KEGG   Perca flavescens (yellow perch): 114564995
Entry
114564995         CDS       T07494                                 
Symbol
vim
Name
(RefSeq) vimentin
  KO
K07606  vimentin
Organism
pflv  Perca flavescens (yellow perch)
Pathway
pflv04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pflv00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    114564995 (vim)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pflv03019]
    114564995 (vim)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pflv04812]
    114564995 (vim)
   04147 Exosome [BR:pflv04147]
    114564995 (vim)
Messenger RNA biogenesis [BR:pflv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     114564995 (vim)
Cytoskeleton proteins [BR:pflv04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     114564995 (vim)
Exosome [BR:pflv04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   114564995 (vim)
  Exosomal proteins of other cancer cells
   114564995 (vim)
SSDB
Motif
Pfam: Filament Filament_head FKBP15 DUF7491 CCDC39 TolA_bind_tri KIF21A_4th Laminin_II DUF1664
Other DBs
NCBI-GeneID: 114564995
NCBI-ProteinID: XP_028448559
LinkDB
Position
12:complement(18033585..18041699)
AA seq 451 aa
MSYRTAPQSSYKKMFGGERVSTRISYSSRQYSSPVRSSRVSYGLSSSSAKTQRLRSSAAM
PRLASENLDFSLSDAINSEFMTNRTNEKAQMQSLNDRFANYIDKVRFLEQQNKILLAELE
QLRGKGTSRVGDLYEDEMRELRRQVDQLSNEKARVEVHRDNLADDIDRLREKLQDEICQR
EEAEGSLHSFRQDVDNAALARLDLERKVESLQDEINFLKKLHDEEMLELQTQIQQQQHVQ
VDMEMVKPDLTAALRDVRLQYENLASKNIHESEEWYKSKFADLTEAAARNNDALRLAKQE
ANDYRRQVQSLTCEVDALKGTNESLDRQMREMEENFSLETSGYQDTVGRLEEDIQNMKDE
MARHLREYQDLLNVKMALDIEIATYRKLLEGEENRISTPLPNFSSLNLRETMSDLKPHFE
ATKTKKVLIKTIETRDGQVINESTQNHDDME
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgtcttatagaacagctccacagtcttcttacaagaagatgtttggcggggagagagtc
tcgaccaggatcagctactccagccgccagtactccagcccggtgcgctcctcccgggta
tcctacggtctctcctcctcctccgcgaagacccaaaggctccggagcagcgcagccatg
ccccggctggcctccgagaacttggacttctccttgtccgacgccataaacagcgagttc
atgacgaaccgcaccaacgagaaagctcagatgcagtcgctcaatgaccgcttcgccaac
tacatcgataaggtccgcttcttggagcagcagaacaagattctgctggcggagctggag
cagctgcggggcaaaggcacgtcccgggtcggagatctgtacgaggacgagatgcgggag
ctgaggcgccaggtggaccagctcagcaacgagaaggcccgggttgaagttcaccgggat
aaccttgcagacgacatagacaggctgagagagaagttgcaggatgagatatgccagcgg
gaggaggctgagggcagcctgcatagcttcagacaggatgtggacaatgctgcccttgcc
agattagacctagagcgaaaggttgagtcactccaggatgaaatcaacttcctcaagaag
ctgcatgatgaggaaatgctggagctgcaaacccagatccagcagcagcagcatgtgcag
gtggacatggagatggttaaacctgaccttacagctgctctgagggacgtccgtctgcag
tatgagaacctggcctccaaaaacattcatgagtctgaggaatggtacaaatccaagttt
gctgacctcaccgaagcggcagccaggaataatgatgccttgcgactggccaagcaagag
gccaatgactataggcgccaagttcagtcacttacttgtgaggtggatgcccttaaagga
actaacgaatccttggaccgccagatgagagagatggaggagaacttctcactggagacg
agcggttaccaggacaccgttggccgcctggaggaggacattcagaacatgaaagacgag
atggcccgtcacctccgggagtaccaggacctcctaaatgtcaagatggccctggacata
gagattgccacctacaggaagctgctggaaggagaggagaacagaatctccaccccactg
ccaaacttctcatctctaaacctgagagaaacaatgagtgatttaaaacctcattttgaa
gctacaaaaactaagaaggttctcatcaagacaattgagaccagggatggtcaggtgatc
aacgagtcaacccagaaccacgatgacatggagtaa

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