Perca flavescens (yellow perch): 114565153
Help
Entry
114565153 CDS
T07494
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3-like
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
114565153
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pflv02000
]
114565153
Transporters [BR:
pflv02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
114565153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
114565153
NCBI-ProteinID:
XP_028448842
LinkDB
All DBs
Position
12:complement(2881965..2907289)
Genome browser
AA seq
590 aa
AA seq
DB search
MEDFPDLQMNKARRRREDQRSAAARGQWASKTEYILVVAGNVVGLGNVWRFPYLCYKNGG
GAFLVPYGLLAVVCGIPLFLLETSVGQFTQEGFITSWRNVCPLAQGIGYGQLTISVCFFI
YILIEAWAVFYLVFSFRSQLPWASCDNTWNTDNCLGLQTFTSSNVTANQTNTTSAATEFW
ERRVLGVSGGIEELGSVRWELALCLLACWVICYFSIWKGVRSSGKVVYFTATFPYVMLLI
LLIRGLTLPGAREGIYYYLYPDLNRLANLEVWIEAGSQIFFSYSLTAGTLHVLGSYNEYN
NNCYMDCFWLCLLNSGTSFVAGFVVFSVLGFMAQKQGVSVDTVVESGPSLAFIAYPQATA
LMPFPQFWTACFFLMLILLTIDTHFVIVESFITTVTDLFPKWFRAPLRHEIFVLAVCVSS
FLIQLTLVTEGGIYIFQLIDFYGSTRVSQNFMAICECLAVGWIFGADRLSDIIEDMTGQR
PSIFFKLCWKYFIPLLSLITLILYLIDYKALKFNDWYVYPDWAYALGWTMTLSSVLMVPL
WAAGQMCLTAGTFRQRLSVLCRPAEDPAWQRRAMGEEGTTVELRTSAVTT
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggaagacttccctgatcttcagatgaacaaagccagaagaagaagagaagatcagaga
agtgctgcagccagaggacagtgggccagtaaaacagaatatattctggttgttgcagga
aatgtggtcggcctgggcaacgtgtggagatttccttacctctgctacaagaacggtgga
ggggcctttctggtgccgtatggtctgttagctgtggtgtgtgggatacctctgttcctg
ttggagacttcagttggtcagttcacccaggaaggattcatcacttcttggaggaatgtg
tgtccactggctcaaggaattggatatggacaactgacgatttcagtctgtttcttcatc
tacattttaattgaagcttgggctgtcttctacctggtgttctcgttcagatcccagctg
ccctgggccagctgtgacaacacctggaacacggataactgtcttggtctacagactttc
acttcatctaatgtgactgcaaatcagaccaacaccacctctgctgcaactgagttctgg
gaacggcgtgtgctgggcgtgtctggaggcattgaggagctgggcagtgtgagatgggag
ctggctttgtgtcttctggcctgctgggtgatctgctacttcagcatctggaaaggtgtc
agatcttctggaaaggtagtgtatttcacagccacgttcccctacgtgatgctcctgata
ctgctgatcaggggcttgactctacctggagctcgggaagggatctactactacctgtat
ccagacctgaaccgcctggctaacctggaggtctggatagaagcaggatctcaaatattt
ttctcctacagcctgactgcagggactctgcatgtcctgggcagctataatgagtacaac
aacaactgttacatggactgcttttggctctgtctgctgaacagtgggaccagttttgtt
gctggatttgtcgtcttctctgtacttggattcatggctcagaaacagggtgttagtgtt
gacactgtggtagagtcaggtccaagtttggccttcattgcttaccctcaggcaacagct
ctgatgccttttccacagttctggacagcctgcttcttcctgatgctcattctgctgact
atcgacacacattttgtgatagtggagagttttatcaccacggtgaccgatttgtttcca
aagtggtttcgtgcaccattgaggcacgagatctttgtcctcgccgtctgtgtctccagc
ttcctcatacagcttaccttggttacagagggaggaatttacatattccaactcattgac
ttctacggctctaccagagtcagtcagaattttatggctatttgtgaatgcctggctgtg
ggctggatatttggtgctgaccgcctttccgacatcatagaggacatgacaggacagaga
ccatcaattttctttaaactctgctggaaatacttcattcctcttctgtcactgatcacc
ttaatcctgtacctgattgattacaaagccctcaagtttaacgactggtacgtttaccct
gactgggcgtatgctctaggatggaccatgaccctctcctctgttctcatggtgccactg
tgggcagctggacagatgtgtttgacagcaggaaccttcagacagcgtttgtctgtcctc
tgtcgtcctgctgaagatccagcctggcagaggagagccatgggagaggagggaacaact
gttgaactgaggacgtctgcagtgaccacttag
DBGET
integrated database retrieval system
