatgtgcagcgggcgaggcagctgtgtgtgcggccgctgtcagtgcacc
gagccaggagccttcggagatacctgtgagaaatgtcccacctgccccgatgcctgtggc
actaaaagggagtgtatcgagtgccggcttttcaactccggaaggcttgcagacaaccag
acctgccagcgcctgtgcaaggatgaaatcatcactgtggagaccctcaaaacggaggag
cccggcgctgtgctttgtctgtataagacagacaacgattgtgtcatgaagttcacgtat
tccgagcacgccagcggacagtccgtcctcgcagctctgaaagagccagagtgcggcggt
gggcccgatgctctgatggtgctgctggcggtggtcggcagcatcctgctggtgggggtg
gtgctgctcgctgcctggaagttggtcatcaccattcatgaccggagagagttttcgcgc
ttccagagtgcacgctcgcgagcccgatacgagatggcctccaaccctctgtacaagcag
cctgtctctacactttttgtagaaagcgattgcaacatgtatgggaagtccttcaacggg
ggggtccactga
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