Perca flavescens (yellow perch): 114564871
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Entry
114564871 CDS
T07494
Symbol
depdc5
Name
(RefSeq) GATOR complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
114564871 (depdc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflv04131
]
114564871 (depdc5)
Membrane trafficking [BR:
pflv04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
114564871 (depdc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
114564871
NCBI-ProteinID:
XP_028448310
LinkDB
All DBs
Position
12:28562207..28594450
Genome browser
AA seq
1596 aa
AA seq
DB search
MKTNKSYKLVLHKKGFGGSDDELVVNPKVFPQVSLRDIIEIAHPTDEYSPLLLQVKSLKE
DLQKVCSSLETISVDQTVAQAFKLRAYQDVIVNIVDPKDVTLDLVELTFKDQYIGRGDMW
RLKKSLVSTCAYVTQKVEFAGIRAQASELWVKGEKVTCGYISEDTRVVFRSTSAMVYIFI
QMSCEMWDFDIFGDLYFEKAVNCFLSDLFAKWKEKNCSHEVTVVLFSRTLYSAKTIDEFP
EILRGSIRQDPEGRFYEDFYRVVAQNERRDEWTSLLVTIKKLFIQYPVLVRLKEADGFPA
GYNSTAAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGMGVFEVDRLLMILTKQ
RMIDNGIGVDLVCMGEQPLHAVPLFKLHNRTTPGDSRVGDDYNLPHWINHSFYTSKSQNS
CSSFTPRIKLAGHKLHAEKFKSSKDHTLCAPKDSENSLPIQVDYDAYDAQVFRLPGPSRI
QRSTTFRMGRDKDTSARKSWGSVDISAGIGASPPVRSGGPEEQRSLASDDSLGTVSNMLL
IPRMPPAQYEVSSSLGYTSTRELLEKLMDPLRDSSAPGRFTVGSAESTLHIRPGGYTPQR
ALINPFTPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQGSQQRDPAHTS
AELLELAYHEATGRRTASMHAGENGLYIVGGMEECTGSPGSNNTSGTLTNRSSTFEDISL
SGADPTLLLSAPPTVPSFCCTVGVDWKSLTTPACLPLTTDYFPDRQALQNDYTEGCYDLL
PHSDLERREDEAPVMSASQVFEEFICQRLMQGYQIIVQPNNRKPQPAVATPLGSSPLYSR
GLVSLRRAEEEETVYWLSMGRTFHKVCLKDKIITVTRYLPKYPCESAQIQYSYSLCPPHS
DAQFVSCWVEFGHERLEEYKWNYLDQYICSAGSEDFSLIDSLKFWRTRFLLLPAGGARRV
ADGEGHWDVYGEGAGAGMGGSGDWVLLDGFIRFLEGLNRIRRRHRSDRIIRQKGTPLKGL
QVTSPLPQYPTEPVGPPQGKKGTSALSALLEMDQNQKTLEEQQQAKPSTAVSDPSSVATA
PTYVDSPRKDAAFILDFIRSPRSSYIYHFQLPAEASEAADKGVQPAVTAGAAAAAQPAGE
TAASSSTSDTSGQSAAGALSLSSSSTLLEILEAIKHPTTGVQLLPEQKGLPLNCFISAEV
VHWLVNNVDGVATQGMAVDIMQKMLDEGVVTHASGDAMRTFVYGFYFYRIVDEKDGPSSQ
LPSAAAGGWSTAALEDFALFQRKWFEVAFVLEERRPCDLPAFLLPWLPSRPASYASRHSS
FSRSFGGRSQAAALLAATVLEQKTVTLDVDVNNRSDRTEWCSCYYHGNFSLNAAFEIKLH
WMAVTAAVLFEMVQMWHRKAASCGFLLVPVLEVPFALTSYLCGDPLRAQLFIPLNIHCLL
KNSSDNLFEGFEPETYWDRMQLFQEAILYRFGFVHDKYSASAFNFPSDNKPQYIHVTGTV
FLQLPYSKRKYSSGQQRRRRNSTTSNSQGPFGGEERVGYYWAYNTMLTKAWRTGVLGDER
LADRLLRDFTDFCANKDNRLLHLWDSCQEKMNASAP
NT seq
4791 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccaataagtcatacaagcttgtgctgcacaagaaaggctttggtggtagcgat
gatgagttggttgtcaacccaaaagttttccctcaagtcagtctaagggatataatcgag
attgcacaccccacagatgaatacagtcctctcctgctgcaagtgaagagcctgaaagag
gaccttcagaaagtttgttcttctctagagacgatcagtgtggatcagactgtagcacaa
gcctttaagctgcgtgcttaccaggatgtcattgttaacattgtcgacccaaaggatgtt
acactggacctggtggagctgacgttcaaggaccagtacatcggcagaggagacatgtgg
agactaaagaagagtctggtgagcacatgtgcttatgtgacgcagaaagtggagtttgca
ggaatcagagcccaggccagtgaactctgggtgaagggagagaaagtgacctgtggttac
atcagtgaagacaccagggtggtgttcagatccacatctgcaatggtgtacatctttatc
cagatgagttgtgagatgtgggactttgacatctttggggatctctactttgagaaagct
gtaaattgtttcctgtcagaccttttcgccaagtggaaggagaagaactgcagtcatgag
gtgacagttgtgcttttctcacgtacattgtacagtgccaaaactattgatgaattccct
gagattctgagagggtccatcagacaggatccagagggacgtttttatgaagacttctac
agggtcgtggctcagaacgagagacgggatgagtggacatccttactggtcacgatcaag
aagctcttcattcagtatcccgtcctggtgcggctgaaagaagcagatggttttcctgct
ggttacaactccactgctgcacaaggaaactacctggaggccattaacctttcattcaat
gtgtttgacaagcactacataaaccgaaacttcgaccgcaccggccagatgtcagtggtc
atcacacccgggatgggagtgtttgaagtcgaccgcctgctcatgattctcaccaagcag
cggatgatcgacaacggtattggtgtagacttggtgtgtatgggggagcagccgttgcac
gcagttccgttattcaagctgcacaacaggacgacacctggagactctcgcgtgggcgac
gactacaaccttcctcattggatcaaccacagcttctacacctccaaaagtcagaactct
tgtagctccttcacacctcgaatcaaactggctggtcacaagctccatgctgagaaattc
aagagcagcaaggaccacactctctgtgctccaaaggactctgaaaacagcctgcctatt
caggtggactacgacgcctatgatgctcaggtgttcagactgcctgggccttcacgcatt
cagaggagcaccaccttcaggatgggtcgagacaaagatactagtgcgaggaagagctgg
ggctcggtggacatcagcgcaggcataggcgcgtccccgcctgttcgctctggaggtccg
gaggaacagcgtagcctggcctctgatgacagtctgggcactgtgtccaacatgctgctt
ataccccgcatgcctccagcacagtatgaagtcagcagctccctgggatacaccagcacc
agagagttgttggagaagctgatggacccgctgcgggactccagtgccccgggcaggttc
acggtgggaagtgctgagtccaccctgcacatccgtccaggaggttacacccctcagaga
gcactcataaaccccttcaccccctccaggatgcccatgaagctcacctccaaccggcgg
cgctggatgcacaccttccctgttggtccttctggagaggcgatccagatccatcaccag
accagacagaacatggcggaactgcagggcagccagcagagagaccccgcccacacctcc
gctgagctgctggagctggcctatcacgaagccactggaaggcgaacagcctctatgcat
gcaggagagaacggcctttacattgttggagggatggaagagtgtactggaagtccaggg
agcaacaacaccagtggaactctaaccaaccgcagctccacatttgaagacatttcccta
agtggtgccgatccaaccctgctgctgtctgcacccccgacagtgcccagcttctgctgc
acagtgggggtggactggaagtctctgaccacaccggcctgcctgcccctcaccaccgac
tacttccctgaccgccaggcgctacagaacgactacaccgaaggctgctacgacctgctg
ccgcacagtgacctggagaggcgcgaagatgaagctccagtgatgagtgcgtctcaggtg
tttgaggagtttatctgtcagaggttgatgcagggctaccagatcatcgtccagcccaat
aacaggaaaccacagcccgctgtggccacaccgcttggcagcagtcctctttactccaga
ggtttggtctctctgcgtcgagcagaggaggaggagacagtttattggctcagtatgggc
cggaccttccataaagtttgcctcaaagacaagataatcactgtcactcgctatctgccc
aagtacccgtgcgagtcagcacagatccagtacagctacagcctgtgtcctccacattct
gatgctcagtttgtgtcctgctgggtggagtttggccatgagagactagaggaatacaag
tggaactacctggaccagtacatctgctctgctggctcagaggacttcagtttgatagac
tctctgaagttctggaggactcgcttcctcctgctgcccgccggaggagctaggcgggtg
gcagacggggaggggcactgggatgtttatggggagggagcaggtgcggggatgggtggc
agcggggactgggtcctgctggatggcttcatccgcttcctggagggtctcaaccgtatc
cgccgtcgccaccgctccgataggatcatcagacagaagggcacaccactaaaaggactg
caggttaccagtcctctccctcagtatcctaccgagcctgtggggcccccacagggcaag
aaaggcacatcagctttatcagccttactggagatggatcaaaaccagaagactctggag
gagcagcagcaggcaaagccctcaacagccgtcagtgacccctcaagtgttgccacagct
cccacttacgtagacagtccccgcaaggacgctgcctttattttggattttatacgtagc
cctcgctcctcctacatctatcactttcagttgcctgctgaagccagcgaggctgctgat
aaaggagtccagccagcagtgacggctggagcagcagcagcagcacagccagcaggagag
actgcagccagcagcagcacctcagacaccagtgggcagtctgcagcgggagccctttct
ctgtcctcttcctcaaccctcttggagatcctggaggccatcaaacatcccacgacaggt
gtacagctgctgccggagcagaaaggtctgccgctcaactgctttattagcgctgaggtc
gttcattggctggtcaacaatgtggacggcgtggccacgcaaggcatggctgtggatatc
atgcagaaaatgctggatgaaggtgtggtgacccatgcttcaggtgatgccatgcgcacc
ttcgtctacggattctacttctacaggatagtagacgagaaggatggcccgagctcccag
cttcccagcgcggcggctggaggctggtctactgcagcgctggaggactttgctctgttc
cagaggaagtggttcgaggtggcctttgtgctggaggagcggcgaccctgcgacctcccg
gccttcctcttgccctggctgcccagccggccggcctcctacgcaagtaggcacagctcc
ttcagccgcagctttggaggacgcagccaggccgccgcactgctagctgctacagtcctg
gagcagaagacggtcactctggatgtggacgttaacaaccgcagtgaccgaactgaatgg
tgcagctgttattaccacggaaacttctccctcaacgctgcctttgagatcaagttgcac
tggatggctgtcactgctgcagtgctctttgagatggttcaaatgtggcaccggaaagct
gcgtcctgcggcttcctgttggtccctgtgctggaggttccttttgctctgacgtcttac
ctgtgcggagatccactgagagcgcagctcttcatccctctgaacatccactgtctgctg
aagaacagcagcgacaacctgttcgaaggttttgaacccgagacgtactgggacaggatg
cagctctttcaggaggccatactgtacagatttggctttgtgcacgacaagtattctgct
tctgcttttaatttcccgtctgacaacaagccccagtacatccacgtaacaggcaccgtg
ttcctgcagctgccgtactccaagaggaagtactcgagcgggcagcagcgccgacgcagg
aactccaccacctccaacagccaggggccttttggcggcgaggagcgggtcggttactac
tgggcctacaacaccatgctgaccaaggcctggaggacgggcgtgctgggcgacgagagg
ctcgcagaccgcctgctcagagacttcacagacttctgcgccaacaaggacaaccgactg
ctccacctgtgggacagctgccaggagaagatgaacgccagcgctccctga
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integrated database retrieval system
