Perca flavescens (yellow perch): 114564924
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Entry
114564924 CDS
T07494
Name
(RefSeq) nucleoprotein TPR-like
KO
K09291
nucleoprotein TPR
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114564924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflv03019
]
114564924
Messenger RNA biogenesis [BR:
pflv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114564924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
GAS
Motif
Other DBs
NCBI-GeneID:
114564924
NCBI-ProteinID:
XP_028448404
LinkDB
All DBs
Position
12:28400052..28431220
Genome browser
AA seq
2503 aa
AA seq
DB search
MAAVLLQVLERTELNKLPKGAQNKLEKFVTELQNANEALRTQHERFKADSEQQYFDIDKR
LAESQEQILSATRDLQTLKEENKKLNEELSTLKGIEGETSEDKPPQEQTKAKYEIEAEKR
ELARMLEKRTQEVENLSEDVKRLNEKLTETSKVKMELQLKLDDVQSSEASVQHREKRMEQ
EKELQEKKIEWLTTQLKTKTEELLNTNREKGKEILELQGGLRNSKEQVTRLERQLTSLKQ
TSESQSKRAEDLNNKLKQSKDEQSSMEEKYRNELNAHIKLSTLYKGAATDMETKNQELSR
AVEELSKLVKETGEANKALEKKVSEGEELKKRLEAELGEKVKKMEKELENATMKVAGKHC
CVRPLSEEQLDTMCPSAAAIAAIVKPGMKFFDLYNAYAECQTHLQLEKQETRRVSRVLDE
IVQEIESKAPVLKRQREEYESMQRSMASLCNKLEQARTEIYSLQKEKEEAKQRCDTMERD
KMRLERQLEDTSAQVCSLLVDLEEARGNQVTKEDGSSANISSTSEVISPRQLSFRSVEEL
QRQNQSLLSRLRQLEEEKDRQQSQVTSARVSELEASVEKLEKEVEQLKEQRNQQKQLADS
NARQRDMYKVLLTQSTGFSLPTQGSDSSSHPAHIRPSVPATRSTPQRAAAAESAQTAQAK
AALKQLNDAFTLYKKEKAENDKMSNETNDRLQKQLTDLRSSHAKLTSQLEFSSKRYEMLQ
DTVSAYRREISALQDRNQKMAATAQRHEHIIHTMSQDLRQANEKLALEEVRVENVSKERD
MLRQAESRLNREKEAMLAEQRNQNLLLTNLKTIQLTMERTETETRQQLNNKIEHVEAELS
SMKTRLDQEVAQRHALGRTMDAQLLEAKKQLETQNTLQQKTRELLRSSEQQVAALKAQLA
SASSEAVTTPSNTANPATRAAGLRAPLRVRSPGPAASQQLSQSEQELAELKGLLRTAEEQ
NNELAEQLKNANATVEQYRAVVLTLEDSLKKEKESRSPLELRLKESQEVQKQLEKRILEL
EKMKQQEREERRKAVDAVEKQMYEVQRSLKSSQAEQQEALERATSAVTLEQKAIQESLLQ
TKLAGEAQAKYERELMLHAADVEALQELKKKNQQDAAQKRELEEQLSKISSLLQEKAAAL
NTVERQLKEDLSIKSRRCEELGKQNALLHQQMDEMATKGRLLQNQPQQLDLSFSEEGKTT
EQILEILRFVRSEKEIAVARCDASDREALRYKQRVEHQDRQLKDLEESLNSEREKMQATA
KTLAQQEEQLKKMENIGALQETNRMLKMDRDKLEQELQQAQAKVTKLQSDISPLHHSLSQ
LSERNGSLQADKRILEEDLKRWKAKTQQLLSQQKDGDVEERQKLATEKEAQQKRITQLAE
ETAKLKTELARSSASSNSAQSQLQALRDSVARLTSERDTLKKDLETKNTDILEKNKTITQ
VKKIGRRYKTQYEELKVQHDKLVEETAAKAGSEAGPSQEVQQELTKTQEERNKAREELNT
LKAELQKKLEEAQKSQQEFEEYRKENQQTVEKLQETETRLQQNQNLLTQAQKDLQQTKTH
SQQVQNQLKSAQSQAQARQNQIQQIQKELQQAKEALQQNLANQKELQQTQQSSQQSHNQE
VGNIKTALSQAESKVTDLQSQLDSLQKIIGEREADIKRLQEQLSEANQANEASRATQANQ
SQSSPSIQASDANVASDGNQALQEELAKLRQELSESKTREEQLRQQIAEKEEKTKKVFMG
AKTKINQLNSAKEKLTQEIQEVKQSKEELEVRMNALKSQYEGRLLRLDRELRELRETQPQ
SDPREEPQDQSGAKVGDQTRSADQRQISLKSPAQDRGSSSLSDPPTANIRPTTSTPSPSN
KPSPSPGNKATPRASIRPMVTPATVPIPTPTATVMPTTQTDSQEVLMSAGASVHSTSSSL
VNTATSITQPTSTQATAFVQPTQQQAANQDAGPSVEAERPSTSSSLGGTGSKRGREDEEE
ESRPESSHTPPTTKKLRLKPTIALQMEGDEEIEGELRDEGERQDSPDDSQELPEDCYPNL
AEDDEDIEEVSQSVPSDMMSSQGSAIVRDVIVIDTDSESRESKEGEEKQEDEGEEEEEEE
EEEDEEEEGYKEEEEEDEDEDDAGDSGIRGGEESNEESREAEEGAGEDEPSEASNAEDNV
CGASSDSQRPSEPSHSNEGSSSATSESEPPRDPVHFPPTSSPSAPSPSSSITPRLPHPRR
PPHPLPPRLYIQPPAPELGPPHTQRQSSQLRRPSVGRGPQLTPGIGSMQHFFDDDDRMVP
STPTLVVPHRTDGFAEAIHSPQVAGLSTRFRFGPPEDLLPQTSASHSDLGQLASQGGLGM
YESPLFLAAHDEDGGGRSVPTTPLQVAAPVTVFTESLPSDSGDNMASQSVPMVTTSTGMA
SAADDGDEVFMEQEGEGPGIESSMESQTDMESTGQQNDDASLPSTSQDPDNSSGTQRRTV
SSLISSLSGRGTRGGRVEARTLLTRRGTFSRGRGGAMGRGGIA
NT seq
7512 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtcctgctgcaggttctggagcggacggagttaaataaactcccgaaaggc
gcccagaacaagctcgagaagtttgtaacggagctgcaaaatgctaacgaggcgctcagg
acgcagcatgagcggttcaaagcagacagtgaacagcagtactttgacattgacaagaga
ctggcagaaagtcaggaacagatcctgtcagccaccagagacctgcagacactcaaggag
gaaaacaaaaaactcaatgaagagctgagcactctgaagggaatagagggagagacctct
gaagataaaccaccacaagagcaaaccaaagccaagtatgagattgaggcggagaagaga
gagctggcgaggatgctggagaagagaacacaggaggtggaaaacctcagtgaggatgtg
aagcgtctgaatgagaagctgacagagaccagcaaagtgaagatggagctgcagttgaaa
ctggatgatgtccaatcatctgaggcttctgtacagcaccgagagaagcgaatggagcag
gagaaagagttacaggagaagaaaatcgagtggttaactacacaactgaagaccaaaact
gaagaactgttgaacactaacagagagaaaggcaaagagatactggaactacagggtggt
ctgaggaacagcaaggagcaggtgaccaggctggaaagacaactcacctctctgaagcaa
accagtgaaagtcagagtaaaagagccgaagacctcaacaacaaactgaaacagtctaaa
gacgagcagagttccatggaggagaaataccgcaatgagctcaacgctcatatcaagttg
tcaaccctgtacaagggggcggcgacagacatggagacaaagaatcaagaactgagcaga
gcagtggaagagctcagcaagctggttaaagaaactggggaagccaataaggctctagaa
aagaaggtgtcggagggagaagaactgaagaagcggcttgaggcagagcttggagagaag
gtcaagaaaatggagaaggagctcgaaaacgccacaatgaaggttgctggcaaacactgc
tgtgtgcgccctctgagtgaggagcagttggacaccatgtgtccatcagcagctgccatc
gctgccattgtcaagcccggcatgaagttctttgatctgtataatgcgtatgcagaatgt
cagacacaccttcagcttgagaagcaggagaccaggagagtgagcagagttctggatgag
attgtacaggagatagagtccaaggctcctgtcctcaagcgtcagcgagaggagtacgag
agcatgcagagatccatggcctctctgtgcaacaagctggaacaggctcgaacggagatc
tacagtttgcagaaagagaaagaagaggccaagcagcgctgtgataccatggagagagac
aaaatgaggctagagagacagctagaggatacatctgcacaggtgtgttctcttctggtg
gatctggaggaagccagagggaaccaggtgaccaaggaagacggcagctccgccaacatt
tccagcacctctgaggtcatcagtccacgccagctgtccttccgcagtgtggaggagctg
cagaggcagaaccaaagtctgctgagcaggctgaggcagctggaggaggaaaaagacaga
cagcagagccaagtgacatcagcgcgtgtgtcagagttggaggctagtgtggaaaagctt
gagaaggaggttgagcagctgaaagagcagaggaaccagcagaaacagctggctgactcc
aacgccagacagagagacatgtacaaggtcctgctgacacagagcaccggcttcagcctg
cctactcaaggttcggattcttcatcccacccggcacacattaggccttcagtcccagct
actcgctctactcctcagagagctgctgctgctgagtcagcacagactgctcaggctaaa
gctgctttaaaacagctgaatgatgccttcactctgtataagaaggagaaggcagagaac
gacaagatgtcaaatgagacaaacgacaggttacagaagcagctgacggatcttcgctcc
agccacgccaagctgacctctcagctagagttcagcagcaagaggtacgagatgctccag
gacaccgtatcagcctatcgcagagagatctctgccctgcaggacaggaaccaaaaaatg
gctgcaacagcccaacgacatgagcacatcattcacacaatgagccaggacctccgacag
gctaacgaaaaactggcactggaagaggtgcgagtggagaacgtgtctaaagagagagac
atgttgagacaagcagagagtcgactcaatcgagaaaaggaagccatgctggctgagcaa
cgtaaccagaatctgctgctcaccaatctcaagactatacagttgacaatggagcgtaca
gagacggagactcgccagcagctgaacaacaagatagagcatgtggaggcagaactgtct
tcaatgaagaccaggctggaccaggaagtagcacagagacatgcccttggacgcaccatg
gacgctcagttattagaggctaaaaaacagctggagacacagaacaccttacagcagaag
accagggagttgttgcgtagctctgagcagcaggtggcagcactgaaagcccaactggct
tctgcttcctctgaggctgttaccacccccagcaacacagccaaccctgctaccagagct
gccggcctcagggcaccacttagagtacgctctccagggcccgcagcctcccagcagctc
agccaatcggagcaggagcttgcagagttgaaaggtcttctgcgtactgctgaggaacaa
aacaacgaactagcagagcagctaaagaatgccaatgctactgtagagcagtacagggct
gtggtactgactctggaagacagtctgaagaaagaaaaggagtctcgctcccctcttgag
ctccggctgaaggagtcccaggaggtgcagaagcagctggagaagaggattttagagttg
gagaaaatgaagcagcaggagagagaagagaggagaaaggctgtggatgcagtggaaaaa
caaatgtatgaggtgcagcgcagtctgaagtccagccaggcagagcaacaggaggcactg
gagagagctacctctgctgttacactggagcagaaggccatacaggaaagcctcctgcag
actaagctagctggagaagcacaggccaagtatgagcgggagctcatgcttcatgctgct
gatgtagaggccctgcaggagctgaagaaaaaaaaccagcaagatgcagcacagaagagg
gagttggaggagcaactgagcaaaatctcgtccctcctgcaggagaaggctgcagctttg
aacaccgtggagagacagctgaaggaggatctgtctattaagagtcgtcgttgtgaggag
ctggggaagcagaatgctctcctgcaccaacagatggatgaaatggccaccaagggtcgt
ctgctgcaaaaccagccacagcagctcgacctgtcattcagtgaagagggcaagaccact
gaacagatactagaaatactcaggtttgtgcggagtgaaaaggagattgctgtggctcgg
tgtgacgcgtctgatagagaagctcttcgctacaaacagcgagtggaacaccaagacaga
caactgaaggatctagaggaatctctgaactctgagcgggagaaaatgcaggctacagcg
aagactctggcccagcaggaggaacagctgaagaagatggaaaatattggtgctctccaa
gaaaccaacaggatgctgaaaatggaccgagataaactggagcaagagctgcaacaagct
caggctaaagttacaaagctccagtcagacatcagcccactacatcactctttatctcag
ctgtcagagagaaatggctccctgcaagctgataagaggatactggaagaagacctcaaa
cgctggaaggccaaaacacagcaactgcttagccaacagaaagatggtgatgttgaggag
agacagaaactcgccactgagaaagaagctcagcagaaacgcatcacacagctagctgaa
gagacagccaagctgaagactgaactggcaagatccagtgccagcagtaactcagctcag
tctcagctgcaagccctcagagactcggtggcccgtctgacgtcggagagagacactctg
aagaaagacctggaaacaaaaaacaccgacattctagagaagaacaagaccatcacccag
gtcaagaagattggacgacgctacaagacccagtatgaggagctcaaggtccagcatgac
aagctggttgaggaaacagctgctaaagcaggaagtgaggcaggtccaagccaggaggtg
cagcaggagctgactaaaacccaggaggagcgcaataaggccagagaggagctaaacaca
ctgaaagcggaattgcagaaaaaactggaggaggcccagaagtcccagcaggagtttgag
gagtacaggaaggaaaaccagcagaccgtggaaaagttgcaggagaccgagactcgactg
cagcagaatcagaacctgctgacccaggctcagaaagaccttcagcaaaccaagacccac
agccagcaggtacagaaccaattaaaatcggctcagtctcaagcgcaggctcgtcagaac
cagattcagcagatccagaaggagctccagcaggctaaagaagcccttcagcagaacctc
gctaatcaaaaagagctgcagcagacccaacaaagcagccaacagagccacaaccaggaa
gtcggcaacatcaagactgctctcagccaagcagagagcaaggtgactgatcttcagagc
caactggacagcctgcagaagataattggtgagcgtgaagcagacattaagcgtctgcag
gagcagctttctgaagccaaccaggctaatgaagctagccgagccacacaggccaaccag
agccagagttccccgtccatccaagccagtgatgctaacgttgctagtgacggtaaccag
gccctacaagaggagctggctaaactcagacaagagctgtctgagagcaagaccagagag
gagcagctcaggcagcagatagctgaaaaagaggaaaagactaagaaggtcttcatggga
gccaaaaccaaaatcaaccaactaaacagtgctaaagagaagctcactcaggagatacaa
gaagtgaaacagagtaaggaggaactggaggtgagaatgaacgccctgaagtctcagtat
gaaggacggcttcttcggctggacagagagctgagagaactgagagagacgcaaccacag
tccgaccctagagaggaaccacaggaccagagtggagctaaggtgggtgatcagaccaga
tctgcagaccagagacagatatctttgaagagtcctgcccaagacagggggagctccagc
ctgtctgaccctcccactgccaacatccgccccacaacaagtactccatctcctagcaac
aagccaagcccctcccctggtaacaaggccacgccccgtgccagcatccggccaatggtt
accccggcaactgtccccatcccaacacctactgccacggtcatgcctaccacacagact
gacagccaagaggtgctgatgagtgcaggagcctctgtacactctaccagctccagtctg
gtgaacacggccacatcaataactcagccaaccagcactcaggccaccgcttttgtccag
cccactcagcagcaggcagccaatcaggatgcaggccccagtgtggaggcagaacgacca
tctacgtcctcttctctgggtggaacaggttcaaagcgaggccgagaggacgaggaagag
gagagcagaccagagagttcacacacacctccaacgacaaaaaaactaagacttaaacca
acaatagcactacagatggaaggtgatgaggagattgaaggagagctgagggatgaagga
gaacgacaggattcgccagatgacagtcaggagcttccagaggattgttaccccaattta
gctgaagatgacgaagacatcgaggaagtgtcccagtctgtcccctccgatatgatgtcc
tctcagggctccgctattgttcgggacgtcatcgtgatcgatacggacagcgagagccgt
gagagcaaagagggggaggagaagcaggaggacgaaggtgaagaggaagaggaggaggag
gaggaagaagacgaagaagaagaagggtataaggaagaagaagaggaggatgaagatgag
gatgatgctggtgacagcgggataaggggaggagaggagagtaacgaggagagcagggag
gcagaagaaggagcaggggaggatgagccatccgaagcctccaacgctgaggacaatgtg
tgtggagcctcttcagactcgcagcgtccctctgagccgtcccacagcaatgaaggcagc
agtagcgccacatcagagtccgagccccccagagaccctgtacacttccccccaacctcc
tccccctctgcaccctccccctcctcctccattacaccccgcctgccccacccacgtagg
cccccacaccccctccctccacggctctacatccaacctccagctccggagctgggaccc
ccacacacacagagacagtcctctcagctgcgcagaccatcagtaggacgcggacctcaa
ctaacccctggaataggcagtatgcaacatttcttcgatgatgacgaccgaatggttccc
agtactcccactctggtagtcccacaccgcactgatggctttgctgaagctatacattct
cctcaggtagctggtctgtccaccaggttcaggtttggacctccagaagacctgctgcct
cagacatcagcctcacactctgacctgggacagcttgcctctcaaggaggtctggggatg
tacgagtctcctctcttcctggctgctcatgatgaagacggaggaggaaggagtgtcccc
accacgcctttacaagtggctgcaccagtgacggtcttcacagagtctctgccctcagac
agtggtgacaacatggcatcccagtcggttcccatggtaaccacctccaccgggatggct
tctgctgcagatgatggcgatgaagtcttcatggagcaggaaggagagggtcctggtatt
gaatcctctatggagagccagacagacatggagtcaacaggacagcagaatgatgatgca
tcactgccatctaccagccaagatcctgacaacagcagtggtactcagcggcgcacagtg
agcagtctgatcagcagcctgtcaggcagaggaaccagaggagggagagtcgaggccagg
acgttactcacccgcagaggtactttctctcgtggaaggggaggagccatgggcagaggg
ggcatcgcctaa
DBGET
integrated database retrieval system