Perca flavescens (yellow perch): 114564995
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Entry
114564995 CDS
T07494
Symbol
vim
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
114564995 (vim)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflv03019
]
114564995 (vim)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pflv04812
]
114564995 (vim)
04147 Exosome [BR:
pflv04147
]
114564995 (vim)
Messenger RNA biogenesis [BR:
pflv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
114564995 (vim)
Cytoskeleton proteins [BR:
pflv04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
114564995 (vim)
Exosome [BR:
pflv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
114564995 (vim)
Exosomal proteins of other cancer cells
114564995 (vim)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
FKBP15
DUF7491
CCDC39
TolA_bind_tri
KIF21A_4th
Laminin_II
DUF1664
Motif
Other DBs
NCBI-GeneID:
114564995
NCBI-ProteinID:
XP_028448559
LinkDB
All DBs
Position
12:complement(18033585..18041699)
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AA seq
451 aa
AA seq
DB search
MSYRTAPQSSYKKMFGGERVSTRISYSSRQYSSPVRSSRVSYGLSSSSAKTQRLRSSAAM
PRLASENLDFSLSDAINSEFMTNRTNEKAQMQSLNDRFANYIDKVRFLEQQNKILLAELE
QLRGKGTSRVGDLYEDEMRELRRQVDQLSNEKARVEVHRDNLADDIDRLREKLQDEICQR
EEAEGSLHSFRQDVDNAALARLDLERKVESLQDEINFLKKLHDEEMLELQTQIQQQQHVQ
VDMEMVKPDLTAALRDVRLQYENLASKNIHESEEWYKSKFADLTEAAARNNDALRLAKQE
ANDYRRQVQSLTCEVDALKGTNESLDRQMREMEENFSLETSGYQDTVGRLEEDIQNMKDE
MARHLREYQDLLNVKMALDIEIATYRKLLEGEENRISTPLPNFSSLNLRETMSDLKPHFE
ATKTKKVLIKTIETRDGQVINESTQNHDDME
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatagaacagctccacagtcttcttacaagaagatgtttggcggggagagagtc
tcgaccaggatcagctactccagccgccagtactccagcccggtgcgctcctcccgggta
tcctacggtctctcctcctcctccgcgaagacccaaaggctccggagcagcgcagccatg
ccccggctggcctccgagaacttggacttctccttgtccgacgccataaacagcgagttc
atgacgaaccgcaccaacgagaaagctcagatgcagtcgctcaatgaccgcttcgccaac
tacatcgataaggtccgcttcttggagcagcagaacaagattctgctggcggagctggag
cagctgcggggcaaaggcacgtcccgggtcggagatctgtacgaggacgagatgcgggag
ctgaggcgccaggtggaccagctcagcaacgagaaggcccgggttgaagttcaccgggat
aaccttgcagacgacatagacaggctgagagagaagttgcaggatgagatatgccagcgg
gaggaggctgagggcagcctgcatagcttcagacaggatgtggacaatgctgcccttgcc
agattagacctagagcgaaaggttgagtcactccaggatgaaatcaacttcctcaagaag
ctgcatgatgaggaaatgctggagctgcaaacccagatccagcagcagcagcatgtgcag
gtggacatggagatggttaaacctgaccttacagctgctctgagggacgtccgtctgcag
tatgagaacctggcctccaaaaacattcatgagtctgaggaatggtacaaatccaagttt
gctgacctcaccgaagcggcagccaggaataatgatgccttgcgactggccaagcaagag
gccaatgactataggcgccaagttcagtcacttacttgtgaggtggatgcccttaaagga
actaacgaatccttggaccgccagatgagagagatggaggagaacttctcactggagacg
agcggttaccaggacaccgttggccgcctggaggaggacattcagaacatgaaagacgag
atggcccgtcacctccgggagtaccaggacctcctaaatgtcaagatggccctggacata
gagattgccacctacaggaagctgctggaaggagaggagaacagaatctccaccccactg
ccaaacttctcatctctaaacctgagagaaacaatgagtgatttaaaacctcattttgaa
gctacaaaaactaagaaggttctcatcaagacaattgagaccagggatggtcaggtgatc
aacgagtcaacccagaaccacgatgacatggagtaa
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