Perca flavescens (yellow perch): 114565025
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Entry
114565025 CDS
T07494
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03013
Nucleocytoplasmic transport
pflv03015
mRNA surveillance pathway
pflv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114565025
09122 Translation
03013 Nucleocytoplasmic transport
114565025
03015 mRNA surveillance pathway
114565025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflv03019
]
114565025
03041 Spliceosome [BR:
pflv03041
]
114565025
Messenger RNA biogenesis [BR:
pflv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114565025
Spliceosome [BR:
pflv03041
]
Complex C
Other components
EJC/TREX
114565025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
114565025
NCBI-ProteinID:
XP_028448622
LinkDB
All DBs
Position
12:complement(24895348..24916945)
Genome browser
AA seq
1760 aa
AA seq
DB search
MADLEDVTLDGRPLQSLRVADLKAALEERGLSKSGQKNALIKRLKGALMLENLQRTSTAH
IGLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLEREAREAYDTNEPEDHTEVNNSTSCP
PQAQDATPALAEQHKPPGPSGGEGLFGAVNEGEGNRNQEADMSGPPASGSVAMHVPGGEH
RPEKGSASNKVAADSDDDDSEDGEEDGDDDDWESGARRRGHREPAKVPTTRERSGASCQP
PQQHMPSLLSPQLRQPTPPPSPPPELSFPLPDTPKQSPPSPDVAPARRSSSTSSSGSSSS
GSRSSSPEPQRSGHAERKPGPLTLLARKMASEGAFSGAGWHRGAGEGDRQDSSTPATSFP
GRGHPEGLVSAITHTANTAGHVSFPMISGTHQGITGAHSAHIQVPVSLLKATAAEERDRE
RDSEIEREKALELERQEKQRKLEQERAIEEERERALALEREERERALEKERIERQQALER
EEREKALQRERELALERERQERELALERERQERELALAKEREAREQALAQERALELERQK
ELERQRALEHERLQREKEEREKREREEMERAMELERAKALEQEKKERERALEQERLQREI
ALEAERKEKERIEREKALEQERLEREKALEQERLEREKALEQERLEREKALEQERLEMER
ALEKERLEKEKAIEQERIEREKAIEQERIEKEKALEQERIEREKALERERIEREKERLER
ERALEQRLEQERKEKERIEREKALEQERIEREKTLQREKEEKERLEREAALEQVRKEKER
AEKERKERLEREKALEQEKLEKERALEKERALEQERLKKEKAMQKEKEEQERAVEQEKER
ARGTEKDRESHLPPSKRGREIGLTPLPTPPPLSTGPGRKSSTEAGEQEDVHAPMSQREAA
ESGAPMPATLPLPQSSFKKFRFLRDSPIQLQSSSPSMVIKRPRNFSDTPQPRASHVSSLT
DVGERQQEGLPSSTEQDDPQMRTKQEVVSGAPGSEGAQPEKETTVNTALVPSPKKEGATS
LVLEDKDKADSVKSEQAAKESTKKAKEVDESKGPTNPVDTAQRRGRDANKEEKQVRQRSS
SNDSSSSESDSGSSSSRSSGSSTSSQEKTCSTSRGRREGKPKRDSSPQHRVTQEAHAEGL
KETPKASPGKREMSVEKSNTTADGDSHTKKLFIEAPTREASQRKSKDNEREAETDKQRQL
KETAMAEPEKLPETSEETPKAFSARKISISSSKSSPGTGSAEGEQDPGAAAGRKRRWGSS
TAVTAKKPSISITTDSLKSLIPDIRPCLGQEAIVDLHPEEAVLSGAEDEERECSDQDLQI
RRTVTQVVHSESQENGEKETKRSRHEELEEDDPQGDREMTTRVNEEKMDTAFPGAVETQS
PSHTSHDVETNTVTPSETLIRRSISQQKTGVSITIDDPVRTARQPSPPRGKVSNIVHISN
LVRPFTLGQLKELLGRTGTLVEEGFWIDKIKSHCYVTYGSSEEAVATRAALHGVKWPQSN
PKVLNVDFCQQDELDFHKGLGVAGKPGAEERAPGSGRGRTSALPSLLPERDQWAEREREM
ERREKARAEREWDRDKVKEFGKTGEEKEEGPRRSRSRERRRKERGKSKEKKTEKKEKMAE
DPPAKLLDDLFRKTKAAPCIYWLPLTEEQYVQREAAKAERMKEREKRRKEQDEEEEKKRE
EERKERVKAGGGPTGERSEGEKEKDRDRERDRDRGRDRDRERERERENDKRRDGYRRPEG
RGAGVGRRSRSRSDPRERRR
NT seq
5283 nt
NT seq
+upstream
nt +downstream
nt
atggcggatctcgaagacgttacgctggacgggagaccgctacagtcccttcgagtagcg
gatttaaaagctgctcttgaggaaagaggactctcgaaaagcgggcagaagaatgcttta
atcaaaagactcaaaggggctctcatgctggagaatctgcagaggacctccaccgctcac
atcggactgcagccaaactcacagattggtgaggaaatgagccagaacagcttcatcaag
cagtatctggctaaacaacaggagctcctgaggcagcggctggagagagaggctcgtgaa
gcatatgacacaaatgagccagaggaccacacagaagtcaataacagtacatcatgccct
cctcaagcccaggatgccacgccagcattggctgagcagcacaagccacctggcccctct
ggtggagagggattgtttggtgcagtgaatgagggagaaggtaacaggaaccaggaggct
gacatgtccggtcctcctgcttctggctctgtggccatgcatgttcctggtggtgagcac
cggccagagaaggggtctgcctccaacaaagttgctgctgacagcgacgatgacgatagt
gaggatggcgaggaggatggtgacgatgatgattgggaaagcggtgctcgaaggagaggc
cacagagagccagccaaagtgcccacgaccagagagaggtctggagcatcctgtcaaccc
ccgcagcagcacatgccttcccttttgtcccctcaactccgccagccgacacctcctccc
tccccacctccagagttatcattccccttgcctgacacccctaaacagagcccccctagt
ccagatgtagccccagctaggcgctcatccagtacctctagctctggttcatccagcagc
ggcagccgcagtagcagcccagagccacagaggagtggacatgcagaacgcaagccgggc
ccgctgacccttctggcacgtaaaatggcttcagaaggtgctttttcgggagcaggttgg
caccgcggcgctggggaaggtgataggcaggacagcagtactccagctacatcatttcct
ggcagaggtcatccagagggtctggtatctgccatcactcacacagccaatactgcaggc
catgtgtcatttcccatgatttcaggcacccaccagggtatcacaggagcacattcggcc
catattcaagtacctgtgagtttgctcaaagccactgcagcagaagagagggacagagag
agggactctgagatagaaagagaaaaggcccttgagctggaaaggcaagagaagcagaga
aaacttgagcaagaaagagcaattgaggaagagcgtgaaagagctcttgcactggagaga
gaggaaagagagagagctctggagaaagagagaattgaacgtcagcaggccttagaaaga
gaagaacgagaaaaggctttgcagcgggagagagaacttgctctagaacgagagaggcag
gagagagaacttgctctagaacgagagaggcaggagagggaactagctttggctaaagag
agggaagcgcgagagcaagccttagcacaagagagggccctggagctggagaggcagaag
gagcttgaaagacagagggccctggagcatgaacgtctgcagagagaaaaggaggagagg
gagaagcgagagagagaagaaatggaacgagcaatggagctagaaagagctaaggctttg
gagcaggaaaagaaggagagagaaagagctcttgagcaagagaggctacagagggaaata
gctctggaggctgagagaaaggagaaggagaggattgagagagaaaaggctttggagcag
gaaaggttagagagagagaaagccttagagcaagagagactggagagggagaaagcctta
gagcaagagagactagagagggagaaagccttagagcaagagagactagaaatggaaagg
gccctggagaaagagcgactagagaaagaaaaagccatagagcaagagagaattgagaga
gagaaagccatagagcaagagagaattgagaaagagaaagccttagagcaagagagaatt
gaaagagagaaagcattagagcgagagagaattgagagagagaaagaaaggttggagcgg
gagagagccttagaacagaggttagagcaagagaggaaggaaaaggagagaattgagaga
gagaaagcattggagcaagaaaggatagagagggaaaagaccttgcaacgagagaaggag
gaaaaagagagattggagagagaggccgctctggaacaggtgaggaaggagaaggaaaga
gccgaaaaggagaggaaagagaggctggagagagagaaagctttagagcaggagaaactt
gaaaaggagagagccttggagaaggaaagggcactcgaacaagaaaggttaaagaaggag
aaagcaatgcagaaagaaaaggaggagcaggagagggccgtggaacaggagaaagagaga
gctagggggactgaaaaggatagggagagtcacctccctccttccaaacgtggccgtgag
attggtctcacccccctgcccactcctccccccctctccacaggaccaggtagaaagtca
tcgacagaggcaggagagcaagaagatgtccatgctccaatgtcccagcgtgaagcagca
gaatccggtgcacccatgcccgcaacacttccgttgcctcagtcctcattcaagaaattc
cggttcttaagggactccccaattcaactccaatcttcctccccttccatggtcataaag
cggccccgtaacttctctgataccccacagcctcgggcctcgcatgtttcctccctcaca
gacgttggggagcgccagcaggaaggactcccgtcctccactgaacaggacgatccacag
atgcggacaaaacaggaggttgtttccggggccccgggatctgaaggggcccagcctgag
aaggagaccactgttaacaccgcgctggtcccaagtcccaaaaaagaaggggccaccagc
ctagtattggaggacaaagataaagccgattctgtgaagtcggaacaggctgccaaggaa
tccaccaaaaaagcaaaagaagtggatgaaagcaagggtcctacaaacccagtggatact
gcacagcggaggggaagagatgcaaacaaggaagaaaaacaagtaagacaaagatcatcg
tctaatgattcctcttcgtcagaatcggactccgggtcctcgtcttctcggtcctctggc
tcatccacatcctctcaagagaaaacctgctccacttcaagaggcagacgggaaggtaaa
cctaaaagagattcctcaccacagcacagggtgacacaagaggctcatgctgagggttta
aaggaaacaccaaaagcctcccctggcaaaagagagatgtctgtagaaaagagtaacaca
actgctgatggagacagtcacaccaagaaactgttcattgaagcaccaaccagagaggcg
tcacaaaggaagagcaaggacaacgagagagaggcggaaacggacaaacaaaggcagttg
aaggagactgccatggcagagccagagaagcttccagagaccagtgaggagacaccaaag
gccttctcagctcgtaagatctctattagcagcagtaaatcgtccccaggcactggcagt
gcagagggggagcaggaccctggggccgcggccggtcgcaagaggaggtggggctccagc
acagctgtcactgccaagaaaccttccatcagcatcaccacagattcactcaagtctctg
atcccagacattcgcccgtgtctcgggcaggaggcaatagtggacctgcacccagaggaa
gctgtcctctctggtgccgaggacgaagagagggagtgctctgaccaggatcttcagatc
cgtcgcactgtcacacaggtggtgcactcggagagccaggagaatggagagaaagagaca
aagaggagtagacatgaggagttggaggaggatgacccacagggagacagagagatgacg
acaagggtgaatgaagagaagatggacaccgcatttcctggagccgtggaaacccagtct
ccatcacataccagccatgatgtagaaactaacactgtgacccccagcgagaccctcatt
cgccgctccatcagccagcaaaaaacgggtgtttccatcacaatcgatgaccctgttcgc
acagcccggcagccctcaccacctcgcggcaaagtctctaacattgttcatatcagcaac
ctggtgaggccgttcactctggggcagctaaaggaactgctcggcagaactggcaccctg
gtggaggagggcttctggattgacaaaatcaagtctcactgctatgtcacttacggtagc
tcagaggaggcagttgctacacgggcagctcttcatggagtgaaatggcctcagagcaac
ccaaaagtccttaacgtagacttctgccagcaggatgagctggacttccacaaaggcttg
ggtgtagccggcaaacccggagcagaggaacgggcgcctggctctggccgtggtcgaaca
tcggccctgccctctctcctccctgagcgagaccagtgggccgagcgtgagcgagagatg
gagcgccgagagaaggctagagcagagcgggagtgggatcgcgacaaggtcaaagaattt
ggaaaaaccggtgaagagaaggaggaaggtccccggaggtcacgctccagagagaggcgc
cgcaaggagaggggaaagagcaaggagaagaagactgagaagaaggagaaaatggcagag
gatccccctgcaaagctgcttgatgatctgttccgcaaaactaaagcagctccttgcata
tactggcttccacttacagaggaacagtatgtccaacgggaagctgccaaagcagaacgg
atgaaggagcgcgagaaacggaggaaggagcaagatgaagaggaggagaagaaaagggaa
gaggagcgcaaggagagggtgaaagctggaggcggcccaactggagagcgaagtgagggt
gagaaggaaaaggacagggacagagagagggacagagacagaggtagagacagagacagg
gagagggagagggagagggagaatgacaaacgcagggatggctaccgtaggccagagggc
cgtggagccggcgtgggcagacgctcacgcagccgcagcgacccacgagaaaggcgacgt
taa
DBGET
integrated database retrieval system
