Perca flavescens (yellow perch): 114564972
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Entry
114564972 CDS
T07494
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflv04131
]
114564972
Membrane trafficking [BR:
pflv04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
114564972
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
LRR_EndoS
Ig_2
LRRNT
LRR_LRWD1
LRR_6
LRR_9
V-set
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
114564972
NCBI-ProteinID:
XP_028448506
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All DBs
Position
12:5664378..5715997
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AA seq
622 aa
AA seq
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MIGSPGSGGRALVPWPRMWRWVLAASLVAVITLTLPGSGQACPPRCECSAQLRSVSCQRR
RLINIPEGIPTETQLLDLSKNRLRWVQAGDLAPYPRLEEVDLSENLIATLEPNAFATLQS
LKVLKLRGNQLKLVPLGAFAKLGNLTSLDLSENKMVILLDYTFQDLRSLKHLEVGDNDLV
YISHKAFSGLLGLEDLTIERCNLTSISGQTLSYLRSLVTLRLRHLSIVALEDQNFRKLSN
LRGLDIDHWPYLEYISPVSFQGLDLHCLSITNTNITSVPSASFKNLVHLTHLNLSYNPIS
TLEPWAFKDLLRLKELIMVSTGLMTVELHAFGGLRQIRVLNFSSNDLQTLEEGSFHSVNS
LETLRVDGNPLMCDCRLLWILQRRKTLNFDGRVPVCAGPVEVQGVSLSAFTDSALFDHFT
CQKPKIRNRKMQQVVAREGQPVSFLCRAEGEPAPSIVWISPQRRRITAKSSGRITVLPSG
TLEIRYAQLTDSGTYICIASNAGGNDTYFATLTVRGQPLDAASAFFLNRSLYSGEFFNDT
NLNSTRVYLKFTLDLTTILVSTAMGCITFLGVVLFCFLLLFVWSRGRGQRKNNFTVEYSF
RKSEPVTGSSSGGTRKFNMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgattggctctcctggctctggtgggcgtgccttagtgccatggccgaggatgtggcga
tgggtcctggctgcttctctggttgccgtgataaccttgacgctgccaggaagtggccag
gcctgtccgccacggtgcgagtgctcggctcagctgaggtcggtgtcgtgccagcggcgg
cgcctcatcaacatcccagagggcatccccaccgagacgcaactcctggacctcagcaag
aaccggctccgctgggtgcaagcaggagacctggcaccgtacccgcggctggaggaggtg
gacctcagtgagaaccttatcgccacattagagcccaatgccttcgccaccctccagagt
cttaaagtcttgaagttaaggggaaaccagctgaagttagtgcccctgggggctttcgcc
aagctgggcaatctgaccagcctggacctgagcgagaacaagatggtgattttattggac
tacaccttccaggatctgaggagtctgaaacatttggaggtgggagacaacgacctggtt
tatatttcccacaaggcattctcagggctgctggggctggaggatctcacaatagagcgc
tgcaacctgacatccatctctggccagacgctgtcctacctgcgcagcctggtcaccctt
cgcctccgtcatctcagcatcgttgccctggaggaccaaaacttccgaaagctctccaac
ctgcggggtctggacattgatcactggccgtacctggagtacatctcccctgttagtttc
cagggcctggacctccactgtctctccatcaccaacaccaacatcacctctgtcccctcc
gcttccttcaaaaacctggtgcacctcacacacctcaacttgtcctacaatcccatcagc
acactagagccctgggccttcaaggacctgctgaggctgaaggagctcatcatggtaagc
acagggttgatgacagtggagctccatgcctttggaggccttcgacagatccgagttctc
aacttctcctccaacgacctgcaaactctggaagagggctccttccactctgtcaacagt
ctggagaccctcagagtggatgggaaccccctgatgtgtgactgccgtctgttgtggatc
ctgcaaagacgcaagaccctcaactttgacggcagagtgccggtgtgtgcggggccggtg
gaggtgcaaggggtcagcctcagcgccttcaccgattctgcactcttcgaccactttaca
tgccagaaacctaagatacgcaaccgtaagatgcagcaggtggtcgctcgtgagggccaa
ccggtgagttttctgtgtcgagccgaaggagaacctgcaccttctattgtctggatttcc
ccgcagcgcagacggatcacagctaagagttcagggcgcattaccgttctccctagtggc
accctggagatccgctacgcccagcttaccgacagcggaacatacatctgcatcgccagt
aacgccggaggcaatgacacctactttgccacactcacagtgcgtggccagccgctggat
gctgcctcagccttctttctcaaccgctcgctgtacagcggcgagttcttcaacgacaca
aatctgaacagcacgcgcgtttatcttaagttcaccttggacctgaccaccatcttggtc
tccacagcaatgggttgcatcacgttcctgggggtggttctcttctgtttcctgctgttg
tttgtgtggagccggggacgcgggcaacgcaagaacaacttcacagtggagtactccttc
cggaaatctgaacccgtcacaggcagctcctcgggagggaccaggaagttcaacatgaaa
atgatatga
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