Perca flavescens (yellow perch): 114565134
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Entry
114565134 CDS
T07494
Symbol
htt
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflv03019
]
114565134 (htt)
04131 Membrane trafficking [BR:
pflv04131
]
114565134 (htt)
03029 Mitochondrial biogenesis [BR:
pflv03029
]
114565134 (htt)
Messenger RNA biogenesis [BR:
pflv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
114565134 (htt)
Membrane trafficking [BR:
pflv04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
114565134 (htt)
Mitochondrial biogenesis [BR:
pflv03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
114565134 (htt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_GCN1
HEAT_ECM29
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
114565134
NCBI-ProteinID:
XP_028448819
LinkDB
All DBs
Position
2:complement(32250902..32284401)
Genome browser
AA seq
3195 aa
AA seq
DB search
MATMEKLMKAFESLKSFQQQQGPPTAEELVQRQKKEQATTKKDRVTHCLTICENIVAQSL
RTSPEFQKLLGIAMEMFLLCSDDSESDVRMVADECLNKIIKALMDSNLPRLQLELYKEIK
KNGASRSLRAALWRFAELAHLIRPQKCRPYLVNLLPCLSRITKRQEETVQETLAAAMPKI
MAALGHFANDGEIKVLLKSFVANLKSSSPTIRRTAASSAVSVCQHSRRSSYFYTWLLNVL
LGLLIPVDEEHPSHLILGVLLTLRYLMPLLQQQVNTTSLKGSFGVMRKEADVQPTPEQLL
QVYELTLHYAQHWDHNVVTAALELLQQMFRTPPPELLHMLITAGSILHGTVFRQDTESRA
RSGSILELIAGGASSCSPLLLRKPRGKMLSGEEDGLEDDAERTEVTAGAFTAAVVGAEGS
SAAQVDIITEQPRSSQHTLQPGDSVDLSTSSEQGGGGGGTSASDTPESPNDNEEEMLSRS
SSGGANVTPETADYTTPEMEGGPLGAGGTLLGTNDRSLPPSDSSQTTTEGPDSAVTPSDV
AELVLDGSESLYSGMQIGTLQDEEDEGAAPSSQEEPPEPFLQSALALSKPHLFDGRGHNR
QGSDGSVDRFITKDEPAEPEPDSKPSRIKGPIGHYTDQGVEPLVHCVRLLAASFLLTGRK
NGLTPDKEVRVSVKALAVSCVGAAAALHPEAFFNSLYLEPLDGIPIEEQQYITDILGLID
HGDPQIRGATAILCAAIIQAALTKTRYNIHTWLASVQSATGNPLSLVDLVPLLQKTLKDE
SSVTCKMACSAVRHCIMTVCSSTLSEHGLQLLINLLALRDSSYWLVRTELLETLAEMDFR
LVNFLERKTETLHKGDHHYTGRLRLQERVLNDVVICLLGDDDPRVRHVAASAVSRLVSRL
FYDCDQGQVDPVVAIARDQSSVYLQLLMHETQPPSQFTVSTITRTYRGYNLSNNVSDVTI
ENNLSRVVTAVSHAFTSSTSRALTFGCCEALSLLALNFPVCTWSTGWHCGYVSSSSSFSS
RSSLNRSRGRALSVSQPCSAPASSTSSSASDTERRTLTVGMANMVLSLLSSAWFPLDLSS
HQDALLLSGNLLAAVAPKCMRNPWAGEEDGTSGSTNTSGGPNKMEEPWAGLSERSLVAML
EQLFSHLLKILNICAHVLDDTPPGPAVKATLPSLSNTPSLSPIRRKGKEKDVAEPSAAPM
SPKKSNEVNTGRPAESTGSTAVNKSTTLGNFYHLPPYLKLYDVLKATHANYKVTLDLHSS
QEKFGGFLRATLDVLSQLLELATLHDISKCVEEILGYLKSCFSREPTMATVCVQQLLKTL
FGTNLASQCEGILSGPSRSQGKALRLGSSSLRPGLYHYCFMAPYTHFTQALADASLRNMV
QAEQEHDTSGWFDVMQKASNQLRSNIANATRNRGDKNAIHNHIRLFEPLVIKALKQYTTS
TSVALQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRDSEAIIPNIFF
FLVLLSYERYHSKQIISIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGSNKAD
AGKELDTQKEVVVSMLLRLVQHHQVLEMFILVLQQCHKENEDKWKRLSRQIADVILPLIA
KQQMHLDSPEALGVLNTLFETVAPSSLRPVDMLLKSMFTTPVTMASVATVQLWVSGILAV
LRVLISQSTEDIVLSRVHELSLTPHLLSCHTIRRLHQQSPYPCDPPTADELGIREANGEA
QKAVPEETFARFLLQLVGVLLDDISSRQVKVDITEQQHTFYCQQLGTLLMCLIHVFKSGM
FRRITAAATRLLKGEGGGGQTSTEAGLFYPLEGLNSMVQCLITTHPSLVLLWCQVLLIID
YTNYSWWAEVHQTPRRHSHSCTKLLSPHSSGEGEEEKPETRLAMVNREIVRRGALILFCD
YVCQNLHDSEHLTWLIVNHVRDLINLSHEPPVQDFISAVHRNTAASGLFIQAIQSRCDNL
STPNMLKKTLQCLEGIHLSQSGSLLMLYVDKLLSTPFRVLARMVDTLACRRVEMLLAETL
QNSIAQLPVEELDRIQEYLQTSGLAQRHQRFYSLLDRFRATVADTSSPTPPVTSHPLDGD
PPPSPELVIADKEWYVALVKSQCCLRGDVSLLETTELLTKLPPTDLFNIMSCKEFNLSLL
CPCLSMGMQRLARGQGALLLETALQVTLERLAGVTGSLPVPHQSFLPPAQPQPYWSQLAE
VYDEPSFYPRVLSLCRALSQYLLSVSQLPPSLHIPSDKEHLITTFTCTATEVVAWHLLQN
QLPLSVDLQWALSCLCLALQQPCVWNKLSTLEYATQTCSLIYCLRLIIVAVAVSPGDQLL
HPEKKKMKAERDAEGDEVDSAHADHLCEWQACEIMAELVDGLQSILSLGHHRNSAFPAFL
TPTLRNIVISLSRLPLVNSYTRVPPLVWKLGWSPQPGGEYGTTLPEIPVDFLQEKDVFRE
FLYRINTLGWSSRTQFEETWATLLGVLVTQPITMDQEEETQQEEDLERTQLNVLAVQAIT
SLVLSAMTLPTAGNPAVSCLEQQPRNKSLKALETRFGRKLAVIRGEVEREIQALVSKRDN
VHTHHPYHAWDPVPSLLAASAAGTLISHEKLLLQINTEREMGNMDYKLGQVSIHSVWLGN
NITPLREEEWGEDEEDEADTPAPTSPPISPINSRKHRAGVDIHSCSQFLLELYSQWLIPG
SPSNRRTPTILVSEVVRSLLAVSDLFTERNQFDMMFSTLMELQKLHPPEDEILNQYLVPA
ICKAAAVLGMDKAIAEPVCRLLETTLRSTHLPSRMGALHGVLYVLECDLLDDTAKQLIPT
VSEYLLSNLRAIAHCVNLHNQQHVLVMCAVAFYMMENYPLDVGAEFMAGIIQLCGVMVSA
SEDATPSVIYHCVLRGLERLLLSEQLSRVDGEALVKLSVDRVNMPSPHRAMAALGLMLTC
MYTAVLASGSDVTGVRGQVDSGSAVAEAVGVTAGHVGFSSGKEKASPAGRPAHSDPQAPD
SESIIVAMERVSVLFDRIRKGLPSEARVVSRILPQFLDDFFPPQDVMNKVIGEFLSNLQP
YPQFMATVVYKVFQTLHATGQSSMVRDWVLLSLSNFTQRTPVAMAMWSLSCFFVSASTSQ
WISALLPHVISRMGSSEVVDVNLFCLVAMDFYRHQIDEELDRRAFQSVFETVASPGSPYY
QLLGCLQSIHQDTSL
NT seq
9588 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatggagaaattgatgaaggcctttgagtctctgaagtcattccagcagcaa
cagggaccaccgaccgccgaggagcttgtccagaggcagaaaaaggaacaggctaccaca
aagaaggacagggtcacccactgcctgacaatttgtgaaaacattgtggctcagtctctg
agaacgtctccagagtttcagaaactgctgggcattgccatggagatgttcctgctctgc
agtgatgacagtgaatcagatgtccggatggtagccgatgagtgcctgaacaaaatcatc
aaagcactgatggactccaacctgcctagactgcagctggagctgtataaagaaattaaa
aagaacggtgcctctcggagtttgagggcagctttgtggaggtttgctgagcttgcgcat
ctcattagacctcagaaatgcagaccctacctggttaacctgttgccatgcctctcccga
atcaccaagcggcaggaggagaccgtacaggagactctggctgccgcaatgcccaagatc
atggccgccttgggacacttcgccaatgatggcgagatcaaggtgctgctgaagtcattt
gtggccaacctgaagtccagctcccccaccatcagacggacggcagccagctcagccgtc
agtgtgtgccaacactccagacgcagcagctacttctacacctggctccttaatgtgctg
ctgggtctgctgattccagtggatgaggagcaccccagccacctaattctgggggtgctg
ttaacccttcgctacctgatgcctctgctgcagcagcaagtgaacaccaccagcctcaaa
ggaagctttggagtcatgaggaaggaggctgatgtacagccaacacctgaacaactgcta
caggtgtacgagctgaccttgcactacgcacagcactgggatcacaatgtggtcacggca
gctctggagctcctgcagcagatgttcaggactcccccaccagagcttctgcacatgctc
atcaccgcaggcagcattctacatggcaccgtgttccgccaggacactgagagccgcgcg
cgctccggcagcatcctcgagctcattgcaggtggagcttcttcctgcagtccactcctt
ctcaggaaaccgagaggtaaaatgctctctggggaggaggatgggttggaggatgacgct
gagagaacagaggtcaccgctggtgccttcacagcggcagttgttggtgcagaaggctcc
tccgcagcccaggtggacatcatcacagagcagccgcgctcctcccagcataccctgcag
cctggagactcagtggacctcagtacctcctcagagcagggcggcggcggaggcgggaca
tctgcatcagacactcctgagtcgcccaacgacaacgaggaggaaatgctgagtcggagc
tccagtggtggggccaacgttactccagagacggctgactacactacaccagagatggag
ggagggcccttaggtgcaggtgggactctgctaggcactaacgatcgctcccttccaccc
agcgactcctcccagaccaccacagagggaccagactccgctgtcaccccttcggacgta
gcagaactggtgctggatggcagtgagagcctgtactctgggatgcagatcgggacattg
caggatgaagaagatgaaggagcagcaccttcctcccaagaagaacccccagaaccattc
ctgcagtcagccctggctctgagcaagcctcatctctttgatggccgaggtcacaaccgg
cagggttcagacggcagtgtggaccgcttcataacaaaggacgaacctgctgaacccgaa
cctgacagcaagccatcacggataaagggtccgatcggacattatacagaccagggggtg
gagccactggtgcactgtgtaaggcttcttgcagcttcattcttactgaccggacgaaaa
aatggtctgacccctgacaaggaggtgcgagtgagcgtgaaggccctggcagtcagctgt
gttggggcagcagcagcgctgcatcctgaagccttctttaattccctctacttggagccg
ctggatggcattccaatagaagagcagcagtatatcactgacatcctgggtctcatcgac
catggggacccccagatcagaggtgccacagccatcctctgtgcagccatcatacaagcc
gcactcaccaaaacacgttacaacatacacacctggctggccagtgtgcagagtgcaaca
ggtaaccctctgtccctggtggacttggtgcctttgctccagaaaactctgaaagatgaa
tcttccgtcacctgcaagatggcttgctctgcagtgaggcactgcatcatgactgtgtgc
agcagtaccttgagcgagcatggcctgcagttgctgataaaccttcttgctctgagggac
tcgtcctattggcttgttcgcactgagctcttggagaccctggctgagatggacttccgg
ttagttaatttcctggagaggaaaactgagactttgcacaaaggggatcatcactacact
gggcggctgcggctacaggagagagtcctgaatgatgtggtcatctgtctgttgggagat
gatgaccccagagtccgacatgtggcagcatctgctgtcagcaggctagtttccaggttg
ttctatgattgtgaccagggtcaagtggacccagtagtggctattgcccgggaccagagt
tcagtctacctgcagctgctgatgcatgagacccaacccccctcccagttcacagttagt
acaatcacaaggacgtacagaggctacaacttgtccaacaatgtgtcggatgtgacaatc
gagaacaatttgtccagagtcgtcactgccgtctcccatgctttcacctcctctacctcc
agggccctgacttttggctgctgtgaggccttgtccctcctggctttaaatttcccagtg
tgcacttggagtacaggctggcactgtggctatgtcagctccagtagcagcttttcttcc
cgctctagtctcaaccgcagcaggggcagggccctcagtgtgtcacagccatgtagtgct
ccagcctcttcaacctcctcatctgcatcagacaccgagcggaggactctgaccgtagga
atggccaacatggtcctatccttactgtcttctgcttggtttccactggatctctcttca
caccaggatgcacttttgctttctggcaatctgcttgctgctgtggctcctaaatgcatg
cgcaacccctgggctggagaggaagacggcaccagtggtagcacaaacaccagcggaggc
ccaaataagatggaggaaccctgggcagggttgtctgagcgctccctggtggccatgttg
gagcaactcttctctcacctactgaagatcctcaacatctgtgcccatgtgctggatgac
acgccacctggaccagcggttaaggccaccctcccctccttgagcaacaccccctccctc
agtcccatccggagaaaaggcaaggagaaggatgtcgctgagcccagtgctgccccaatg
agcccaaagaaaagtaatgaggtcaacacaggcaggccagcagaaagcactgggtcaaca
gctgtgaacaaatctaccacccttggcaacttctaccaccttccaccctacctcaagctc
tatgatgtccttaaagctacacatgccaactacaaggtaacactggacctccacagtagc
caggagaagtttggaggtttcctgcgtgccactctagatgttctatcccagctcctggag
ctggccacactacatgacatcagcaagtgtgtggaggaaatcttaggctaccttaagtcc
tgcttctccagggaaccaaccatggctacagtttgtgtacaacagctgttgaagaccctg
tttggcaccaacctggcctctcagtgcgagggcatcctgagtggacccagccgttcccag
ggcaaggccctccgtcttggatcgtccagtctgcgaccaggcctctaccactactgcttc
atggcgccgtacactcacttcactcaggctctcgccgatgccagtctccgtaacatggtg
caggctgaacaggagcacgacacctctggatggtttgatgtgatgcaaaaagcttcaaac
cagctgaggtccaacattgcaaatgctacacgcaacagaggagacaagaatgccatccac
aaccacattcgtctgtttgagccgctggtgatcaaagctttaaagcagtacactaccagc
acgtctgtggccctgcagagacaagtgctggacctgcttgctcaacttgttcagcttagg
gtcaactactgcctgctggactcggatcaggtgttcataggctttgtcctgaagcagttt
gagtacattgaagtgggacagttcagggattcggaggccatcattcccaacatatttttc
ttcctggttctgttgtcatatgagcgttaccactccaagcagataatcagcatccccaag
atcattcagctgtgtgacggcatcatggcgagcggcaggaaagcggtcacacatgccatc
ccggccttgcagccaatagtccacgacctgtttgtgttgaggggctctaacaaagcagat
gcaggcaaagagctggatacacagaaagaagtggtggtctccatgctgctcagacttgtg
caacaccatcaggtgttggagatgttcatccttgtactgcagcagtgtcacaaagagaac
gaggacaagtggaagagattgtccaggcagattgctgacgtcatacttcccctgattgct
aagcagcagatgcacctggactctccggaggcgttgggagtgttgaacactctgtttgag
actgtggcgccctcctccctcagacctgtagacatgctgctcaagagtatgttcaccacc
ccggtcaccatggcatcagtagctacagtccagctgtgggtgtctggtatcctggcagtg
ctcagggtacttatctcccagtccactgaggacattgtcctgtcacgggtccacgaactc
tccctcaccccgcatctcctctcctgccacacaatccgtcgcctgcatcagcagagcccc
tacccatgtgacccacccactgccgacgaactcggcatccgggaagctaatggcgaggca
caaaaagccgtgcctgaggaaacctttgccaggtttctgctccagctggtaggagtgttg
ctggatgacatttcctccagacaggttaaagtggacattacagagcagcaacacactttc
tactgccagcagctgggcacactgctcatgtgtctcatacatgtcttcaaaagtgggatg
tttcgcaggatcacggctgcagcgacccgtctcctgaagggggagggtggaggtggacag
acgagcaccgaggccggcctgttttaccccttagagggtctgaacagcatggtgcagtgc
ctgatcaccacccacccctccttggtgctgctgtggtgccaggtcctcctcatcatcgac
tacaccaactactcctggtgggctgaggtgcaccagacacccaggagacatagccactcg
tgcacaaagctgctgagccctcactcctcaggggaaggagaagaggaaaagcctgagact
cggttagctatggtcaaccgagagattgtacgcaggggagccctcatcctcttctgtgac
tatgtgtgtcagaaccttcatgactcggagcatctgacctggctgattgtcaaccacgtg
cgtgacctcatcaacctttcccatgagcctccagtgcaagatttcatcagcgctgtgcac
cgcaacacagctgccagtggtctcttcatccaggccatccagtcccgctgtgacaacctc
agtactcctaacatgttgaagaagactctgcagtgtttggaaggcatccacctgagtcag
tctggctccctgctgatgctgtatgtggacaagctgctcagtacacccttcagggttcta
gctcgcatggtggacacactggcctgtcgcagggtagagatgctgttggctgagacacta
cagaacagtatagctcagctgcctgtggaggaactagacaggatccaggaatacctccag
accagtggcctggctcagaggcatcagaggttctactccctgctggacaggttcagagcc
actgtcgccgacaccagcagccccacacctcctgtgacatcacacccattagacggggat
ccaccaccttcccctgagctggtcattgcagataaggagtggtacgtggctctggtgaag
tctcagtgttgtcttcgtggagatgtttccctgttggagacgacggaactcctcaccaaa
ctacctcccactgacctctttaacatcatgagctgcaaggagttcaacctaagcctgctg
tgcccatgcctaagtatgggcatgcagcggttagcacggggtcagggggcgctcttgttg
gagacggccttgcaggtgaccctagagcggctcgcaggagtcaccgggtcacttcctgtc
ccacaccagtccttcctgccacccgcccagcctcagccctactggagccaactggctgaa
gtgtatgatgagccaagtttctaccccagggttttgtcgctctgcagagctctgtcccag
tacctgctgagtgtaagccagctgcctccatcactacatatcccctctgacaaggaacac
ctcatcaccactttcacctgcactgccacggaggttgtagcgtggcatctcctccagaac
cagttgcccctgagtgtggacctgcagtgggctctgtcctgcctgtgtctggccctgcag
cagccctgcgtgtggaacaagctctccaccctagagtacgctacacaaacctgctccctc
atttactgcctacgcctgattattgttgcagtggctgttagtcctggtgaccagcttctg
catccagagaagaaaaaaatgaaggcagagcgagacgccgaaggagatgaagtggactcg
gcacatgctgaccacctgtgtgagtggcaagcatgtgagatcatggcggagctggtggac
ggcctgcagagcatcctttcccttggtcaccatagaaacagtgcattccccgcctttctc
acaccaaccttacgcaacattgtcatcagtctgtcccgactgcctctggtcaacagctac
acccgagtacctccactggtttggaaactgggctggtcccctcagccaggaggagagtac
ggcacaacgctgcctgagatcccggtcgacttcctgcaggaaaaggatgtcttcagagag
ttcctctaccgcatcaacacactgggctggagcagcaggactcagtttgaggagacctgg
gccacactgctgggggtgctggtcactcaacccataactatggaccaggaggaggagact
cagcaggaggaggacttggagcgtacccagttgaatgtgttggcagtgcaggccatcacc
agcctggtgctgagtgccatgactctgcccactgctggcaaccctgcagtcagctgtctg
gaacagcagccccgcaacaagagcctcaaagccctagaaacacggtttgggaggaaactt
gcagtgatcaggggcgaggtggagcgagagattcaggctcttgtgtctaagagggacaat
gttcatacacaccatccgtaccacgcctgggatcctgtaccctcgctgttggcagcctca
gctgcaggcacgctgatcagccatgagaagctgctacttcagatcaacacagagagggag
atgggcaacatggactacaaactgggacaggtctccattcactcagtgtggttaggtaac
aacatcaccccattgagggaggaagagtggggtgaggatgaagaagatgaagcagacact
ccagcccccacctccccacccatatctcccatcaactctaggaagcatcgtgcaggcgtg
gacattcattcgtgttcccagtttctgctggagctctacagccagtggctgatccccggc
tccccgagtaaccggaggaccccgaccatcctcgtcagtgaagtggttcgatcgctgctg
gcggtgtcggacctgttcacagagcggaaccagtttgacatgatgttctccaccctgatg
gaactgcagaagctccacccgccagaggatgagatcctcaatcaatacctggtgcctgcc
atctgcaaggctgctgccgttctgggcatggacaaagcaatagcggagcctgtgtgtcgc
ctgttggagaccaccctgcgcagcacccacctgcccagccgcatgggggccctacatgga
gtgctgtatgtgttggagtgtgacttgctggatgacaccgccaaacagctcattcccacc
gtctctgagtaccttctgtccaacctccgggctatcgctcactgtgtgaacctgcataac
cagcagcatgtgttggtaatgtgcgcagtggctttctacatgatggagaactaccctctg
gatgtaggagctgagtttatggctggaattatacagttgtgtggtgtgatggtgtcggcc
agcgaggacgccactccctccgtcatctatcactgtgtgctgcgcggtctggagcgcctc
ctgctgtcagagcagttgtcccgtgtggacggagaagcgctggtcaaactcagcgtggac
cgagtcaacatgccgtcgccacacagagccatggctgccctgggcctcatgctcacctgc
atgtacactgcggtgcttgcgtcgggttcagacgtgacaggggttagaggtcaggttgac
tctggctctgccgtagcagaggcggtgggcgtcacggcaggtcatgttggtttctcctca
ggcaaggagaaagccagccctgccggtcgccccgcccactctgaccctcaggccccagac
agcgagtcgatcattgttgccatggagagggtctctgtgctcttcgacaggatccggaaa
ggtttacctagcgaagctcgggtggtgtccaggattctgccccagtttctggacgacttc
ttcccgccacaggatgtcatgaacaaggtcatcggcgagttcctgtccaatctgcaacct
tacccacaattcatggccactgtcgtctacaaggtttttcagacacttcatgcaacaggc
cagtcgtctatggtgcgagactgggtgctgctgtccttgtccaacttcactcagcggacc
ccagtggccatggccatgtggagcctctcctgtttctttgtctctgcatccacctcccag
tggatctcagccctactgccacacgtgatcagccgtatgggctctagtgaggtggtggac
gtcaacctgttctgtctggtggccatggacttctaccggcaccagattgacgaggagctg
gaccgcagggccttccagtccgtctttgagacggtggcctcaccaggcagcccttattac
cagctgctgggctgtctgcagtcaatccaccaggacacatcactctga
DBGET
integrated database retrieval system
